RNA–Protein interactions for RNA: ENST00000447581.1

GJB1-204, Transcript of gap junction protein beta 1, humanhuman

TSL 5

Gene GJB1, Length 484 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GJB1-204ENST00000447581 NISCHQ9Y2I1 1504 aa21.33■■□□□ 1
GJB1-204ENST00000447581 ABCC9O60706 1549 aa19.59■□□□□ 0.73
GJB1-204ENST00000447581 CCDC180Q9P1Z9 1646 aa19.09■□□□□ 0.65
GJB1-204ENST00000447581 DNAJC5BQ9UF47 199 aa18.9■□□□□ 0.62
GJB1-204ENST00000447581 RB1CC1Q8TDY2 1594 aa18.32■□□□□ 0.52
GJB1-204ENST00000447581 PABPN1Q86U42 306 aaKnown RBP eCLIP18.22■□□□□ 0.51
GJB1-204ENST00000447581 NACADO15069 1562 aa18.08■□□□□ 0.49
GJB1-204ENST00000447581 UNC13AQ9UPW8 1703 aa18.05■□□□□ 0.48
GJB1-204ENST00000447581 DCAF8L2P0C7V8 631 aa18.01■□□□□ 0.47
GJB1-204ENST00000447581 BICRAQ9NZM4 1560 aa17.95■□□□□ 0.46
GJB1-204ENST00000447581 ZCCHC6Q5VYS8 1495 aaKnown RBP17.75■□□□□ 0.43
GJB1-204ENST00000447581 MYO15BQ96JP2 1530 aa17.68■□□□□ 0.42
GJB1-204ENST00000447581 DCAF1Q9Y4B6 1507 aa17.67■□□□□ 0.42
GJB1-204ENST00000447581 CC2D2AQ9P2K1 1620 aa17.65■□□□□ 0.42
GJB1-204ENST00000447581 CECR2Q9BXF3 1484 aa17.63■□□□□ 0.41
GJB1-204ENST00000447581 SCRIBQ14160 1630 aa17.54■□□□□ 0.4
GJB1-204ENST00000447581 DNAJC5Q9H3Z4 198 aa17.52■□□□□ 0.4
GJB1-204ENST00000447581 EIF4G1Q04637 1599 aaKnown RBP17.49■□□□□ 0.39
GJB1-204ENST00000447581 SHROOM4Q9ULL8 1493 aa17.42■□□□□ 0.38
GJB1-204ENST00000447581 CUX2O14529 1486 aa16.94■□□□□ 0.3
GJB1-204ENST00000447581 ERCC6Q03468 1493 aa16.85■□□□□ 0.29
GJB1-204ENST00000447581 NESP48681 1621 aa16.75■□□□□ 0.27
GJB1-204ENST00000447581 NCAPD3P42695 1498 aa16.74■□□□□ 0.27
GJB1-204ENST00000447581 ATAD2BQ9ULI0 1458 aa16.67■□□□□ 0.26
GJB1-204ENST00000447581 SMARCA4P51532 1647 aa16.66■□□□□ 0.26
GJB1-204ENST00000447581 TRIM41Q8WV44 630 aa16.61■□□□□ 0.25
GJB1-204ENST00000447581 THOC2Q8NI27 1593 aaKnown RBP16.6■□□□□ 0.25
GJB1-204ENST00000447581 BAZ1AQ9NRL2 1556 aaPredicted RBP16.55■□□□□ 0.24
GJB1-204ENST00000447581 HMGXB3Q12766 1538 aa16.55■□□□□ 0.24
GJB1-204ENST00000447581 SMARCA2P51531 1590 aa16.53■□□□□ 0.24
GJB1-204ENST00000447581 MROH2BQ7Z745 1585 aa16.49■□□□□ 0.23
GJB1-204ENST00000447581 BAZ1BQ9UIG0 1483 aaKnown RBP16.48■□□□□ 0.23
GJB1-204ENST00000447581 KIF21AQ7Z4S6 1674 aa16.47■□□□□ 0.23
GJB1-204ENST00000447581 PEG3Q9GZU2 1588 aa16.4■□□□□ 0.22
GJB1-204ENST00000447581 LAMC3Q9Y6N6 1575 aa16.4■□□□□ 0.22
GJB1-204ENST00000447581 WIZO95785 1651 aa16.35■□□□□ 0.21
GJB1-204ENST00000447581 PDS5BQ9NTI5 1447 aa16.3■□□□□ 0.2
GJB1-204ENST00000447581 MRC2Q9UBG0 1479 aa16.23■□□□□ 0.19
GJB1-204ENST00000447581 WDR62O43379 1518 aa16.23■□□□□ 0.19
GJB1-204ENST00000447581 CADPSQ9ULU8 1353 aa16.22■□□□□ 0.19
GJB1-204ENST00000447581 RSF1Q96T23 1441 aaPredicted RBP16.19■□□□□ 0.18
GJB1-204ENST00000447581 OSCARQ8IYS5 282 aa16.12■□□□□ 0.17
GJB1-204ENST00000447581 TOP2AP11388 1531 aaKnown RBP16.1■□□□□ 0.17
GJB1-204ENST00000447581 CEP164Q9UPV0 1460 aa16.07■□□□□ 0.16
GJB1-204ENST00000447581 FANCD2Q9BXW9 1451 aa16.05■□□□□ 0.16
GJB1-204ENST00000447581 RIMBP3CA6NJZ7 1639 aa16.03■□□□□ 0.16
GJB1-204ENST00000447581 RIMBP3BA6NNM3 1639 aa16.03■□□□□ 0.16
GJB1-204ENST00000447581 RIMBP3Q9UFD9 1639 aa16.03■□□□□ 0.16
GJB1-204ENST00000447581 URB2Q14146 1524 aaKnown RBP16■□□□□ 0.15
GJB1-204ENST00000447581 CFTRP13569 1480 aa15.95■□□□□ 0.14
GJB1-204ENST00000447581 ARHGEF11O15085 1522 aa15.92■□□□□ 0.14
GJB1-204ENST00000447581 ZNF608Q9ULD9 1512 aaPredicted RBP15.91■□□□□ 0.14
GJB1-204ENST00000447581 PRDM2Q13029 1718 aa15.91■□□□□ 0.14
GJB1-204ENST00000447581 SUPT5HO00267 1087 aaKnown RBP15.89■□□□□ 0.13
GJB1-204ENST00000447581 CCDC88BA6NC98 1476 aa15.89■□□□□ 0.13
GJB1-204ENST00000447581 CYB5RLQ6IPT4 315 aa15.85■□□□□ 0.13
GJB1-204ENST00000447581 TRHP20396 242 aaPredicted RBP15.77■□□□□ 0.12
GJB1-204ENST00000447581 ARAP1Q96P48 1450 aa15.77■□□□□ 0.11
GJB1-204ENST00000447581 IFT140Q96RY7 1462 aa15.75■□□□□ 0.11
GJB1-204ENST00000447581 EIF4G3O43432 1585 aaKnown RBP15.73■□□□□ 0.11
GJB1-204ENST00000447581 CHD1O14646 1710 aa15.72■□□□□ 0.11
GJB1-204ENST00000447581 TOPBP1Q92547 1522 aa15.71■□□□□ 0.11
GJB1-204ENST00000447581 AQRO60306 1485 aaKnown RBP eCLIP15.69■□□□□ 0.1
GJB1-204ENST00000447581 DNMBPQ6XZF7 1577 aa15.64■□□□□ 0.09
GJB1-204ENST00000447581 TARBP1Q13395 1621 aaKnown RBP15.63■□□□□ 0.09
GJB1-204ENST00000447581 FBLN2P98095 1184 aa15.62■□□□□ 0.09
GJB1-204ENST00000447581 AEBP2Q6ZN18 517 aaPredicted RBP15.57■□□□□ 0.08
GJB1-204ENST00000447581 ABCC8Q09428 1581 aa15.54■□□□□ 0.08
GJB1-204ENST00000447581 RAD54L2Q9Y4B4 1467 aa15.54■□□□□ 0.08
GJB1-204ENST00000447581 POLA1P09884 1462 aaPredicted RBP15.53■□□□□ 0.08
GJB1-204ENST00000447581 TDRD9Q8NDG6 1382 aaKnown RBP15.51■□□□□ 0.07
GJB1-204ENST00000447581 CLASP1Q7Z460 1538 aa15.51■□□□□ 0.07
GJB1-204ENST00000447581 CUX1P39880 1505 aa15.48■□□□□ 0.07
GJB1-204ENST00000447581 SNAPC4Q5SXM2 1469 aa15.47■□□□□ 0.07
GJB1-204ENST00000447581 FGD5Q6ZNL6 1462 aa15.47■□□□□ 0.07
GJB1-204ENST00000447581 SOGA1O94964 1423 aa15.43■□□□□ 0.06
GJB1-204ENST00000447581 CHMP7Q8WUX9 453 aaPredicted RBP15.38■□□□□ 0.05
GJB1-204ENST00000447581 WDR97A6NE52 1622 aa15.38■□□□□ 0.05
GJB1-204ENST00000447581 SYNJ1O43426 1573 aa15.37■□□□□ 0.05
GJB1-204ENST00000447581 GAPVD1Q14C86 1478 aa15.36■□□□□ 0.05
GJB1-204ENST00000447581 ERCC6L2Q5T890 1561 aa15.35■□□□□ 0.05
GJB1-204ENST00000447581 BIVM-ERCC5R4GMW8 1640 aa15.35■□□□□ 0.05
GJB1-204ENST00000447581 PBRM1Q86U86 1689 aa15.35■□□□□ 0.05
GJB1-204ENST00000447581 WRNQ14191 1432 aaPredicted RBP eCLIP15.33■□□□□ 0.04
GJB1-204ENST00000447581 MAGI1Q96QZ7 1491 aaPredicted RBP15.33■□□□□ 0.04
GJB1-204ENST00000447581 TOP2BQ02880 1626 aa15.32■□□□□ 0.04
GJB1-204ENST00000447581 SYNJ2O15056 1496 aa15.32■□□□□ 0.04
GJB1-204ENST00000447581 GRIN2BQ13224 1484 aa15.31■□□□□ 0.04
GJB1-204ENST00000447581 ABCA5Q8WWZ7 1642 aa15.27■□□□□ 0.03
GJB1-204ENST00000447581 ABCA10Q8WWZ4 1543 aa15.24■□□□□ 0.03
GJB1-204ENST00000447581 KIF13AQ9H1H9 1805 aa15.2■□□□□ 0.02
GJB1-204ENST00000447581 ADAMTS12P58397 1594 aa15.17■□□□□ 0.02
GJB1-204ENST00000447581 CEP170Q5SW79 1584 aa15.17■□□□□ 0.02
GJB1-204ENST00000447581 GRIN2AQ12879 1464 aa15.14■□□□□ 0.01
GJB1-204ENST00000447581 NUP160Q12769 1436 aa15.11■□□□□ 0.01
GJB1-204ENST00000447581 SHROOM2Q13796 1616 aa15.1■□□□□ 0.01
GJB1-204ENST00000447581 KDM4FA0A1W2PPD8 638 aa15.09■□□□□ 0.01
GJB1-204ENST00000447581 ILDR1Q86SU0 546 aaPredicted RBP15.07■□□□□ 0
GJB1-204ENST00000447581 ERICH3Q5RHP9 1530 aa15.06■□□□□ 0
GJB1-204ENST00000447581 FHAD1B1AJZ9 1412 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 230.4 ms