RNA–Protein interactions for RNA: ENST00000446643.2

WDR43-205, Transcript of WD repeat domain 43, humanhuman

TSL 4

Gene WDR43, Length 579 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WDR43-205ENST00000446643 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.3□□□□□ -1.41e-8■■■■■ 105.1
WDR43-205ENST00000446643 QKIQ96PU8 341 aaKnown RBP eCLIP6.58□□□□□ -1.368e-26■■■■■ 94.3
WDR43-205ENST00000446643 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.57□□□□□ -1.22e-7■■■■■ 37.5
WDR43-205ENST00000446643 PRPF4O43172 522 aaKnown RBP eCLIP6.96□□□□□ -1.31e-7■■■■■ 35.2
WDR43-205ENST00000446643 GTF2F1P35269 517 aaKnown RBP eCLIP9.53□□□□□ -0.881e-8■■■■■ 34.7
WDR43-205ENST00000446643 PCBP2Q15366 365 aaKnown RBP eCLIP7.44□□□□□ -1.228e-7■■■■■ 33.3
WDR43-205ENST00000446643 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.92□□□□□ -0.982e-17■■■■■ 32.8
WDR43-205ENST00000446643 RBFOX2O43251 390 aaKnown RBP eCLIP4.69□□□□□ -1.669e-10■■■■■ 31.5
WDR43-205ENST00000446643 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.67□□□□□ -1.028e-7■■■■■ 27.9
WDR43-205ENST00000446643 TRA2AQ13595 282 aaKnown RBP eCLIP7.75□□□□□ -1.179e-15■■■■□ 22.5
WDR43-205ENST00000446643 EFTUD2Q15029 972 aaKnown RBP eCLIP6.57□□□□□ -1.365e-7■■■■□ 20.5
WDR43-205ENST00000446643 KHSRPQ92945 711 aaKnown RBP eCLIP10.27□□□□□ -0.779e-6■■■□□ 18.5
WDR43-205ENST00000446643 AATFQ9NY61 560 aaKnown RBP eCLIP9.38□□□□□ -0.913e-6■■■□□ 18.2
WDR43-205ENST00000446643 ZNF622Q969S3 477 aaKnown RBP eCLIP11.07□□□□□ -0.647e-8■■■□□ 18
WDR43-205ENST00000446643 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.35□□□□□ -1.233e-9■■■□□ 17.6
WDR43-205ENST00000446643 U2AF2P26368 475 aaKnown RBP eCLIP8.56□□□□□ -1.045e-13■■■□□ 17.3
WDR43-205ENST00000446643 GPKOWQ92917 476 aaPredicted RBP eCLIP8.95□□□□□ -0.983e-6■■■□□ 17.3
WDR43-205ENST00000446643 PTBP1P26599 531 aaKnown RBP eCLIP5.02□□□□□ -1.619e-8■■■□□ 16.7
WDR43-205ENST00000446643 AQRO60306 1485 aaKnown RBP eCLIP15.75■□□□□ 0.117e-8■■■□□ 16.2
WDR43-205ENST00000446643 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.98□□□□□ -0.814e-9■■■□□ 16.1
WDR43-205ENST00000446643 SMNDC1O75940 238 aaKnown RBP eCLIP6.88□□□□□ -1.313e-6■■■□□ 15.3
WDR43-205ENST00000446643 SF3B4Q15427 424 aaKnown RBP eCLIP6.95□□□□□ -1.32e-7■■□□□ 14.3
WDR43-205ENST00000446643 U2AF1Q01081 240 aaKnown RBP eCLIP10.17□□□□□ -0.781e-6■■□□□ 14.1
WDR43-205ENST00000446643 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.27□□□□□ -0.776e-7■■□□□ 13.8
WDR43-205ENST00000446643 RBM15Q96T37 977 aaKnown RBP eCLIP7.7□□□□□ -1.183e-10■■□□□ 13.5
WDR43-205ENST00000446643 DDX6P26196 483 aaKnown RBP eCLIP8.28□□□□□ -1.083e-7■■□□□ 13.5
WDR43-205ENST00000446643 SRSF1Q07955 248 aaKnown RBP eCLIP9.1□□□□□ -0.953e-17■■□□□ 13
WDR43-205ENST00000446643 SRSF7Q16629 238 aaKnown RBP eCLIP5.94□□□□□ -1.468e-7■■□□□ 12.9
WDR43-205ENST00000446643 FXR2P51116 673 aaKnown RBP eCLIP10.18□□□□□ -0.783e-11■■□□□ 12.7
WDR43-205ENST00000446643 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.71□□□□□ -0.371e-6■■□□□ 12.3
WDR43-205ENST00000446643 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.94□□□□□ -0.661e-7■■□□□ 11.7
WDR43-205ENST00000446643 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.92□□□□□ -1.462e-6■■□□□ 11.5
WDR43-205ENST00000446643 HNRNPCP07910 306 aaKnown RBP eCLIP4.73□□□□□ -1.652e-6■■□□□ 11.4
WDR43-205ENST00000446643 SF3A3Q12874 501 aaKnown RBP eCLIP5.13□□□□□ -1.594e-7■□□□□ 11.1
WDR43-205ENST00000446643 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.91□□□□□ -1.149e-8■□□□□ 10.2
WDR43-205ENST00000446643 SRSF9Q13242 221 aaKnown RBP eCLIP4.69□□□□□ -1.666e-8■□□□□ 9
WDR43-205ENST00000446643 TROVE2P10155 538 aaKnown RBP eCLIP5.56□□□□□ -1.521e-9■□□□□ 8.9
Retrieved 37 of 37 RNA–protein pairs in 9.5 ms