RNA–Protein interactions for RNA: ENST00000445273.6

HSPH1-204, Transcript of heat shock protein family H (Hsp110) member 1, humanhuman

TSL 2 BASIC

Gene HSPH1, Length 4,987 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPH1-204ENST00000445273 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.14□□□□□ -0.478e-31■■■□□ 19.1
HSPH1-204ENST00000445273 U2AF1Q01081 240 aaKnown RBP eCLIP15.37■□□□□ 0.056e-16■■■■■ 58.8
HSPH1-204ENST00000445273 KHSRPQ92945 711 aaKnown RBP eCLIP11.72□□□□□ -0.531e-12■■■■■ 29
HSPH1-204ENST00000445273 PTBP1P26599 531 aaKnown RBP eCLIP11.92□□□□□ -0.54e-12■■■■■ 26.8
HSPH1-204ENST00000445273 DDX3XO00571 662 aaKnown RBP eCLIP13.12□□□□□ -0.316e-12■■■■□ 25
HSPH1-204ENST00000445273 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.03□□□□□ -0.645e-10■■■■■ 32.3
HSPH1-204ENST00000445273 U2AF2P26368 475 aaKnown RBP eCLIP14.88□□□□□ -0.032e-9■■■■■ 38.7
HSPH1-204ENST00000445273 PABPC4Q13310 644 aaKnown RBP eCLIP13.34□□□□□ -0.274e-9■□□□□ 11.2
HSPH1-204ENST00000445273 SUB1P53999 127 aaKnown RBP eCLIP11.03□□□□□ -0.643e-8■■■■■ 52.9
HSPH1-204ENST00000445273 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.51□□□□□ -0.893e-8■■■■■ 32.2
HSPH1-204ENST00000445273 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.54□□□□□ -0.244e-8■■□□□ 12.6
HSPH1-204ENST00000445273 NCBP2P52298 156 aaKnown RBP eCLIP11.99□□□□□ -0.494e-8■□□□□ 8.9
HSPH1-204ENST00000445273 SF3B1O75533 1304 aaKnown RBP eCLIP12.65□□□□□ -0.382e-7■■■■■ 49
HSPH1-204ENST00000445273 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.45□□□□□ -0.13e-7■■□□□ 13.1
HSPH1-204ENST00000445273 FMR1Q06787 632 aaKnown RBP eCLIP13.54□□□□□ -0.243e-7■■■□□ 15.5
HSPH1-204ENST00000445273 DDX6P26196 483 aaKnown RBP eCLIP12.12□□□□□ -0.475e-7■■■■■ 30
HSPH1-204ENST00000445273 FKBP4Q02790 459 aaKnown RBP eCLIP14.26□□□□□ -0.136e-7■■□□□ 12.4
HSPH1-204ENST00000445273 TARDBPQ13148 414 aaKnown RBP eCLIP12.27□□□□□ -0.457e-7■■■■□ 25.5
HSPH1-204ENST00000445273 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.89□□□□□ -0.358e-7■■■□□ 16.5
HSPH1-204ENST00000445273 YBX3P16989 372 aaKnown RBP eCLIP12.47□□□□□ -0.419e-7■□□□□ 9
HSPH1-204ENST00000445273 RBM22Q9NW64 420 aaKnown RBP eCLIP12.55□□□□□ -0.42e-6■■■■□ 25.8
HSPH1-204ENST00000445273 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.75■□□□□ 0.112e-6■■■□□ 17.2
HSPH1-204ENST00000445273 SND1Q7KZF4 910 aaKnown RBP eCLIP14.26□□□□□ -0.132e-6■■□□□ 13.3
HSPH1-204ENST00000445273 EFTUD2Q15029 972 aaKnown RBP eCLIP13.28□□□□□ -0.283e-6■■■■□ 23.5
HSPH1-204ENST00000445273 RPS3P23396 243 aaKnown RBP eCLIP12.56□□□□□ -0.43e-6■■■■■ 36
HSPH1-204ENST00000445273 NIPBLQ6KC79 2804 aaeCLIP7.16□□□□□ -1.265e-6■□□□□ 8.1
Retrieved 26 of 26 RNA–protein pairs in 5.8 ms