RNA–Protein interactions for RNA: ENST00000445815.1

AFF3-213, Transcript of AF4/FMR2 family member 3, humanhuman

TSL 2

Gene AFF3, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-213ENST00000445815 NISCHQ9Y2I1 1504 aa40.58■■■■■ 4.09
AFF3-213ENST00000445815 ABCC9O60706 1549 aa36.49■■■■□ 3.43
AFF3-213ENST00000445815 CCDC180Q9P1Z9 1646 aa36.41■■■■□ 3.42
AFF3-213ENST00000445815 RB1CC1Q8TDY2 1594 aa34.72■■■■□ 3.15
AFF3-213ENST00000445815 NACADO15069 1562 aa34.5■■■■□ 3.11
AFF3-213ENST00000445815 DNAJC5BQ9UF47 199 aa34.45■■■■□ 3.11
AFF3-213ENST00000445815 DCAF8L2P0C7V8 631 aa34.24■■■■□ 3.07
AFF3-213ENST00000445815 MYO15BQ96JP2 1530 aa34.07■■■■□ 3.04
AFF3-213ENST00000445815 PABPN1Q86U42 306 aaKnown RBP eCLIP34■■■■□ 3.03
AFF3-213ENST00000445815 UNC13AQ9UPW8 1703 aa33.87■■■■□ 3.01
AFF3-213ENST00000445815 BICRAQ9NZM4 1560 aa33.74■■■□□ 2.99
AFF3-213ENST00000445815 ZCCHC6Q5VYS8 1495 aaKnown RBP33.58■■■□□ 2.97
AFF3-213ENST00000445815 DCAF1Q9Y4B6 1507 aa33.57■■■□□ 2.96
AFF3-213ENST00000445815 SHROOM4Q9ULL8 1493 aa33.32■■■□□ 2.92
AFF3-213ENST00000445815 SCRIBQ14160 1630 aa33.09■■■□□ 2.89
AFF3-213ENST00000445815 CC2D2AQ9P2K1 1620 aa32.98■■■□□ 2.87
AFF3-213ENST00000445815 CECR2Q9BXF3 1484 aa32.93■■■□□ 2.86
AFF3-213ENST00000445815 EIF4G1Q04637 1599 aaKnown RBP32.9■■■□□ 2.86
AFF3-213ENST00000445815 NCAPD3P42695 1498 aa31.91■■■□□ 2.7
AFF3-213ENST00000445815 DNAJC5Q9H3Z4 198 aa31.75■■■□□ 2.67
AFF3-213ENST00000445815 ATAD2BQ9ULI0 1458 aa31.75■■■□□ 2.67
AFF3-213ENST00000445815 SMARCA2P51531 1590 aa31.62■■■□□ 2.65
AFF3-213ENST00000445815 SMARCA4P51532 1647 aa31.62■■■□□ 2.65
AFF3-213ENST00000445815 HMGXB3Q12766 1538 aa31.59■■■□□ 2.65
AFF3-213ENST00000445815 CUX2O14529 1486 aa31.57■■■□□ 2.64
AFF3-213ENST00000445815 ERCC6Q03468 1493 aa31.5■■■□□ 2.63
AFF3-213ENST00000445815 BAZ1AQ9NRL2 1556 aaPredicted RBP31.48■■■□□ 2.63
AFF3-213ENST00000445815 PEG3Q9GZU2 1588 aa31.39■■■□□ 2.62
AFF3-213ENST00000445815 BAZ1BQ9UIG0 1483 aaKnown RBP31.38■■■□□ 2.61
AFF3-213ENST00000445815 NESP48681 1621 aa31.33■■■□□ 2.61
AFF3-213ENST00000445815 MROH2BQ7Z745 1585 aa31.24■■■□□ 2.59
AFF3-213ENST00000445815 LAMC3Q9Y6N6 1575 aa31.13■■■□□ 2.57
AFF3-213ENST00000445815 THOC2Q8NI27 1593 aaKnown RBP31.02■■■□□ 2.56
AFF3-213ENST00000445815 PDS5BQ9NTI5 1447 aa30.98■■■□□ 2.55
AFF3-213ENST00000445815 CADPSQ9ULU8 1353 aa30.92■■■□□ 2.54
AFF3-213ENST00000445815 KIF21AQ7Z4S6 1674 aa30.86■■■□□ 2.53
AFF3-213ENST00000445815 WIZO95785 1651 aa30.81■■■□□ 2.52
AFF3-213ENST00000445815 MRC2Q9UBG0 1479 aa30.68■■■□□ 2.5
AFF3-213ENST00000445815 WDR62O43379 1518 aa30.62■■■□□ 2.49
AFF3-213ENST00000445815 RSF1Q96T23 1441 aaPredicted RBP30.6■■■□□ 2.49
AFF3-213ENST00000445815 CFTRP13569 1480 aa30.54■■■□□ 2.48
AFF3-213ENST00000445815 CEP164Q9UPV0 1460 aa30.52■■■□□ 2.48
AFF3-213ENST00000445815 FANCD2Q9BXW9 1451 aa30.5■■■□□ 2.47
AFF3-213ENST00000445815 TOP2AP11388 1531 aaKnown RBP30.44■■■□□ 2.46
AFF3-213ENST00000445815 URB2Q14146 1524 aaKnown RBP30.25■■■□□ 2.43
AFF3-213ENST00000445815 OSCARQ8IYS5 282 aa30.16■■■□□ 2.42
AFF3-213ENST00000445815 TRIM41Q8WV44 630 aa30.16■■■□□ 2.42
AFF3-213ENST00000445815 CCDC88BA6NC98 1476 aa30.14■■■□□ 2.42
AFF3-213ENST00000445815 PRDM2Q13029 1718 aa30.07■■■□□ 2.4
AFF3-213ENST00000445815 IFT140Q96RY7 1462 aa29.96■■■□□ 2.39
AFF3-213ENST00000445815 TOPBP1Q92547 1522 aa29.91■■■□□ 2.38
AFF3-213ENST00000445815 ABCC8Q09428 1581 aa29.9■■■□□ 2.38
AFF3-213ENST00000445815 ZNF608Q9ULD9 1512 aaPredicted RBP29.89■■■□□ 2.38
AFF3-213ENST00000445815 DNMBPQ6XZF7 1577 aa29.77■■■□□ 2.36
AFF3-213ENST00000445815 EIF4G3O43432 1585 aaKnown RBP29.66■■■□□ 2.34
AFF3-213ENST00000445815 TARBP1Q13395 1621 aaKnown RBP29.66■■■□□ 2.34
AFF3-213ENST00000445815 RIMBP3CA6NJZ7 1639 aa29.65■■■□□ 2.34
AFF3-213ENST00000445815 RIMBP3BA6NNM3 1639 aa29.65■■■□□ 2.34
AFF3-213ENST00000445815 RIMBP3Q9UFD9 1639 aa29.65■■■□□ 2.34
AFF3-213ENST00000445815 AQRO60306 1485 aaKnown RBP eCLIP29.63■■■□□ 2.33
AFF3-213ENST00000445815 POLA1P09884 1462 aaPredicted RBP29.6■■■□□ 2.33
AFF3-213ENST00000445815 ARHGEF11O15085 1522 aa29.58■■■□□ 2.33
AFF3-213ENST00000445815 SOGA1O94964 1423 aa29.49■■■□□ 2.31
AFF3-213ENST00000445815 RAD54L2Q9Y4B4 1467 aa29.48■■■□□ 2.31
AFF3-213ENST00000445815 CHD1O14646 1710 aa29.43■■■□□ 2.3
AFF3-213ENST00000445815 TDRD9Q8NDG6 1382 aaKnown RBP29.43■■■□□ 2.3
