RNA–Protein interactions for RNA: ENST00000448394.2

RANBP1-211, Transcript of RAN binding protein 1, humanhuman

TSL 2

Gene RANBP1, Length 688 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP1-211ENST00000448394 EIF4G2P78344 907 aaKnown RBP eCLIP20.31■□□□□ 0.842e-20■■■■■ 117.5
RANBP1-211ENST00000448394 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.51□□□□□ -0.258e-18■■■■■ 107.1
RANBP1-211ENST00000448394 GTF2F1P35269 517 aaKnown RBP eCLIP15.75■□□□□ 0.114e-11■■■■■ 100.5
RANBP1-211ENST00000448394 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.78□□□□□ -0.24e-8■■■■■ 81.8
RANBP1-211ENST00000448394 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.08■□□□□ 02e-10■■■■■ 75.6
RANBP1-211ENST00000448394 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.5■□□□□ 0.074e-16■■■■■ 74.2
RANBP1-211ENST00000448394 EWSR1Q01844 656 aaKnown RBP eCLIP10.75□□□□□ -0.693e-17■■■■■ 71.9
RANBP1-211ENST00000448394 FUSP35637 526 aaKnown RBP eCLIP9.59□□□□□ -0.879e-12■■■■■ 44.9
RANBP1-211ENST00000448394 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.48■□□□□ 0.071e-6■■■■■ 42.4
RANBP1-211ENST00000448394 SF3B4Q15427 424 aaKnown RBP eCLIP13.16□□□□□ -0.36e-29■■■■■ 41.6
RANBP1-211ENST00000448394 TIA1P31483 386 aaKnown RBP eCLIP13.54□□□□□ -0.245e-9■■■■■ 39.9
RANBP1-211ENST00000448394 PCBP2Q15366 365 aaKnown RBP eCLIP13.77□□□□□ -0.217e-7■■■■■ 36.9
RANBP1-211ENST00000448394 PABPC4Q13310 644 aaKnown RBP eCLIP17.27■□□□□ 0.363e-31■■■■■ 35.4
RANBP1-211ENST00000448394 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.3□□□□□ -0.121e-10■■■■■ 35.3
RANBP1-211ENST00000448394 TARDBPQ13148 414 aaKnown RBP eCLIP14.25□□□□□ -0.131e-6■■■■■ 34.7
RANBP1-211ENST00000448394 DDX21Q9NR30 783 aaKnown RBP eCLIP18.76■□□□□ 0.593e-6■■■■■ 34.3
RANBP1-211ENST00000448394 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.4□□□□□ -0.11e-7■■■■■ 34.3
RANBP1-211ENST00000448394 SUB1P53999 127 aaKnown RBP eCLIP11.09□□□□□ -0.634e-29■■■■■ 33.8
RANBP1-211ENST00000448394 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.88■□□□□ 0.299e-9■■■■■ 32.4
RANBP1-211ENST00000448394 AATFQ9NY61 560 aaKnown RBP eCLIP17.6■□□□□ 0.411e-45■■■■■ 31.9
RANBP1-211ENST00000448394 SF3B1O75533 1304 aaKnown RBP eCLIP15.79■□□□□ 0.122e-6■■■■■ 31
RANBP1-211ENST00000448394 FTOQ9C0B1 505 aaKnown RBP eCLIP16.29■□□□□ 0.21e-8■■■■■ 30.6
RANBP1-211ENST00000448394 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.79■□□□□ 0.121e-8■■■■■ 30
RANBP1-211ENST00000448394 DKC1O60832 514 aaKnown RBP eCLIP16.3■□□□□ 0.21e-323■■■■■ 29.5
RANBP1-211ENST00000448394 AKAP1Q92667 903 aaKnown RBP eCLIP12.67□□□□□ -0.382e-6■■■■■ 27.8
RANBP1-211ENST00000448394 SMNDC1O75940 238 aaKnown RBP eCLIP12.97□□□□□ -0.333e-10■■■■■ 27.5
RANBP1-211ENST00000448394 RBFOX2O43251 390 aaKnown RBP eCLIP11.36□□□□□ -0.593e-9■■■■■ 27.5
RANBP1-211ENST00000448394 PRPF4O43172 522 aaKnown RBP eCLIP13.82□□□□□ -0.24e-7■■■■■ 27.2
RANBP1-211ENST00000448394 RBM5P52756 815 aaKnown RBP eCLIP17.82■□□□□ 0.441e-19■■■■□ 25.8
RANBP1-211ENST00000448394 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.91■□□□□ 0.32e-7■■■■□ 25.7
RANBP1-211ENST00000448394 AARSP49588 968 aaKnown RBP eCLIP15.67■□□□□ 0.15e-7■■■■□ 24.8
RANBP1-211ENST00000448394 ZRANB2O95218 330 aaKnown RBP eCLIP14.68□□□□□ -0.064e-7■■■■□ 24.6
RANBP1-211ENST00000448394 WRNQ14191 1432 aaPredicted RBP eCLIP25.29■■□□□ 1.641e-6■■■■□ 24.5
RANBP1-211ENST00000448394 TIAL1Q01085 375 aaKnown RBP eCLIP14.02□□□□□ -0.171e-6■■■■□ 24.3
RANBP1-211ENST00000448394 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.2□□□□□ -0.462e-8■■■■□ 24.3
RANBP1-211ENST00000448394 EIF3GO75821 320 aaKnown RBP eCLIP10.48□□□□□ -0.739e-8■■■■□ 23.7
RANBP1-211ENST00000448394 CDC40O60508 579 aaKnown RBP eCLIP13.29□□□□□ -0.282e-6■■■■□ 23.1
RANBP1-211ENST00000448394 NCBP2P52298 156 aaKnown RBP eCLIP13.42□□□□□ -0.262e-6■■■■□ 22.6
RANBP1-211ENST00000448394 TAF15Q92804 592 aaKnown RBP eCLIP11.69□□□□□ -0.542e-7■■■■□ 21.3
RANBP1-211ENST00000448394 NONOQ15233 471 aaKnown RBP eCLIP16.5■□□□□ 0.235e-12■■■■□ 21.2
RANBP1-211ENST00000448394 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.16■■□□□ 1.31e-10■■■■□ 20.5
RANBP1-211ENST00000448394 SF3A3Q12874 501 aaKnown RBP eCLIP13.15□□□□□ -0.32e-14■■■■□ 20.5
RANBP1-211ENST00000448394 AQRO60306 1485 aaKnown RBP eCLIP25.14■■□□□ 1.615e-9■■■■□ 20.2
RANBP1-211ENST00000448394 LSM11P83369 360 aaKnown RBP eCLIP12.74□□□□□ -0.378e-7■■■■□ 20
RANBP1-211ENST00000448394 SAFB2Q14151 953 aaKnown RBP eCLIP20.77■□□□□ 0.926e-9■■■■□ 19.7
RANBP1-211ENST00000448394 DDX42Q86XP3 938 aaKnown RBP eCLIP15.27■□□□□ 0.046e-7■■■□□ 19.2
RANBP1-211ENST00000448394 EFTUD2Q15029 972 aaKnown RBP eCLIP13.97□□□□□ -0.178e-11■■■□□ 19.2
RANBP1-211ENST00000448394 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.85□□□□□ -0.033e-6■■■□□ 18.8
RANBP1-211ENST00000448394 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.23■■□□□ 1.154e-10■■■□□ 18.8
RANBP1-211ENST00000448394 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.32□□□□□ -0.443e-7■■■□□ 18.1
RANBP1-211ENST00000448394 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.73■□□□□ 0.115e-8■■■□□ 17.3
RANBP1-211ENST00000448394 ZC3H11AO75152 810 aaKnown RBP eCLIP15.9■□□□□ 0.141e-6■■■□□ 17.1
RANBP1-211ENST00000448394 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.21■□□□□ 0.353e-7■■■□□ 16.5
RANBP1-211ENST00000448394 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.31■□□□□ 0.24e-10■■■□□ 16.2
RANBP1-211ENST00000448394 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.9□□□□□ -0.181e-7■■■□□ 14.9
RANBP1-211ENST00000448394 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.98■■□□□ 1.113e-9■■■□□ 14.7
RANBP1-211ENST00000448394 RBM22Q9NW64 420 aaKnown RBP eCLIP14.64□□□□□ -0.073e-9■■□□□ 14.4
RANBP1-211ENST00000448394 KHSRPQ92945 711 aaKnown RBP eCLIP15.43■□□□□ 0.064e-8■■□□□ 14.2
RANBP1-211ENST00000448394 HNRNPMP52272 730 aaKnown RBP eCLIP22.6■■□□□ 1.213e-7■■□□□ 13.8
RANBP1-211ENST00000448394 DDX6P26196 483 aaKnown RBP eCLIP15.38■□□□□ 0.059e-7■■□□□ 13.4
RANBP1-211ENST00000448394 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.54■□□□□ 0.42e-14■■□□□ 12.7
RANBP1-211ENST00000448394 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.3□□□□□ -0.282e-14■■□□□ 12.5
RANBP1-211ENST00000448394 AGGF1Q8N302 714 aaeCLIP14.19□□□□□ -0.142e-8■■□□□ 12.2
RANBP1-211ENST00000448394 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.99□□□□□ -0.012e-6■■□□□ 12.1
RANBP1-211ENST00000448394 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.43■■□□□ 1.023e-6■■□□□ 12
RANBP1-211ENST00000448394 TROVE2P10155 538 aaKnown RBP eCLIP13.24□□□□□ -0.292e-6■■□□□ 12
RANBP1-211ENST00000448394 LARP4Q71RC2 724 aaKnown RBP eCLIP13.36□□□□□ -0.277e-11■■□□□ 12
RANBP1-211ENST00000448394 SRSF7Q16629 238 aaKnown RBP eCLIP11.61□□□□□ -0.552e-6■■□□□ 11.9
RANBP1-211ENST00000448394 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.08■□□□□ 05e-17■■□□□ 11.8
RANBP1-211ENST00000448394 G3BP1Q13283 466 aaKnown RBP eCLIP17.97■□□□□ 0.478e-6■■□□□ 11.5
RANBP1-211ENST00000448394 CPSF6Q16630 551 aaKnown RBP eCLIP13.7□□□□□ -0.223e-7■□□□□ 11.2
RANBP1-211ENST00000448394 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.65□□□□□ -0.546e-9■□□□□ 11.2
RANBP1-211ENST00000448394 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.07■□□□□ 01e-6■□□□□ 11.1
RANBP1-211ENST00000448394 PUM1Q14671 1186 aaKnown RBP eCLIP14.6□□□□□ -0.072e-12■□□□□ 11
RANBP1-211ENST00000448394 NOLC1Q14978 699 aaKnown RBP eCLIP15.89■□□□□ 0.131e-8■□□□□ 11
RANBP1-211ENST00000448394 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.47■□□□□ 0.391e-6■□□□□ 10.8
RANBP1-211ENST00000448394 GPKOWQ92917 476 aaPredicted RBP eCLIP16.71■□□□□ 0.273e-6■□□□□ 10.8
RANBP1-211ENST00000448394 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.24■□□□□ 0.031e-6■□□□□ 10.7
RANBP1-211ENST00000448394 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.3■□□□□ 0.044e-7■□□□□ 10.5
RANBP1-211ENST00000448394 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.01□□□□□ -0.019e-7■□□□□ 9.7
RANBP1-211ENST00000448394 XRCC6P12956 609 aaKnown RBP eCLIP16.18■□□□□ 0.184e-17■□□□□ 9
RANBP1-211ENST00000448394 YBX3P16989 372 aaKnown RBP eCLIP18.62■□□□□ 0.573e-33■□□□□ 8.9
RANBP1-211ENST00000448394 RBM15Q96T37 977 aaKnown RBP eCLIP14.56□□□□□ -0.081e-7■□□□□ 8.3
RANBP1-211ENST00000448394 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.19□□□□□ -0.142e-17■□□□□ 8.1
RANBP1-211ENST00000448394 HNRNPUQ00839 825 aaKnown RBP eCLIP18.6■□□□□ 0.578e-8■□□□□ 8.1
Retrieved 85 of 85 RNA–protein pairs in 18.9 ms