RNA–Protein interactions for RNA: ENST00000445566.1

EFHD2-202, Transcript of EF-hand domain family member D2, humanhuman

TSL 5

Gene EFHD2, Length 899 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFHD2-202ENST00000445566 AKAP1Q92667 903 aaKnown RBP eCLIP16.69■□□□□ 0.263e-26■■■■■ 60.8
EFHD2-202ENST00000445566 UPF1Q92900 1129 aaKnown RBP eCLIP25.03■■□□□ 1.61e-14■■■■■ 56.3
EFHD2-202ENST00000445566 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.74■□□□□ 0.916e-14■■■■■ 335.4
EFHD2-202ENST00000445566 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.28■□□□□ 0.842e-12■□□□□ 10.2
EFHD2-202ENST00000445566 PABPC4Q13310 644 aaKnown RBP eCLIP22.62■■□□□ 1.212e-8■■■■□ 19.9
EFHD2-202ENST00000445566 HNRNPKP61978 463 aaKnown RBP eCLIP19.1■□□□□ 0.656e-8■■■■□ 26.6
EFHD2-202ENST00000445566 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.07■□□□□ 0.963e-7■■■□□ 17.7
EFHD2-202ENST00000445566 WRNQ14191 1432 aaPredicted RBP eCLIP33.08■■■□□ 2.891e-6■■■■■ 58.5
EFHD2-202ENST00000445566 PCBP1Q15365 356 aaKnown RBP eCLIP21.37■■□□□ 1.012e-6■■□□□ 12.8
EFHD2-202ENST00000445566 PCBP2Q15366 365 aaKnown RBP eCLIP18.72■□□□□ 0.599e-6■□□□□ 8.7
Retrieved 10 of 10 RNA–protein pairs in 3.7 ms