RNA–Protein interactions for RNA: ENST00000443462.6

SEC31A-207, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

TSL 2 BASIC

Gene SEC31A, Length 4,042 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-207ENST00000443462 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.62□□□□□ -1.191e-10■■■■■ 52
SEC31A-207ENST00000443462 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.97□□□□□ -1.293e-6■■■■■ 50.8
SEC31A-207ENST00000443462 TARDBPQ13148 414 aaKnown RBP eCLIP6.76□□□□□ -1.332e-8■■■■■ 33.5
SEC31A-207ENST00000443462 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.03□□□□□ -1.282e-7■■■■■ 32.8
SEC31A-207ENST00000443462 RBM22Q9NW64 420 aaKnown RBP eCLIP7.14□□□□□ -1.272e-6■■■■□ 25.6
SEC31A-207ENST00000443462 MATR3P43243 847 aaKnown RBP eCLIP7.52□□□□□ -1.215e-7■■■■□ 23.2
SEC31A-207ENST00000443462 SUB1P53999 127 aaKnown RBP eCLIP5.19□□□□□ -1.586e-18■■■■□ 22.9
SEC31A-207ENST00000443462 EFTUD2Q15029 972 aaKnown RBP eCLIP7.1□□□□□ -1.276e-8■■■■□ 22.8
SEC31A-207ENST00000443462 SF3B4Q15427 424 aaKnown RBP eCLIP6.02□□□□□ -1.457e-7■■■■□ 22.6
SEC31A-207ENST00000443462 PABPN1Q86U42 306 aaKnown RBP eCLIP14.04□□□□□ -0.162e-7■■■■□ 22
SEC31A-207ENST00000443462 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.94□□□□□ -1.464e-7■■■■□ 21.7
SEC31A-207ENST00000443462 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.86□□□□□ -1.472e-8■■■■□ 21.3
SEC31A-207ENST00000443462 AQRO60306 1485 aaKnown RBP eCLIP12.63□□□□□ -0.397e-7■■■■□ 21.1
SEC31A-207ENST00000443462 HNRNPMP52272 730 aaKnown RBP eCLIP11.25□□□□□ -0.618e-7■■■■□ 21
SEC31A-207ENST00000443462 IGF2BP3O00425 579 aaKnown RBP eCLIP8.49□□□□□ -1.054e-7■■■■□ 20.7
SEC31A-207ENST00000443462 PABPC4Q13310 644 aaKnown RBP eCLIP8.13□□□□□ -1.111e-9■■■■□ 20.4
SEC31A-207ENST00000443462 QKIQ96PU8 341 aaKnown RBP eCLIP7.27□□□□□ -1.255e-7■■■■□ 20.3
SEC31A-207ENST00000443462 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.17□□□□□ -1.422e-6■■■■□ 19.5
SEC31A-207ENST00000443462 ZC3H11AO75152 810 aaKnown RBP eCLIP7.62□□□□□ -1.193e-10■■■□□ 18.9
SEC31A-207ENST00000443462 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.74□□□□□ -1.332e-8■■■□□ 18.8
SEC31A-207ENST00000443462 GPKOWQ92917 476 aaPredicted RBP eCLIP8.29□□□□□ -1.082e-6■■■□□ 18.2
SEC31A-207ENST00000443462 CSTF2P33240 577 aaKnown RBP eCLIP6.6□□□□□ -1.354e-8■■■□□ 17.3
SEC31A-207ENST00000443462 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.88□□□□□ -1.153e-9■■■□□ 17.2
SEC31A-207ENST00000443462 KHSRPQ92945 711 aaKnown RBP eCLIP7.68□□□□□ -1.183e-9■■■□□ 16.9
SEC31A-207ENST00000443462 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.15□□□□□ -1.433e-7■■■□□ 16.7
SEC31A-207ENST00000443462 HNRNPLP14866 589 aaKnown RBP eCLIP7.4□□□□□ -1.221e-8■■■□□ 16.5
SEC31A-207ENST00000443462 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.49□□□□□ -1.217e-15■■■□□ 16.1
SEC31A-207ENST00000443462 DDX42Q86XP3 938 aaKnown RBP eCLIP7.25□□□□□ -1.253e-6■■■□□ 16.1
SEC31A-207ENST00000443462 DDX3XO00571 662 aaKnown RBP eCLIP7.6□□□□□ -1.193e-14■■■□□ 15.9
SEC31A-207ENST00000443462 FXR1P51114 621 aaKnown RBP eCLIP7.74□□□□□ -1.172e-6■■■□□ 15.9
SEC31A-207ENST00000443462 TRA2AQ13595 282 aaKnown RBP eCLIP6.73□□□□□ -1.331e-7■■■□□ 15.7
SEC31A-207ENST00000443462 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.61□□□□□ -1.034e-29■■■□□ 15.4
SEC31A-207ENST00000443462 PCBP2Q15366 365 aaKnown RBP eCLIP6.86□□□□□ -1.315e-11■■■□□ 15.4
SEC31A-207ENST00000443462 SRSF1Q07955 248 aaKnown RBP eCLIP6.54□□□□□ -1.369e-7■■■□□ 15.2
SEC31A-207ENST00000443462 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.51□□□□□ -1.056e-8■■■□□ 14.8
SEC31A-207ENST00000443462 U2AF2P26368 475 aaKnown RBP eCLIP8.29□□□□□ -1.082e-7■■□□□ 14.5
SEC31A-207ENST00000443462 HNRNPKP61978 463 aaKnown RBP eCLIP6.85□□□□□ -1.316e-7■■□□□ 14.4
SEC31A-207ENST00000443462 EIF3HO15372 352 aaKnown RBP eCLIP7.01□□□□□ -1.291e-6■■□□□ 14.3
SEC31A-207ENST00000443462 U2AF1Q01081 240 aaKnown RBP eCLIP9.53□□□□□ -0.882e-7■■□□□ 14.3
SEC31A-207ENST00000443462 SF3A3Q12874 501 aaKnown RBP eCLIP6.6□□□□□ -1.358e-7■■□□□ 14.1
SEC31A-207ENST00000443462 HLTFQ14527 1009 aaKnown RBP eCLIP6.99□□□□□ -1.293e-8■■□□□ 13.9
SEC31A-207ENST00000443462 PPIGQ13427 754 aaKnown RBP eCLIP7.71□□□□□ -1.185e-8■■□□□ 13.8
SEC31A-207ENST00000443462 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.85□□□□□ -1.155e-7■■□□□ 13.8
SEC31A-207ENST00000443462 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.46□□□□□ -1.223e-7■■□□□ 13.8
SEC31A-207ENST00000443462 FMR1Q06787 632 aaKnown RBP eCLIP8.75□□□□□ -1.016e-7■■□□□ 13.6
SEC31A-207ENST00000443462 PUM1Q14671 1186 aaKnown RBP eCLIP6.68□□□□□ -1.342e-6■■□□□ 13.4
SEC31A-207ENST00000443462 TIA1P31483 386 aaKnown RBP eCLIP6.66□□□□□ -1.342e-6■■□□□ 13.3
SEC31A-207ENST00000443462 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.44□□□□□ -1.222e-19■■□□□ 13.3
SEC31A-207ENST00000443462 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.64□□□□□ -0.872e-13■■□□□ 13.3
SEC31A-207ENST00000443462 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.9□□□□□ -0.834e-7■■□□□ 13.2
SEC31A-207ENST00000443462 ILF3Q12906 894 aaKnown RBP eCLIP6.79□□□□□ -1.322e-11■■□□□ 12.8
SEC31A-207ENST00000443462 NIPBLQ6KC79 2804 aaeCLIP6.13□□□□□ -1.432e-6■■□□□ 12.5
SEC31A-207ENST00000443462 PUS1Q9Y606 427 aaKnown RBP eCLIP5.26□□□□□ -1.575e-6■■□□□ 12.4
SEC31A-207ENST00000443462 PRPF4O43172 522 aaKnown RBP eCLIP6.89□□□□□ -1.311e-6■■□□□ 12.3
SEC31A-207ENST00000443462 PCBP1Q15365 356 aaKnown RBP eCLIP7.78□□□□□ -1.169e-27■■□□□ 12.2
SEC31A-207ENST00000443462 RBFOX2O43251 390 aaKnown RBP eCLIP5.55□□□□□ -1.523e-22■■□□□ 12.2
SEC31A-207ENST00000443462 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.7□□□□□ -0.74e-7■■□□□ 12.2
SEC31A-207ENST00000443462 TIAL1Q01085 375 aaKnown RBP eCLIP7.23□□□□□ -1.253e-7■■□□□ 12.1
SEC31A-207ENST00000443462 SF3B1O75533 1304 aaKnown RBP eCLIP7.57□□□□□ -1.24e-7■■□□□ 12.1
SEC31A-207ENST00000443462 HNRNPCP07910 306 aaKnown RBP eCLIP5.26□□□□□ -1.579e-7■■□□□ 11.9
SEC31A-207ENST00000443462 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.34□□□□□ -1.391e-6■■□□□ 11.5
SEC31A-207ENST00000443462 YBX3P16989 372 aaKnown RBP eCLIP9.1□□□□□ -0.955e-10■□□□□ 11.2
SEC31A-207ENST00000443462 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.36□□□□□ -1.239e-9■□□□□ 11.2
SEC31A-207ENST00000443462 RPS3P23396 243 aaKnown RBP eCLIP7.01□□□□□ -1.292e-7■□□□□ 11.2
SEC31A-207ENST00000443462 PTBP1P26599 531 aaKnown RBP eCLIP5.67□□□□□ -1.56e-8■□□□□ 11.1
SEC31A-207ENST00000443462 FXR2P51116 673 aaKnown RBP eCLIP8.11□□□□□ -1.111e-8■□□□□ 11.1
SEC31A-207ENST00000443462 DDX6P26196 483 aaKnown RBP eCLIP7.36□□□□□ -1.232e-13■□□□□ 10.7
SEC31A-207ENST00000443462 LSM11P83369 360 aaKnown RBP eCLIP6.52□□□□□ -1.378e-8■□□□□ 10.5
SEC31A-207ENST00000443462 G3BP1Q13283 466 aaKnown RBP eCLIP8.73□□□□□ -1.012e-7■□□□□ 10.2
SEC31A-207ENST00000443462 WDR43Q15061 677 aaKnown RBP eCLIP9.4□□□□□ -0.96e-7■□□□□ 9.8
SEC31A-207ENST00000443462 XRCC6P12956 609 aaKnown RBP eCLIP7.95□□□□□ -1.142e-6■□□□□ 9.8
SEC31A-207ENST00000443462 ZNF622Q969S3 477 aaKnown RBP eCLIP8.83□□□□□ -17e-8■□□□□ 9.4
SEC31A-207ENST00000443462 SND1Q7KZF4 910 aaKnown RBP eCLIP7.16□□□□□ -1.261e-8■□□□□ 9.2
SEC31A-207ENST00000443462 FUBP3Q96I24 572 aaKnown RBP eCLIP7.53□□□□□ -1.21e-8■□□□□ 8.3
Retrieved 74 of 74 RNA–protein pairs in 151.6 ms