RNA–Protein interactions for RNA: ENST00000444411.5

MMS19-212, Transcript of MMS19 homolog, cytosolic iron-sulfur assembly component, humanhuman

TSL 2

Gene MMS19, Length 640 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMS19-212ENST00000444411 NISCHQ9Y2I1 1504 aa37.2■■■■□ 3.55
MMS19-212ENST00000444411 CCDC180Q9P1Z9 1646 aa33.32■■■□□ 2.92
MMS19-212ENST00000444411 ABCC9O60706 1549 aa33.3■■■□□ 2.92
MMS19-212ENST00000444411 RB1CC1Q8TDY2 1594 aa31.75■■■□□ 2.67
MMS19-212ENST00000444411 DCAF8L2P0C7V8 631 aa31.68■■■□□ 2.66
MMS19-212ENST00000444411 NACADO15069 1562 aa31.52■■■□□ 2.64
MMS19-212ENST00000444411 PABPN1Q86U42 306 aaKnown RBP eCLIP31.07■■■□□ 2.565e-8■■■■■ 27.1
MMS19-212ENST00000444411 MYO15BQ96JP2 1530 aa31.05■■■□□ 2.56
MMS19-212ENST00000444411 DNAJC5BQ9UF47 199 aa31.05■■■□□ 2.56
MMS19-212ENST00000444411 UNC13AQ9UPW8 1703 aa30.91■■■□□ 2.54
MMS19-212ENST00000444411 ZCCHC6Q5VYS8 1495 aaKnown RBP30.82■■■□□ 2.52
MMS19-212ENST00000444411 DCAF1Q9Y4B6 1507 aa30.7■■■□□ 2.51
MMS19-212ENST00000444411 BICRAQ9NZM4 1560 aa30.66■■■□□ 2.5
MMS19-212ENST00000444411 SCRIBQ14160 1630 aa30.43■■■□□ 2.46
MMS19-212ENST00000444411 SHROOM4Q9ULL8 1493 aa30.34■■■□□ 2.45
MMS19-212ENST00000444411 CC2D2AQ9P2K1 1620 aa30.04■■■□□ 2.4
MMS19-212ENST00000444411 CECR2Q9BXF3 1484 aa29.99■■■□□ 2.39
MMS19-212ENST00000444411 EIF4G1Q04637 1599 aaKnown RBP29.98■■■□□ 2.39
MMS19-212ENST00000444411 NCAPD3P42695 1498 aa29.08■■■□□ 2.25
MMS19-212ENST00000444411 ATAD2BQ9ULI0 1458 aa29■■■□□ 2.23
MMS19-212ENST00000444411 SMARCA4P51532 1647 aa29■■■□□ 2.23
MMS19-212ENST00000444411 SMARCA2P51531 1590 aa28.98■■■□□ 2.23
MMS19-212ENST00000444411 BAZ1AQ9NRL2 1556 aaPredicted RBP28.92■■■□□ 2.22
MMS19-212ENST00000444411 HMGXB3Q12766 1538 aa28.85■■■□□ 2.21
MMS19-212ENST00000444411 ERCC6Q03468 1493 aa28.84■■■□□ 2.21
MMS19-212ENST00000444411 BAZ1BQ9UIG0 1483 aaKnown RBP28.8■■■□□ 2.2
MMS19-212ENST00000444411 MROH2BQ7Z745 1585 aa28.65■■■□□ 2.18
MMS19-212ENST00000444411 PEG3Q9GZU2 1588 aa28.65■■■□□ 2.18
MMS19-212ENST00000444411 CUX2O14529 1486 aa28.64■■■□□ 2.17
MMS19-212ENST00000444411 NESP48681 1621 aa28.58■■■□□ 2.17
MMS19-212ENST00000444411 DNAJC5Q9H3Z4 198 aa28.53■■■□□ 2.16
MMS19-212ENST00000444411 LAMC3Q9Y6N6 1575 aa28.44■■■□□ 2.14
MMS19-212ENST00000444411 PDS5BQ9NTI5 1447 aa28.35■■■□□ 2.13
MMS19-212ENST00000444411 WIZO95785 1651 aa28.34■■■□□ 2.13
MMS19-212ENST00000444411 CADPSQ9ULU8 1353 aa28.26■■■□□ 2.12
MMS19-212ENST00000444411 KIF21AQ7Z4S6 1674 aa28.22■■■□□ 2.11
MMS19-212ENST00000444411 THOC2Q8NI27 1593 aaKnown RBP28.2■■■□□ 2.11
MMS19-212ENST00000444411 RSF1Q96T23 1441 aaPredicted RBP28.12■■■□□ 2.09
MMS19-212ENST00000444411 MRC2Q9UBG0 1479 aa28.02■■■□□ 2.08
MMS19-212ENST00000444411 TOP2AP11388 1531 aaKnown RBP27.98■■■□□ 2.07
MMS19-212ENST00000444411 CEP164Q9UPV0 1460 aa27.96■■■□□ 2.07
MMS19-212ENST00000444411 FANCD2Q9BXW9 1451 aa27.93■■■□□ 2.06
MMS19-212ENST00000444411 CFTRP13569 1480 aa27.9■■■□□ 2.06
MMS19-212ENST00000444411 WDR62O43379 1518 aa27.88■■■□□ 2.05
MMS19-212ENST00000444411 CCDC88BA6NC98 1476 aa27.7■■■□□ 2.02
MMS19-212ENST00000444411 PRDM2Q13029 1718 aa27.63■■■□□ 2.01
MMS19-212ENST00000444411 URB2Q14146 1524 aaKnown RBP27.62■■■□□ 2.01
MMS19-212ENST00000444411 OSCARQ8IYS5 282 aa27.49■■□□□ 1.99
MMS19-212ENST00000444411 TRIM41Q8WV44 630 aa27.47■■□□□ 1.99
MMS19-212ENST00000444411 ABCC8Q09428 1581 aa27.42■■□□□ 1.98
MMS19-212ENST00000444411 IFT140Q96RY7 1462 aa27.39■■□□□ 1.98
MMS19-212ENST00000444411 TOPBP1Q92547 1522 aa27.38■■□□□ 1.97
MMS19-212ENST00000444411 DNMBPQ6XZF7 1577 aa27.3■■□□□ 1.96
MMS19-212ENST00000444411 ZNF608Q9ULD9 1512 aaPredicted RBP27.27■■□□□ 1.96
MMS19-212ENST00000444411 SUPT5HO00267 1087 aaKnown RBP27.2■■□□□ 1.94
MMS19-212ENST00000444411 EIF4G3O43432 1585 aaKnown RBP27.13■■□□□ 1.93
MMS19-212ENST00000444411 AQRO60306 1485 aaKnown RBP eCLIP27.11■■□□□ 1.93
MMS19-212ENST00000444411 FBLN2P98095 1184 aa27.1■■□□□ 1.93
MMS19-212ENST00000444411 POLA1P09884 1462 aaPredicted RBP27.1■■□□□ 1.93
MMS19-212ENST00000444411 SOGA1O94964 1423 aa27.07■■□□□ 1.92
MMS19-212ENST00000444411 TARBP1Q13395 1621 aaKnown RBP27.07■■□□□ 1.92
MMS19-212ENST00000444411 RAD54L2Q9Y4B4 1467 aa27.02■■□□□ 1.92
MMS19-212ENST00000444411 TDRD9Q8NDG6 1382 aaKnown RBP26.98■■□□□ 1.91
MMS19-212ENST00000444411 FGD5Q6ZNL6 1462 aa26.97■■□□□ 1.91
MMS19-212ENST00000444411 RIMBP3CA6NJZ7 1639 aa26.95■■□□□ 1.91
MMS19-212ENST00000444411 RIMBP3BA6NNM3 1639 aa26.95■■□□□ 1.91
MMS19-212ENST00000444411 RIMBP3Q9UFD9 1639 aa26.95■■□□□ 1.91
MMS19-212ENST00000444411 CHD1O14646 1710 aa26.93■■□□□ 1.9
MMS19-212ENST00000444411 CUX1P39880 1505 aa26.91■■□□□ 1.9
MMS19-212ENST00000444411 ARHGEF11O15085 1522 aa26.89■■□□□ 1.89
MMS19-212ENST00000444411 CHMP7Q8WUX9 453 aaPredicted RBP26.88■■□□□ 1.89
MMS19-212ENST00000444411 WDR97A6NE52 1622 aa26.86■■□□□ 1.89
MMS19-212ENST00000444411 CYB5RLQ6IPT4 315 aa26.84■■□□□ 1.89
MMS19-212ENST00000444411 SNAPC4Q5SXM2 1469 aa26.81■■□□□ 1.88
MMS19-212ENST00000444411 GRIN2BQ13224 1484 aa26.79■■□□□ 1.88
MMS19-212ENST00000444411 MAGI1Q96QZ7 1491 aaPredicted RBP26.75■■□□□ 1.87
MMS19-212ENST00000444411 GAPVD1Q14C86 1478 aa26.72■■□□□ 1.87
MMS19-212ENST00000444411 SYNJ1O43426 1573 aa26.69■■□□□ 1.86
MMS19-212ENST00000444411 SYNJ2O15056 1496 aa26.67■■□□□ 1.86
MMS19-212ENST00000444411 WRNQ14191 1432 aaPredicted RBP eCLIP26.65■■□□□ 1.86
MMS19-212ENST00000444411 PBRM1Q86U86 1689 aa26.65■■□□□ 1.86
MMS19-212ENST00000444411 ABCA10Q8WWZ4 1543 aa26.65■■□□□ 1.86
MMS19-212ENST00000444411 TRHP20396 242 aaPredicted RBP26.61■■□□□ 1.85
MMS19-212ENST00000444411 ARAP1Q96P48 1450 aa26.6■■□□□ 1.85
MMS19-212ENST00000444411 CLASP1Q7Z460 1538 aa26.56■■□□□ 1.84
MMS19-212ENST00000444411 ABCA5Q8WWZ7 1642 aa26.54■■□□□ 1.84
MMS19-212ENST00000444411 TOP2BQ02880 1626 aa26.54■■□□□ 1.84
MMS19-212ENST00000444411 BIVM-ERCC5R4GMW8 1640 aa26.52■■□□□ 1.84
MMS19-212ENST00000444411 GRIN2AQ12879 1464 aa26.41■■□□□ 1.82
MMS19-212ENST00000444411 FHAD1B1AJZ9 1412 aa26.38■■□□□ 1.81
MMS19-212ENST00000444411 ADAMTS12P58397 1594 aa26.36■■□□□ 1.81
MMS19-212ENST00000444411 ERICH3Q5RHP9 1530 aa26.34■■□□□ 1.81
MMS19-212ENST00000444411 NUP160Q12769 1436 aa26.27■■□□□ 1.8
MMS19-212ENST00000444411 CEP170Q5SW79 1584 aa26.25■■□□□ 1.79
MMS19-212ENST00000444411 JPH4Q96JJ6 628 aa26.16■■□□□ 1.78
MMS19-212ENST00000444411 ERCC6L2Q5T890 1561 aa26.16■■□□□ 1.78
MMS19-212ENST00000444411 KIF27Q86VH2 1401 aa26.14■■□□□ 1.77
MMS19-212ENST00000444411 PRG4Q92954 1404 aaPredicted RBP26.12■■□□□ 1.77
MMS19-212ENST00000444411 SHROOM2Q13796 1616 aa26.11■■□□□ 1.77
MMS19-212ENST00000444411 IGF1RP08069 1367 aa26.05■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms