RNA–Protein interactions for RNA: ENST00000443799.5

GAS5-216, Transcript of growth arrest specific 5, humanhuman

TSL 5

Gene GAS5, Length 897 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAS5-216ENST00000443799 AATFQ9NY61 560 aaKnown RBP eCLIP11.6□□□□□ -0.551e-46■■■■■ 69.1
GAS5-216ENST00000443799 NOLC1Q14978 699 aaKnown RBP eCLIP10.39□□□□□ -0.757e-112■■■■■ 65.8
GAS5-216ENST00000443799 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.03□□□□□ -1.127e-22■■■■■ 65.4
GAS5-216ENST00000443799 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.25□□□□□ -0.932e-30■■■■■ 62.3
GAS5-216ENST00000443799 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.49□□□□□ -0.893e-13■■■■■ 52.4
GAS5-216ENST00000443799 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.74□□□□□ -0.694e-37■■■■■ 51.8
GAS5-216ENST00000443799 SMNDC1O75940 238 aaKnown RBP eCLIP8.51□□□□□ -1.056e-39■■■■■ 45.9
GAS5-216ENST00000443799 AQRO60306 1485 aaKnown RBP eCLIP16.91■□□□□ 0.31e-24■■■■■ 42.2
GAS5-216ENST00000443799 DKC1O60832 514 aaKnown RBP eCLIP10.67□□□□□ -0.75e-48■■■■■ 35.5
GAS5-216ENST00000443799 PTBP1P26599 531 aaKnown RBP eCLIP7.22□□□□□ -1.253e-11■■■■■ 34.8
GAS5-216ENST00000443799 RBM22Q9NW64 420 aaKnown RBP eCLIP9.53□□□□□ -0.882e-36■■■■■ 28
GAS5-216ENST00000443799 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.65□□□□□ -0.862e-12■■■■□ 26.5
GAS5-216ENST00000443799 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.89□□□□□ -0.832e-20■■■■□ 26.4
GAS5-216ENST00000443799 NIPBLQ6KC79 2804 aaeCLIP8.36□□□□□ -1.075e-14■■■■□ 26
GAS5-216ENST00000443799 SF3B1O75533 1304 aaKnown RBP eCLIP10.4□□□□□ -0.744e-8■■■■□ 24.2
GAS5-216ENST00000443799 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.08□□□□□ -0.83e-20■■■■□ 23.9
GAS5-216ENST00000443799 EFTUD2Q15029 972 aaKnown RBP eCLIP8.95□□□□□ -0.984e-22■■■■□ 23.6
GAS5-216ENST00000443799 SF3B4Q15427 424 aaKnown RBP eCLIP8.65□□□□□ -1.029e-25■■■■□ 23.5
GAS5-216ENST00000443799 KHSRPQ92945 711 aaKnown RBP eCLIP10.48□□□□□ -0.736e-13■■■■□ 22
GAS5-216ENST00000443799 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10□□□□□ -0.811e-14■■■■□ 20.4
GAS5-216ENST00000443799 NCBP2P52298 156 aaKnown RBP eCLIP8.68□□□□□ -1.021e-25■■■□□ 19.2
GAS5-216ENST00000443799 NKRFO15226 690 aaKnown RBP eCLIP11.03□□□□□ -0.641e-12■■■□□ 18.9
GAS5-216ENST00000443799 SSBP05455 408 aaKnown RBP eCLIP10.44□□□□□ -0.745e-7■■■□□ 18.5
GAS5-216ENST00000443799 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.94□□□□□ -0.661e-18■■■□□ 17.9
GAS5-216ENST00000443799 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.62□□□□□ -0.072e-13■■■□□ 17.6
GAS5-216ENST00000443799 TROVE2P10155 538 aaKnown RBP eCLIP8.36□□□□□ -1.071e-76■■■□□ 17.5
GAS5-216ENST00000443799 SUB1P53999 127 aaKnown RBP eCLIP7.1□□□□□ -1.271e-15■■■□□ 16.8
GAS5-216ENST00000443799 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.79□□□□□ -11e-7■■■□□ 15.8
GAS5-216ENST00000443799 TRA2AQ13595 282 aaKnown RBP eCLIP9.37□□□□□ -0.913e-41■■■□□ 15.7
GAS5-216ENST00000443799 PABPC4Q13310 644 aaKnown RBP eCLIP11.46□□□□□ -0.573e-27■■■□□ 15.3
GAS5-216ENST00000443799 AARSP49588 968 aaKnown RBP eCLIP10.34□□□□□ -0.752e-7■■■□□ 15
GAS5-216ENST00000443799 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.7□□□□□ -1.024e-24■■■□□ 15
GAS5-216ENST00000443799 GPKOWQ92917 476 aaPredicted RBP eCLIP10.94□□□□□ -0.665e-39■■■□□ 14.9
GAS5-216ENST00000443799 NIP7Q9Y221 180 aaKnown RBP eCLIP12.43□□□□□ -0.422e-35■■■□□ 14.7
GAS5-216ENST00000443799 DDX21Q9NR30 783 aaKnown RBP eCLIP12.39□□□□□ -0.432e-26■■■□□ 14.6
GAS5-216ENST00000443799 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.7□□□□□ -0.546e-37■■□□□ 14.2
GAS5-216ENST00000443799 YBX3P16989 372 aaKnown RBP eCLIP12.61□□□□□ -0.392e-39■■□□□ 14.2
GAS5-216ENST00000443799 ZRANB2O95218 330 aaKnown RBP eCLIP9.49□□□□□ -0.891e-27■■□□□ 14.1
GAS5-216ENST00000443799 SF3A3Q12874 501 aaKnown RBP eCLIP8.31□□□□□ -1.084e-20■■□□□ 14
GAS5-216ENST00000443799 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.32□□□□□ -0.62e-11■■□□□ 13.9
GAS5-216ENST00000443799 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.94□□□□□ -0.986e-7■■□□□ 13.8
GAS5-216ENST00000443799 WDR43Q15061 677 aaKnown RBP eCLIP12.52□□□□□ -0.411e-14■■□□□ 13.7
GAS5-216ENST00000443799 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.83□□□□□ -0.843e-20■■□□□ 13
GAS5-216ENST00000443799 PCBP1Q15365 356 aaKnown RBP eCLIP10.59□□□□□ -0.715e-13■■□□□ 12.9
GAS5-216ENST00000443799 XRCC6P12956 609 aaKnown RBP eCLIP10.63□□□□□ -0.716e-21■■□□□ 12.8
GAS5-216ENST00000443799 NPM1P06748 294 aaKnown RBP eCLIP16.04■□□□□ 0.161e-27■■□□□ 12.8
GAS5-216ENST00000443799 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.51□□□□□ -0.571e-18■■□□□ 12.4
GAS5-216ENST00000443799 SRSF9Q13242 221 aaKnown RBP eCLIP5.9□□□□□ -1.466e-11■■□□□ 12.3
GAS5-216ENST00000443799 LARP4Q71RC2 724 aaKnown RBP eCLIP8.66□□□□□ -1.028e-12■■□□□ 12.2
GAS5-216ENST00000443799 TIA1P31483 386 aaKnown RBP eCLIP8.74□□□□□ -1.012e-7■■□□□ 12.2
GAS5-216ENST00000443799 PPIGQ13427 754 aaKnown RBP eCLIP10.95□□□□□ -0.661e-12■■□□□ 11.8
GAS5-216ENST00000443799 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.39□□□□□ -0.598e-28■□□□□ 11.3
GAS5-216ENST00000443799 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.24□□□□□ -0.934e-49■□□□□ 11
GAS5-216ENST00000443799 HNRNPCP07910 306 aaKnown RBP eCLIP6.98□□□□□ -1.293e-10■□□□□ 10.6
GAS5-216ENST00000443799 CDC40O60508 579 aaKnown RBP eCLIP8.73□□□□□ -1.011e-10■□□□□ 10.3
GAS5-216ENST00000443799 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.43■□□□□ 0.063e-8■□□□□ 10.1
GAS5-216ENST00000443799 RPS3P23396 243 aaKnown RBP eCLIP9.21□□□□□ -0.947e-16■□□□□ 10.1
GAS5-216ENST00000443799 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.3□□□□□ -0.61e-8■□□□□ 10.1
GAS5-216ENST00000443799 LSM11P83369 360 aaKnown RBP eCLIP8.28□□□□□ -1.084e-11■□□□□ 9.8
GAS5-216ENST00000443799 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.31□□□□□ -0.128e-26■□□□□ 9.5
GAS5-216ENST00000443799 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.41□□□□□ -0.741e-19■□□□□ 9.4
GAS5-216ENST00000443799 U2AF2P26368 475 aaKnown RBP eCLIP10.64□□□□□ -0.711e-7■□□□□ 9.2
GAS5-216ENST00000443799 DDX6P26196 483 aaKnown RBP eCLIP10.15□□□□□ -0.782e-21■□□□□ 9.1
GAS5-216ENST00000443799 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.61□□□□□ -0.072e-8■□□□□ 9
GAS5-216ENST00000443799 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.77□□□□□ -0.692e-13■□□□□ 8.5
GAS5-216ENST00000443799 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.01□□□□□ -0.331e-13■□□□□ 8.5
GAS5-216ENST00000443799 RPS11P62280 158 aaKnown RBP eCLIP7.69□□□□□ -1.182e-9■□□□□ 8.4
GAS5-216ENST00000443799 RBFOX2O43251 390 aaKnown RBP eCLIP7.31□□□□□ -1.245e-14■□□□□ 8.4
GAS5-216ENST00000443799 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.98□□□□□ -0.814e-10■□□□□ 8.3
GAS5-216ENST00000443799 EIF3DO15371 548 aaKnown RBP eCLIP10.29□□□□□ -0.764e-7■□□□□ 8
Retrieved 70 of 70 RNA–protein pairs in 10.9 ms