RNA–Protein interactions for RNA: ENST00000443353.5

PDK1-208, Transcript of pyruvate dehydrogenase kinase 1, humanhuman

TSL 2

Gene PDK1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDK1-208ENST00000443353 NISCHQ9Y2I1 1504 aa26.14■■□□□ 1.78
PDK1-208ENST00000443353 ABCC9O60706 1549 aa23.5■■□□□ 1.35
PDK1-208ENST00000443353 CCDC180Q9P1Z9 1646 aa23.34■■□□□ 1.33
PDK1-208ENST00000443353 RB1CC1Q8TDY2 1594 aa22.25■■□□□ 1.15
PDK1-208ENST00000443353 DNAJC5BQ9UF47 199 aa22.17■■□□□ 1.14
PDK1-208ENST00000443353 NACADO15069 1562 aa22.12■■□□□ 1.13
PDK1-208ENST00000443353 DCAF8L2P0C7V8 631 aa22.09■■□□□ 1.13
PDK1-208ENST00000443353 PABPN1Q86U42 306 aaKnown RBP eCLIP21.94■■□□□ 1.1
PDK1-208ENST00000443353 MYO15BQ96JP2 1530 aa21.81■■□□□ 1.08
PDK1-208ENST00000443353 UNC13AQ9UPW8 1703 aa21.75■■□□□ 1.07
PDK1-208ENST00000443353 BICRAQ9NZM4 1560 aa21.72■■□□□ 1.07
PDK1-208ENST00000443353 ZCCHC6Q5VYS8 1495 aaKnown RBP21.68■■□□□ 1.06
PDK1-208ENST00000443353 DCAF1Q9Y4B6 1507 aa21.55■■□□□ 1.04
PDK1-208ENST00000443353 SCRIBQ14160 1630 aa21.37■■□□□ 1.01
PDK1-208ENST00000443353 SHROOM4Q9ULL8 1493 aa21.29■■□□□ 1
PDK1-208ENST00000443353 CC2D2AQ9P2K1 1620 aa21.18■□□□□ 0.98
PDK1-208ENST00000443353 EIF4G1Q04637 1599 aaKnown RBP21.14■□□□□ 0.98
PDK1-208ENST00000443353 CECR2Q9BXF3 1484 aa21.14■□□□□ 0.98
PDK1-208ENST00000443353 NCAPD3P42695 1498 aa20.49■□□□□ 0.87
PDK1-208ENST00000443353 ATAD2BQ9ULI0 1458 aa20.44■□□□□ 0.86
PDK1-208ENST00000443353 SMARCA4P51532 1647 aa20.36■□□□□ 0.85
PDK1-208ENST00000443353 SMARCA2P51531 1590 aa20.29■□□□□ 0.84
PDK1-208ENST00000443353 HMGXB3Q12766 1538 aa20.27■□□□□ 0.84
PDK1-208ENST00000443353 DNAJC5Q9H3Z4 198 aa20.25■□□□□ 0.83
PDK1-208ENST00000443353 BAZ1AQ9NRL2 1556 aaPredicted RBP20.24■□□□□ 0.83
PDK1-208ENST00000443353 NESP48681 1621 aa20.22■□□□□ 0.83
PDK1-208ENST00000443353 ERCC6Q03468 1493 aa20.22■□□□□ 0.83
PDK1-208ENST00000443353 BAZ1BQ9UIG0 1483 aaKnown RBP20.19■□□□□ 0.82
PDK1-208ENST00000443353 MROH2BQ7Z745 1585 aa20.19■□□□□ 0.82
PDK1-208ENST00000443353 CUX2O14529 1486 aa20.18■□□□□ 0.82
PDK1-208ENST00000443353 PEG3Q9GZU2 1588 aa20.17■□□□□ 0.82
PDK1-208ENST00000443353 LAMC3Q9Y6N6 1575 aa19.95■□□□□ 0.78
PDK1-208ENST00000443353 THOC2Q8NI27 1593 aaKnown RBP19.94■□□□□ 0.78
PDK1-208ENST00000443353 WIZO95785 1651 aa19.91■□□□□ 0.78
PDK1-208ENST00000443353 CADPSQ9ULU8 1353 aa19.86■□□□□ 0.77
PDK1-208ENST00000443353 PDS5BQ9NTI5 1447 aa19.85■□□□□ 0.77
PDK1-208ENST00000443353 KIF21AQ7Z4S6 1674 aa19.84■□□□□ 0.77
PDK1-208ENST00000443353 RSF1Q96T23 1441 aaPredicted RBP19.77■□□□□ 0.76
PDK1-208ENST00000443353 MRC2Q9UBG0 1479 aa19.71■□□□□ 0.75
PDK1-208ENST00000443353 WDR62O43379 1518 aa19.66■□□□□ 0.74
PDK1-208ENST00000443353 CFTRP13569 1480 aa19.64■□□□□ 0.73
PDK1-208ENST00000443353 TOP2AP11388 1531 aaKnown RBP19.63■□□□□ 0.73
PDK1-208ENST00000443353 FANCD2Q9BXW9 1451 aa19.63■□□□□ 0.73
PDK1-208ENST00000443353 CEP164Q9UPV0 1460 aa19.61■□□□□ 0.73
PDK1-208ENST00000443353 URB2Q14146 1524 aaKnown RBP19.51■□□□□ 0.71
PDK1-208ENST00000443353 CCDC88BA6NC98 1476 aa19.47■□□□□ 0.71
PDK1-208ENST00000443353 TRIM41Q8WV44 630 aa19.36■□□□□ 0.69
PDK1-208ENST00000443353 ZNF608Q9ULD9 1512 aaPredicted RBP19.29■□□□□ 0.68
PDK1-208ENST00000443353 OSCARQ8IYS5 282 aa19.28■□□□□ 0.68
PDK1-208ENST00000443353 TOPBP1Q92547 1522 aa19.26■□□□□ 0.67
PDK1-208ENST00000443353 PRDM2Q13029 1718 aa19.26■□□□□ 0.67
PDK1-208ENST00000443353 IFT140Q96RY7 1462 aa19.23■□□□□ 0.67
PDK1-208ENST00000443353 DNMBPQ6XZF7 1577 aa19.15■□□□□ 0.66
PDK1-208ENST00000443353 ABCC8Q09428 1581 aa19.13■□□□□ 0.65
PDK1-208ENST00000443353 AQRO60306 1485 aaKnown RBP eCLIP19.1■□□□□ 0.659e-7■■■□□ 18.2
PDK1-208ENST00000443353 EIF4G3O43432 1585 aaKnown RBP19.1■□□□□ 0.65
PDK1-208ENST00000443353 TARBP1Q13395 1621 aaKnown RBP19.08■□□□□ 0.65
PDK1-208ENST00000443353 POLA1P09884 1462 aaPredicted RBP19.08■□□□□ 0.64
PDK1-208ENST00000443353 RAD54L2Q9Y4B4 1467 aa19.05■□□□□ 0.64
PDK1-208ENST00000443353 RIMBP3CA6NJZ7 1639 aa19.03■□□□□ 0.64
PDK1-208ENST00000443353 RIMBP3BA6NNM3 1639 aa19.03■□□□□ 0.64
PDK1-208ENST00000443353 RIMBP3Q9UFD9 1639 aa19.03■□□□□ 0.64
PDK1-208ENST00000443353 ARHGEF11O15085 1522 aa19■□□□□ 0.63
PDK1-208ENST00000443353 TDRD9Q8NDG6 1382 aaKnown RBP18.99■□□□□ 0.63
PDK1-208ENST00000443353 SOGA1O94964 1423 aa18.98■□□□□ 0.63
PDK1-208ENST00000443353 CUX1P39880 1505 aa18.95■□□□□ 0.62
PDK1-208ENST00000443353 FGD5Q6ZNL6 1462 aa18.95■□□□□ 0.62
PDK1-208ENST00000443353 FBLN2P98095 1184 aa18.93■□□□□ 0.62
PDK1-208ENST00000443353 CHD1O14646 1710 aa18.91■□□□□ 0.62
PDK1-208ENST00000443353 SUPT5HO00267 1087 aaKnown RBP18.9■□□□□ 0.62
PDK1-208ENST00000443353 CYB5RLQ6IPT4 315 aa18.88■□□□□ 0.61
PDK1-208ENST00000443353 SNAPC4Q5SXM2 1469 aa18.87■□□□□ 0.61
PDK1-208ENST00000443353 ARAP1Q96P48 1450 aa18.84■□□□□ 0.61
PDK1-208ENST00000443353 WDR97A6NE52 1622 aa18.78■□□□□ 0.6
PDK1-208ENST00000443353 GRIN2BQ13224 1484 aa18.78■□□□□ 0.6
PDK1-208ENST00000443353 CHMP7Q8WUX9 453 aaPredicted RBP18.77■□□□□ 0.6
PDK1-208ENST00000443353 CLASP1Q7Z460 1538 aa18.77■□□□□ 0.6
PDK1-208ENST00000443353 MAGI1Q96QZ7 1491 aaPredicted RBP18.76■□□□□ 0.59
PDK1-208ENST00000443353 SYNJ2O15056 1496 aa18.73■□□□□ 0.59
PDK1-208ENST00000443353 GAPVD1Q14C86 1478 aa18.73■□□□□ 0.59
PDK1-208ENST00000443353 ABCA10Q8WWZ4 1543 aa18.71■□□□□ 0.59
PDK1-208ENST00000443353 SYNJ1O43426 1573 aa18.68■□□□□ 0.58
PDK1-208ENST00000443353 ABCA5Q8WWZ7 1642 aa18.67■□□□□ 0.58
PDK1-208ENST00000443353 PBRM1Q86U86 1689 aa18.66■□□□□ 0.58
PDK1-208ENST00000443353 TRHP20396 242 aaPredicted RBP18.63■□□□□ 0.57
PDK1-208ENST00000443353 WRNQ14191 1432 aaPredicted RBP eCLIP18.62■□□□□ 0.57
PDK1-208ENST00000443353 TOP2BQ02880 1626 aa18.59■□□□□ 0.57
PDK1-208ENST00000443353 BIVM-ERCC5R4GMW8 1640 aa18.57■□□□□ 0.56
PDK1-208ENST00000443353 GRIN2AQ12879 1464 aa18.56■□□□□ 0.56
PDK1-208ENST00000443353 ADAMTS12P58397 1594 aa18.54■□□□□ 0.56
PDK1-208ENST00000443353 ERCC6L2Q5T890 1561 aa18.54■□□□□ 0.56
PDK1-208ENST00000443353 NUP160Q12769 1436 aa18.52■□□□□ 0.56
PDK1-208ENST00000443353 CEP170Q5SW79 1584 aa18.51■□□□□ 0.55
PDK1-208ENST00000443353 FHAD1B1AJZ9 1412 aa18.49■□□□□ 0.55
PDK1-208ENST00000443353 ERICH3Q5RHP9 1530 aa18.45■□□□□ 0.54
PDK1-208ENST00000443353 SHROOM2Q13796 1616 aa18.39■□□□□ 0.53
PDK1-208ENST00000443353 PRG4Q92954 1404 aaPredicted RBP18.33■□□□□ 0.53
PDK1-208ENST00000443353 JPH4Q96JJ6 628 aa18.33■□□□□ 0.52
PDK1-208ENST00000443353 IGF1RP08069 1367 aa18.3■□□□□ 0.52
PDK1-208ENST00000443353 RUSC2Q8N2Y8 1516 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms