RNA–Protein interactions for RNA: ENST00000448535.1

AC009963.4-201, humanhuman

BASIC

Gene AC009963.4, Length 339 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009963.4-201ENST00000448535 AEBP2Q6ZN18 517 aaPredicted RBP26.17■■□□□ 1.78
AC009963.4-201ENST00000448535 CHIC1Q5VXU3 224 aa25.89■■□□□ 1.74
AC009963.4-201ENST00000448535 PHF23Q9BUL5 403 aaPredicted RBP22.7■■□□□ 1.22
AC009963.4-201ENST00000448535 SENP3Q9H4L4 574 aaPredicted RBP22.34■■□□□ 1.17
AC009963.4-201ENST00000448535 PLPPR3Q6T4P5 718 aa21.2■□□□□ 0.98
AC009963.4-201ENST00000448535 FOXD1Q16676 465 aa20.6■□□□□ 0.89
AC009963.4-201ENST00000448535 ADRA2BP18089 450 aa20.03■□□□□ 0.8
AC009963.4-201ENST00000448535 PPP6R1Q9UPN7 881 aa19.95■□□□□ 0.78
AC009963.4-201ENST00000448535 PIAS4Q8N2W9 510 aaPredicted RBP19.6■□□□□ 0.73
AC009963.4-201ENST00000448535 MSH5O43196 834 aa19.02■□□□□ 0.64
AC009963.4-201ENST00000448535 PPP4R3CPQ6ZMV5 832 aa18.68■□□□□ 0.58
AC009963.4-201ENST00000448535 KCNA4P22459 653 aa18.49■□□□□ 0.55
AC009963.4-201ENST00000448535 SCAF1Q9H7N4 1312 aaKnown RBP18.48■□□□□ 0.55
AC009963.4-201ENST00000448535 NCBP3Q53F19 620 aaKnown RBP18.37■□□□□ 0.53
AC009963.4-201ENST00000448535 CNKSR2Q8WXI2 1034 aa18.12■□□□□ 0.49
AC009963.4-201ENST00000448535 MAPK8IP2Q13387 824 aaPredicted RBP18.06■□□□□ 0.48
AC009963.4-201ENST00000448535 NPM3O75607 178 aaKnown RBP17.96■□□□□ 0.47
AC009963.4-201ENST00000448535 DMRT2Q9Y5R5 561 aa17.8■□□□□ 0.44
AC009963.4-201ENST00000448535 POTEDQ86YR6 584 aa17.78■□□□□ 0.44
AC009963.4-201ENST00000448535 SLC4A1APQ9BWU0 796 aaKnown RBP17.74■□□□□ 0.43
AC009963.4-201ENST00000448535 RNF216Q9NWF9 866 aaPredicted RBP17.68■□□□□ 0.42
AC009963.4-201ENST00000448535 EHMT2Q96KQ7 1210 aa17.54■□□□□ 0.4
AC009963.4-201ENST00000448535 HOXD11P31277 338 aaPredicted RBP17.5■□□□□ 0.39
AC009963.4-201ENST00000448535 DNAJC5BQ9UF47 199 aa17.31■□□□□ 0.36
AC009963.4-201ENST00000448535 DCAF8L1A6NGE4 600 aa17.21■□□□□ 0.35
AC009963.4-201ENST00000448535 CSRNP3Q8WYN3 585 aa17.08■□□□□ 0.32
AC009963.4-201ENST00000448535 FOXD4L1Q9NU39 408 aa17.02■□□□□ 0.32
AC009963.4-201ENST00000448535 ZBTB22O15209 634 aa16.93■□□□□ 0.3
AC009963.4-201ENST00000448535 SLC4A2P04920 1241 aa16.84■□□□□ 0.29
AC009963.4-201ENST00000448535 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.84■□□□□ 0.29
AC009963.4-201ENST00000448535 MYCNP04198 464 aaPredicted RBP16.67■□□□□ 0.26
AC009963.4-201ENST00000448535 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.49■□□□□ 0.23
AC009963.4-201ENST00000448535 HNRNPUL2Q1KMD3 747 aaKnown RBP16.49■□□□□ 0.23
AC009963.4-201ENST00000448535 U3KPZ7 1027 aaPredicted RBP16.46■□□□□ 0.23
AC009963.4-201ENST00000448535 SAMD1Q6SPF0 538 aaPredicted RBP16.41■□□□□ 0.22
AC009963.4-201ENST00000448535 ATXN8OSP0DMR3 200 aa16.38■□□□□ 0.21
AC009963.4-201ENST00000448535 APLP2Q06481 763 aa16.31■□□□□ 0.2
AC009963.4-201ENST00000448535 RNF39Q9H2S5 420 aa16.23■□□□□ 0.19
AC009963.4-201ENST00000448535 C1QBPQ07021 282 aaKnown RBP16.12■□□□□ 0.17
AC009963.4-201ENST00000448535 ATF5Q9Y2D1 282 aaPredicted RBP16.07■□□□□ 0.16
AC009963.4-201ENST00000448535 CAPN15O75808 1086 aa15.99■□□□□ 0.15
AC009963.4-201ENST00000448535 ZNF219Q9P2Y4 722 aaPredicted RBP15.97■□□□□ 0.15
AC009963.4-201ENST00000448535 TRHP20396 242 aaPredicted RBP15.96■□□□□ 0.15
AC009963.4-201ENST00000448535 SPINK5Q9NQ38 1064 aaPredicted RBP15.94■□□□□ 0.14
AC009963.4-201ENST00000448535 CACNB1Q02641 598 aaPredicted RBP15.76■□□□□ 0.11
AC009963.4-201ENST00000448535 POLA2Q14181 598 aa15.69■□□□□ 0.1
AC009963.4-201ENST00000448535 ABCB7O75027 752 aa15.65■□□□□ 0.1
AC009963.4-201ENST00000448535 FBLN2P98095 1184 aa15.6■□□□□ 0.09
AC009963.4-201ENST00000448535 FKBP8Q14318 412 aa15.55■□□□□ 0.08
AC009963.4-201ENST00000448535 ZBTB12Q9Y330 459 aaPredicted RBP15.54■□□□□ 0.08
AC009963.4-201ENST00000448535 DSG3P32926 999 aa15.53■□□□□ 0.08
AC009963.4-201ENST00000448535 MKRN4PQ13434 485 aaPredicted RBP15.39■□□□□ 0.05
AC009963.4-201ENST00000448535 SPDYE4A6NLX3 237 aa15.29■□□□□ 0.04
AC009963.4-201ENST00000448535 OSCARQ8IYS5 282 aa15.16■□□□□ 0.02
AC009963.4-201ENST00000448535 SPDYE2BA6NHP3 402 aa15.09■□□□□ 0.01
AC009963.4-201ENST00000448535 SPDYE6P0CI01 402 aa15.09■□□□□ 0.01
AC009963.4-201ENST00000448535 SPDYE2Q495Y8 402 aa15.09■□□□□ 0.01
AC009963.4-201ENST00000448535 ZNF692Q9BU19 519 aaPredicted RBP15.08■□□□□ 0
AC009963.4-201ENST00000448535 FBXO3Q9UK99 471 aa14.99□□□□□ -0.01
AC009963.4-201ENST00000448535 RBM42Q9BTD8 480 aaKnown RBP14.94□□□□□ -0.02
AC009963.4-201ENST00000448535 PROM2Q8N271 834 aa14.92□□□□□ -0.02
AC009963.4-201ENST00000448535 SSUH2Q9Y2M2 353 aa14.91□□□□□ -0.02
AC009963.4-201ENST00000448535 PABPN1Q86U42 306 aaKnown RBP eCLIP14.87□□□□□ -0.03
AC009963.4-201ENST00000448535 AKT1S1Q96B36 256 aa14.74□□□□□ -0.05
AC009963.4-201ENST00000448535 STAG3Q9UJ98 1225 aa14.73□□□□□ -0.05
AC009963.4-201ENST00000448535 VASPP50552 380 aaPredicted RBP14.71□□□□□ -0.05
AC009963.4-201ENST00000448535 AMER1Q5JTC6 1135 aaPredicted RBP14.63□□□□□ -0.07
AC009963.4-201ENST00000448535 SPDYE1Q8NFV5 336 aaPredicted RBP14.62□□□□□ -0.07
AC009963.4-201ENST00000448535 PLCD3Q8N3E9 789 aa14.57□□□□□ -0.08
AC009963.4-201ENST00000448535 CLEC11AQ9Y240 323 aa14.57□□□□□ -0.08
AC009963.4-201ENST00000448535 PLEKHG5O94827 1062 aa14.56□□□□□ -0.08
AC009963.4-201ENST00000448535 REM2Q8IYK8 340 aaPredicted RBP14.56□□□□□ -0.08
AC009963.4-201ENST00000448535 MIER1Q8N108 512 aa14.53□□□□□ -0.08
AC009963.4-201ENST00000448535 KLHL34Q8N239 644 aa14.51□□□□□ -0.09
AC009963.4-201ENST00000448535 RTN4Q9NQC3 1192 aaKnown RBP14.5□□□□□ -0.09
AC009963.4-201ENST00000448535 PRR29P0C7W0 189 aa14.45□□□□□ -0.1
AC009963.4-201ENST00000448535 IFNLR1Q8IU57 520 aaPredicted RBP14.45□□□□□ -0.1
AC009963.4-201ENST00000448535 ZBTB47Q9UFB7 747 aaPredicted RBP14.41□□□□□ -0.1
AC009963.4-201ENST00000448535 PITPNM1O00562 1244 aa14.38□□□□□ -0.11
AC009963.4-201ENST00000448535 SPOCK2Q92563 424 aa14.34□□□□□ -0.11
AC009963.4-201ENST00000448535 CREBZFQ9NS37 354 aa14.2□□□□□ -0.14
AC009963.4-201ENST00000448535 CHRDL2Q6WN34 429 aa14.15□□□□□ -0.14
AC009963.4-201ENST00000448535 CIZ1Q9ULV3 898 aaPredicted RBP14.14□□□□□ -0.15
AC009963.4-201ENST00000448535 NPM1P06748 294 aaKnown RBP eCLIP14.13□□□□□ -0.15
AC009963.4-201ENST00000448535 CHADLQ6NUI6 762 aa14.1□□□□□ -0.15
AC009963.4-201ENST00000448535 DCAF8L2P0C7V8 631 aa14.07□□□□□ -0.16
AC009963.4-201ENST00000448535 PRKAR2AP13861 404 aaKnown RBP14.07□□□□□ -0.16
AC009963.4-201ENST00000448535 ECM2O94769 699 aaPredicted RBP14.05□□□□□ -0.16
AC009963.4-201ENST00000448535 PKD2Q13563 968 aa14.04□□□□□ -0.16
AC009963.4-201ENST00000448535 GSE1Q14687 1217 aa14.04□□□□□ -0.16
AC009963.4-201ENST00000448535 FAM212AQ96EL1 285 aa14.04□□□□□ -0.16
AC009963.4-201ENST00000448535 FXR2P51116 673 aaKnown RBP eCLIP14.03□□□□□ -0.16
AC009963.4-201ENST00000448535 DCAF8Q5TAQ9 597 aa14.03□□□□□ -0.16
AC009963.4-201ENST00000448535 MNX1P50219 401 aaPredicted RBP14.02□□□□□ -0.17
AC009963.4-201ENST00000448535 NUBP1P53384 320 aa14□□□□□ -0.17
AC009963.4-201ENST00000448535 FARP1Q9Y4F1 1045 aaPredicted RBP14□□□□□ -0.17
AC009963.4-201ENST00000448535 TRIM41Q8WV44 630 aa13.98□□□□□ -0.17
AC009963.4-201ENST00000448535 PIP4P2Q8N4L2 257 aa13.97□□□□□ -0.17
AC009963.4-201ENST00000448535 RASEFQ8IZ41 740 aa13.91□□□□□ -0.18
AC009963.4-201ENST00000448535 PAK3O75914 559 aaPredicted RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 129.3 ms