AFF3-213ENST00000445815 FBLN2P98095 1184 aa29.42■■■□□ 2.3
AFF3-213ENST00000445815 CYB5RLQ6IPT4 315 aa29.41■■■□□ 2.3
AFF3-213ENST00000445815 FGD5Q6ZNL6 1462 aa29.38■■■□□ 2.29
AFF3-213ENST00000445815 WDR97A6NE52 1622 aa29.37■■■□□ 2.29
AFF3-213ENST00000445815 CUX1P39880 1505 aa29.35■■■□□ 2.29
AFF3-213ENST00000445815 ARAP1Q96P48 1450 aa29.29■■■□□ 2.28
AFF3-213ENST00000445815 SNAPC4Q5SXM2 1469 aa29.28■■■□□ 2.28
AFF3-213ENST00000445815 MAGI1Q96QZ7 1491 aaPredicted RBP29.25■■■□□ 2.27
AFF3-213ENST00000445815 CHMP7Q8WUX9 453 aaPredicted RBP29.24■■■□□ 2.27
AFF3-213ENST00000445815 GRIN2BQ13224 1484 aa29.23■■■□□ 2.27
AFF3-213ENST00000445815 CLASP1Q7Z460 1538 aa29.19■■■□□ 2.26
AFF3-213ENST00000445815 SYNJ2O15056 1496 aa29.16■■■□□ 2.26
AFF3-213ENST00000445815 SYNJ1O43426 1573 aa29.13■■■□□ 2.25
AFF3-213ENST00000445815 GAPVD1Q14C86 1478 aa29.11■■■□□ 2.25
AFF3-213ENST00000445815 ABCA10Q8WWZ4 1543 aa29.09■■■□□ 2.25
AFF3-213ENST00000445815 SUPT5HO00267 1087 aaKnown RBP29.08■■■□□ 2.25
AFF3-213ENST00000445815 TRHP20396 242 aaPredicted RBP29.06■■■□□ 2.24
AFF3-213ENST00000445815 ABCA5Q8WWZ7 1642 aa29■■■□□ 2.23
AFF3-213ENST00000445815 PBRM1Q86U86 1689 aa28.99■■■□□ 2.23
AFF3-213ENST00000445815 WRNQ14191 1432 aaPredicted RBP eCLIP28.94■■■□□ 2.22
AFF3-213ENST00000445815 TOP2BQ02880 1626 aa28.85■■■□□ 2.21
AFF3-213ENST00000445815 GRIN2AQ12879 1464 aa28.85■■■□□ 2.21
AFF3-213ENST00000445815 BIVM-ERCC5R4GMW8 1640 aa28.83■■■□□ 2.21
AFF3-213ENST00000445815 NUP160Q12769 1436 aa28.79■■■□□ 2.2
AFF3-213ENST00000445815 ADAMTS12P58397 1594 aa28.76■■■□□ 2.19
AFF3-213ENST00000445815 FHAD1B1AJZ9 1412 aa28.76■■■□□ 2.19
AFF3-213ENST00000445815 CEP170Q5SW79 1584 aa28.71■■■□□ 2.19
AFF3-213ENST00000445815 ERICH3Q5RHP9 1530 aa28.71■■■□□ 2.19
AFF3-213ENST00000445815 ERCC6L2Q5T890 1561 aa28.69■■■□□ 2.18
AFF3-213ENST00000445815 SHROOM2Q13796 1616 aa28.64■■■□□ 2.18
AFF3-213ENST00000445815 JPH4Q96JJ6 628 aa28.53■■■□□ 2.16
AFF3-213ENST00000445815 PRG4Q92954 1404 aaPredicted RBP28.49■■■□□ 2.15
AFF3-213ENST00000445815 IGF1RP08069 1367 aa28.38■■■□□ 2.13
AFF3-213ENST00000445815 RUSC2Q8N2Y8 1516 aa28.36■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms