RNA–Protein interactions for RNA: ENST00000446547.5

RAB5A-205, Transcript of RAB5A, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5A, Length 1,358 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5A-205ENST00000446547 AEBP2Q6ZN18 517 aaPredicted RBP24.33■■□□□ 1.49
RAB5A-205ENST00000446547 CHIC1Q5VXU3 224 aa22.88■■□□□ 1.25
RAB5A-205ENST00000446547 SENP3Q9H4L4 574 aaPredicted RBP20.8■□□□□ 0.92
RAB5A-205ENST00000446547 PHF23Q9BUL5 403 aaPredicted RBP20.49■□□□□ 0.87
RAB5A-205ENST00000446547 FOXD1Q16676 465 aa19.42■□□□□ 0.7
RAB5A-205ENST00000446547 MSH5O43196 834 aa18.28■□□□□ 0.52
RAB5A-205ENST00000446547 POTEDQ86YR6 584 aa18.27■□□□□ 0.51
RAB5A-205ENST00000446547 PLPPR3Q6T4P5 718 aa18.15■□□□□ 0.5
RAB5A-205ENST00000446547 PIAS4Q8N2W9 510 aaPredicted RBP18.04■□□□□ 0.48
RAB5A-205ENST00000446547 PPP6R1Q9UPN7 881 aa17.95■□□□□ 0.46
RAB5A-205ENST00000446547 ADRA2BP18089 450 aa17.85■□□□□ 0.45
RAB5A-205ENST00000446547 MAPK8IP2Q13387 824 aaPredicted RBP16.47■□□□□ 0.23
RAB5A-205ENST00000446547 DMRT2Q9Y5R5 561 aa16.47■□□□□ 0.23
RAB5A-205ENST00000446547 SCAF1Q9H7N4 1312 aaKnown RBP16.36■□□□□ 0.21
RAB5A-205ENST00000446547 PPP4R3CPQ6ZMV5 832 aa15.86■□□□□ 0.13
RAB5A-205ENST00000446547 CACNB1Q02641 598 aaPredicted RBP15.79■□□□□ 0.12
RAB5A-205ENST00000446547 HOXD11P31277 338 aaPredicted RBP15.78■□□□□ 0.12
RAB5A-205ENST00000446547 DCAF8L1A6NGE4 600 aa15.69■□□□□ 0.1
RAB5A-205ENST00000446547 CNKSR2Q8WXI2 1034 aa15.64■□□□□ 0.09
RAB5A-205ENST00000446547 RNF39Q9H2S5 420 aa15.59■□□□□ 0.09
RAB5A-205ENST00000446547 RNF216Q9NWF9 866 aaPredicted RBP15.58■□□□□ 0.08
RAB5A-205ENST00000446547 DNAJC5BQ9UF47 199 aa15.36■□□□□ 0.05
RAB5A-205ENST00000446547 C1QBPQ07021 282 aaKnown RBP15.35■□□□□ 0.05
RAB5A-205ENST00000446547 NCBP3Q53F19 620 aaKnown RBP15.17■□□□□ 0.02
RAB5A-205ENST00000446547 NPM3O75607 178 aaKnown RBP14.96□□□□□ -0.02
RAB5A-205ENST00000446547 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.96□□□□□ -0.02
RAB5A-205ENST00000446547 U3KPZ7 1027 aaPredicted RBP14.65□□□□□ -0.06
RAB5A-205ENST00000446547 DSG3P32926 999 aa14.49□□□□□ -0.09
RAB5A-205ENST00000446547 SPINK5Q9NQ38 1064 aaPredicted RBP14.49□□□□□ -0.09
RAB5A-205ENST00000446547 CAPN15O75808 1086 aa14.45□□□□□ -0.1
RAB5A-205ENST00000446547 KCNA4P22459 653 aa14.42□□□□□ -0.1
RAB5A-205ENST00000446547 SLC4A2P04920 1241 aa14.37□□□□□ -0.11
RAB5A-205ENST00000446547 POTEHQ6S545 545 aa14.26□□□□□ -0.13
RAB5A-205ENST00000446547 APLP2Q06481 763 aa14.22□□□□□ -0.13
RAB5A-205ENST00000446547 ZNF219Q9P2Y4 722 aaPredicted RBP14.18□□□□□ -0.14
RAB5A-205ENST00000446547 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.15□□□□□ -0.14
RAB5A-205ENST00000446547 TRHP20396 242 aaPredicted RBP14.15□□□□□ -0.14
RAB5A-205ENST00000446547 HNRNPUL2Q1KMD3 747 aaKnown RBP14.15□□□□□ -0.14
RAB5A-205ENST00000446547 ABCB7O75027 752 aa14.08□□□□□ -0.16
RAB5A-205ENST00000446547 SAMD1Q6SPF0 538 aaPredicted RBP14.06□□□□□ -0.16
RAB5A-205ENST00000446547 MYCNP04198 464 aaPredicted RBP13.84□□□□□ -0.19
RAB5A-205ENST00000446547 RBM42Q9BTD8 480 aaKnown RBP13.83□□□□□ -0.19
RAB5A-205ENST00000446547 EHMT2Q96KQ7 1210 aa13.78□□□□□ -0.2
RAB5A-205ENST00000446547 POLA2Q14181 598 aa13.75□□□□□ -0.21
RAB5A-205ENST00000446547 CHRDL2Q6WN34 429 aa13.62□□□□□ -0.23
RAB5A-205ENST00000446547 FOXD4L1Q9NU39 408 aa13.56□□□□□ -0.24
RAB5A-205ENST00000446547 SLC4A1APQ9BWU0 796 aaKnown RBP13.55□□□□□ -0.24
RAB5A-205ENST00000446547 ATF5Q9Y2D1 282 aaPredicted RBP13.53□□□□□ -0.24
RAB5A-205ENST00000446547 AKT1S1Q96B36 256 aa13.47□□□□□ -0.25
RAB5A-205ENST00000446547 ZBTB12Q9Y330 459 aaPredicted RBP13.47□□□□□ -0.25
RAB5A-205ENST00000446547 CSRNP3Q8WYN3 585 aa13.33□□□□□ -0.27
RAB5A-205ENST00000446547 REM2Q8IYK8 340 aaPredicted RBP13.32□□□□□ -0.28
RAB5A-205ENST00000446547 OSCARQ8IYS5 282 aa13.31□□□□□ -0.28
RAB5A-205ENST00000446547 ZBTB22O15209 634 aa13.26□□□□□ -0.29
RAB5A-205ENST00000446547 PIP4P2Q8N4L2 257 aa13.24□□□□□ -0.29
RAB5A-205ENST00000446547 SP7Q8TDD2 431 aaPredicted RBP13.24□□□□□ -0.29
RAB5A-205ENST00000446547 ATXN8OSP0DMR3 200 aa13.21□□□□□ -0.29
RAB5A-205ENST00000446547 PITPNM1O00562 1244 aa13.17□□□□□ -0.3
RAB5A-205ENST00000446547 FXR2P51116 673 aaKnown RBP eCLIP13.15□□□□□ -0.3
RAB5A-205ENST00000446547 SPDYE2BA6NHP3 402 aa13.05□□□□□ -0.32
RAB5A-205ENST00000446547 SPDYE6P0CI01 402 aa13.05□□□□□ -0.32
RAB5A-205ENST00000446547 SPDYE2Q495Y8 402 aa13.05□□□□□ -0.32
RAB5A-205ENST00000446547 HAX1O00165 279 aa13.04□□□□□ -0.32
RAB5A-205ENST00000446547 FBLN2P98095 1184 aa13□□□□□ -0.33
RAB5A-205ENST00000446547 MKRN4PQ13434 485 aaPredicted RBP12.91□□□□□ -0.34
RAB5A-205ENST00000446547 EVX2Q03828 476 aa12.89□□□□□ -0.35
RAB5A-205ENST00000446547 SPDYE1Q8NFV5 336 aaPredicted RBP12.86□□□□□ -0.35
RAB5A-205ENST00000446547 SSUH2Q9Y2M2 353 aa12.85□□□□□ -0.35
RAB5A-205ENST00000446547 PRKAR2AP13861 404 aaKnown RBP12.81□□□□□ -0.36
RAB5A-205ENST00000446547 ZNF692Q9BU19 519 aaPredicted RBP12.81□□□□□ -0.36
RAB5A-205ENST00000446547 CLEC11AQ9Y240 323 aa12.8□□□□□ -0.36
RAB5A-205ENST00000446547 C19orf67A6NJJ6 358 aa12.73□□□□□ -0.37
RAB5A-205ENST00000446547 PABPN1Q86U42 306 aaKnown RBP eCLIP12.61□□□□□ -0.39
RAB5A-205ENST00000446547 GABBR2O75899 941 aa12.59□□□□□ -0.39
RAB5A-205ENST00000446547 CHADLQ6NUI6 762 aa12.59□□□□□ -0.39
RAB5A-205ENST00000446547 PRR29P0C7W0 189 aa12.58□□□□□ -0.4
RAB5A-205ENST00000446547 FARP1Q9Y4F1 1045 aaPredicted RBP12.43□□□□□ -0.42
RAB5A-205ENST00000446547 LHX8Q68G74 356 aa12.41□□□□□ -0.42
RAB5A-205ENST00000446547 CD44P16070 742 aaKnown RBP12.4□□□□□ -0.42
RAB5A-205ENST00000446547 CLCN6P51797 869 aa12.37□□□□□ -0.43
RAB5A-205ENST00000446547 POTEIP0CG38 1075 aa12.33□□□□□ -0.44
RAB5A-205ENST00000446547 CREBZFQ9NS37 354 aa12.24□□□□□ -0.45
RAB5A-205ENST00000446547 STAG3Q9UJ98 1225 aa12.24□□□□□ -0.45
RAB5A-205ENST00000446547 ZNF579Q8NAF0 562 aaKnown RBP12.23□□□□□ -0.45
RAB5A-205ENST00000446547 DCBLD2Q96PD2 775 aa12.17□□□□□ -0.46
RAB5A-205ENST00000446547 ZRANB1Q9UGI0 708 aa12.17□□□□□ -0.46
RAB5A-205ENST00000446547 SPDYE4A6NLX3 237 aa12.14□□□□□ -0.47
RAB5A-205ENST00000446547 GALR2O43603 387 aaPredicted RBP12.06□□□□□ -0.48
RAB5A-205ENST00000446547 FKBP8Q14318 412 aa12.04□□□□□ -0.48
RAB5A-205ENST00000446547 MNX1P50219 401 aaPredicted RBP12.03□□□□□ -0.48
RAB5A-205ENST00000446547 PAK3O75914 559 aaPredicted RBP12.01□□□□□ -0.49
RAB5A-205ENST00000446547 NPM1P06748 294 aaKnown RBP eCLIP11.99□□□□□ -0.49
RAB5A-205ENST00000446547 PHF12Q96QT6 1004 aa11.97□□□□□ -0.49
RAB5A-205ENST00000446547 OTUD5Q96G74 571 aa11.92□□□□□ -0.5
RAB5A-205ENST00000446547 POTEB2H3BUK9 544 aa11.92□□□□□ -0.5
RAB5A-205ENST00000446547 RTN4Q9NQC3 1192 aaKnown RBP11.9□□□□□ -0.5
RAB5A-205ENST00000446547 PROM2Q8N271 834 aa11.89□□□□□ -0.51
RAB5A-205ENST00000446547 PELP1Q8IZL8 1130 aaKnown RBP11.87□□□□□ -0.51
RAB5A-205ENST00000446547 ASTLQ6HA08 431 aaPredicted RBP11.84□□□□□ -0.51
RAB5A-205ENST00000446547 AMER1Q5JTC6 1135 aaPredicted RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms