RNA–Protein interactions for RNA: ENST00000448287.5

AGPAT3-208, Transcript of 1-acylglycerol-3-phosphate O-acyltransferase 3, humanhuman

TSL 3

Gene AGPAT3, Length 454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGPAT3-208ENST00000448287 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.17□□□□□ -0.31e-6■■■■■ 183
AGPAT3-208ENST00000448287 SF3B1O75533 1304 aaKnown RBP eCLIP12.98□□□□□ -0.332e-6■■■■■ 136.3
AGPAT3-208ENST00000448287 QKIQ96PU8 341 aaKnown RBP eCLIP12.62□□□□□ -0.397e-26■■■■■ 100.3
AGPAT3-208ENST00000448287 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.76□□□□□ -0.535e-6■■■■■ 75.3
AGPAT3-208ENST00000448287 PCBP2Q15366 365 aaKnown RBP eCLIP11.97□□□□□ -0.492e-6■■■■■ 69
AGPAT3-208ENST00000448287 HNRNPMP52272 730 aaKnown RBP eCLIP18.25■□□□□ 0.517e-7■■■■■ 63.9
AGPAT3-208ENST00000448287 DKC1O60832 514 aaKnown RBP eCLIP13.71□□□□□ -0.211e-6■■■■■ 53
AGPAT3-208ENST00000448287 WRNQ14191 1432 aaPredicted RBP eCLIP20.49■□□□□ 0.879e-6■■■■■ 50.1
AGPAT3-208ENST00000448287 GTF2F1P35269 517 aaKnown RBP eCLIP12.75□□□□□ -0.372e-12■■■■■ 48.9
AGPAT3-208ENST00000448287 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.62□□□□□ -0.393e-10■■■■■ 48.1
AGPAT3-208ENST00000448287 AGGF1Q8N302 714 aaeCLIP12.37□□□□□ -0.433e-7■■■■■ 44.8
AGPAT3-208ENST00000448287 EIF4G2P78344 907 aaKnown RBP eCLIP17.32■□□□□ 0.363e-7■■■■■ 42.7
AGPAT3-208ENST00000448287 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.34□□□□□ -0.437e-8■■■■■ 40.9
AGPAT3-208ENST00000448287 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.88□□□□□ -0.351e-11■■■■■ 39.7
AGPAT3-208ENST00000448287 AQRO60306 1485 aaKnown RBP eCLIP19.73■□□□□ 0.751e-9■■■■■ 37.7
AGPAT3-208ENST00000448287 TARDBPQ13148 414 aaKnown RBP eCLIP11.41□□□□□ -0.584e-7■■■■■ 37.4
AGPAT3-208ENST00000448287 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.85□□□□□ -0.352e-6■■■■■ 37
AGPAT3-208ENST00000448287 AATFQ9NY61 560 aaKnown RBP eCLIP14.59□□□□□ -0.073e-6■■■■■ 36.6
AGPAT3-208ENST00000448287 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.85□□□□□ -0.194e-6■■■■■ 35.1
AGPAT3-208ENST00000448287 SF3B4Q15427 424 aaKnown RBP eCLIP10.92□□□□□ -0.667e-7■■■■■ 32.6
AGPAT3-208ENST00000448287 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.76□□□□□ -0.374e-8■■■■■ 32.3
AGPAT3-208ENST00000448287 ZRANB2O95218 330 aaKnown RBP eCLIP12.81□□□□□ -0.369e-6■■■■■ 31.5
AGPAT3-208ENST00000448287 UPF1Q92900 1129 aaKnown RBP eCLIP15.16■□□□□ 0.024e-7■■■■■ 29.6
AGPAT3-208ENST00000448287 RBFOX2O43251 390 aaKnown RBP eCLIP9.99□□□□□ -0.812e-8■■■■■ 28.7
AGPAT3-208ENST00000448287 EFTUD2Q15029 972 aaKnown RBP eCLIP12.3□□□□□ -0.442e-8■■■■□ 26
AGPAT3-208ENST00000448287 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.4□□□□□ -0.265e-6■■■■□ 25.6
AGPAT3-208ENST00000448287 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.43□□□□□ -0.14e-6■■■■□ 25.5
AGPAT3-208ENST00000448287 HNRNPKP61978 463 aaKnown RBP eCLIP11.89□□□□□ -0.513e-7■■■■□ 24.7
AGPAT3-208ENST00000448287 SRSF7Q16629 238 aaKnown RBP eCLIP10.28□□□□□ -0.762e-7■■■■□ 24.5
AGPAT3-208ENST00000448287 PTBP1P26599 531 aaKnown RBP eCLIP10.51□□□□□ -0.734e-6■■■■□ 24.3
AGPAT3-208ENST00000448287 AARSP49588 968 aaKnown RBP eCLIP13.04□□□□□ -0.322e-7■■■■□ 23.2
AGPAT3-208ENST00000448287 ZC3H11AO75152 810 aaKnown RBP eCLIP13.25□□□□□ -0.295e-7■■■■□ 22.5
AGPAT3-208ENST00000448287 NIPBLQ6KC79 2804 aaeCLIP9.39□□□□□ -0.911e-5■■■■□ 22.3
AGPAT3-208ENST00000448287 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.32□□□□□ -0.121e-7■■■■□ 22.1
AGPAT3-208ENST00000448287 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.55■□□□□ 0.566e-7■■■■□ 21.3
AGPAT3-208ENST00000448287 FTOQ9C0B1 505 aaKnown RBP eCLIP13.99□□□□□ -0.173e-8■■■■□ 21.3
AGPAT3-208ENST00000448287 EWSR1Q01844 656 aaKnown RBP eCLIP9.79□□□□□ -0.841e-6■■■■□ 21.2
AGPAT3-208ENST00000448287 CSTF2P33240 577 aaKnown RBP eCLIP11.59□□□□□ -0.552e-6■■■■□ 20.9
AGPAT3-208ENST00000448287 U2AF2P26368 475 aaKnown RBP eCLIP14.1□□□□□ -0.158e-7■■■■□ 20.7
AGPAT3-208ENST00000448287 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.12□□□□□ -0.631e-6■■■■□ 20.5
AGPAT3-208ENST00000448287 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.45□□□□□ -0.424e-6■■■■□ 20.3
AGPAT3-208ENST00000448287 ILF3Q12906 894 aaKnown RBP eCLIP11.95□□□□□ -0.56e-11■■■■□ 19.7
AGPAT3-208ENST00000448287 HNRNPLP14866 589 aaKnown RBP eCLIP12.31□□□□□ -0.442e-7■■■■□ 19.6
AGPAT3-208ENST00000448287 METAP2P50579 478 aaKnown RBP eCLIP14.35□□□□□ -0.114e-6■■■■□ 19.3
AGPAT3-208ENST00000448287 DDX3XO00571 662 aaKnown RBP eCLIP13.08□□□□□ -0.322e-10■■■□□ 19.1
AGPAT3-208ENST00000448287 FUSP35637 526 aaKnown RBP eCLIP7.8□□□□□ -1.162e-7■■■□□ 18.9
AGPAT3-208ENST00000448287 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.73□□□□□ -0.371e-6■■■□□ 18.2
AGPAT3-208ENST00000448287 NONOQ15233 471 aaKnown RBP eCLIP14.01□□□□□ -0.172e-6■■■□□ 18.2
AGPAT3-208ENST00000448287 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.76□□□□□ -0.373e-6■■■□□ 17.2
AGPAT3-208ENST00000448287 FKBP4Q02790 459 aaKnown RBP eCLIP14.84□□□□□ -0.035e-6■■■□□ 17
AGPAT3-208ENST00000448287 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.01□□□□□ -0.651e-6■■■□□ 16.6
AGPAT3-208ENST00000448287 SFPQP23246 707 aaKnown RBP eCLIP13.35□□□□□ -0.272e-6■■■□□ 15.5
AGPAT3-208ENST00000448287 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.53■□□□□ 0.245e-6■■□□□ 14.5
AGPAT3-208ENST00000448287 PRPF4O43172 522 aaKnown RBP eCLIP12.21□□□□□ -0.451e-6■■□□□ 13.8
AGPAT3-208ENST00000448287 GRSF1Q12849 480 aaKnown RBP eCLIP12.3□□□□□ -0.441e-6■■□□□ 12.8
AGPAT3-208ENST00000448287 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.27□□□□□ -0.453e-6■■□□□ 12.8
AGPAT3-208ENST00000448287 RBM22Q9NW64 420 aaKnown RBP eCLIP12.51□□□□□ -0.412e-6■■□□□ 12.6
AGPAT3-208ENST00000448287 RBM5P52756 815 aaKnown RBP eCLIP14.52□□□□□ -0.094e-6■■□□□ 12.4
AGPAT3-208ENST00000448287 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.41■□□□□ 0.545e-6■■□□□ 12.3
AGPAT3-208ENST00000448287 SF3A3Q12874 501 aaKnown RBP eCLIP11.93□□□□□ -0.52e-8■■□□□ 11.8
AGPAT3-208ENST00000448287 HNRNPCP07910 306 aaKnown RBP eCLIP10.01□□□□□ -0.815e-6■□□□□ 10.4
AGPAT3-208ENST00000448287 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.94□□□□□ -0.346e-13■□□□□ 10.4
AGPAT3-208ENST00000448287 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.39□□□□□ -0.273e-6■□□□□ 10.3
AGPAT3-208ENST00000448287 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.5□□□□□ -0.571e-7■□□□□ 9.6
AGPAT3-208ENST00000448287 KHSRPQ92945 711 aaKnown RBP eCLIP12.83□□□□□ -0.364e-6■□□□□ 9.3
AGPAT3-208ENST00000448287 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.76□□□□□ -0.852e-7■□□□□ 8.6
AGPAT3-208ENST00000448287 NKRFO15226 690 aaKnown RBP eCLIP13.64□□□□□ -0.233e-7■□□□□ 8.2
Retrieved 67 of 67 RNA–protein pairs in 14.8 ms