RNA–Protein interactions for RNA: ENST00000443308.6

SHISA5-209, Transcript of shisa family member 5, humanhuman

TSL 2 BASIC

Gene SHISA5, Length 1,933 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA5-209ENST00000443308 NISCHQ9Y2I1 1504 aa36.32■■■■□ 3.4
SHISA5-209ENST00000443308 CCDC180Q9P1Z9 1646 aa31.54■■■□□ 2.64
SHISA5-209ENST00000443308 ZCCHC6Q5VYS8 1495 aaKnown RBP30.59■■■□□ 2.49
SHISA5-209ENST00000443308 DCAF1Q9Y4B6 1507 aa30.15■■■□□ 2.42
SHISA5-209ENST00000443308 MYO15BQ96JP2 1530 aa29.69■■■□□ 2.34
SHISA5-209ENST00000443308 DCAF8L2P0C7V8 631 aa29.69■■■□□ 2.34
SHISA5-209ENST00000443308 SHROOM4Q9ULL8 1493 aa29.66■■■□□ 2.34
SHISA5-209ENST00000443308 ABCC9O60706 1549 aa29.33■■■□□ 2.29
SHISA5-209ENST00000443308 NACADO15069 1562 aa29.3■■■□□ 2.28
SHISA5-209ENST00000443308 RB1CC1Q8TDY2 1594 aa28.92■■■□□ 2.22
SHISA5-209ENST00000443308 SCRIBQ14160 1630 aa28.89■■■□□ 2.22
SHISA5-209ENST00000443308 SUPT5HO00267 1087 aaKnown RBP28.77■■■□□ 2.2
SHISA5-209ENST00000443308 RSF1Q96T23 1441 aaPredicted RBP28.3■■■□□ 2.12
SHISA5-209ENST00000443308 UNC13AQ9UPW8 1703 aa28.27■■■□□ 2.12
SHISA5-209ENST00000443308 CECR2Q9BXF3 1484 aa28.11■■■□□ 2.09
SHISA5-209ENST00000443308 BAZ1AQ9NRL2 1556 aaPredicted RBP28.03■■■□□ 2.08
SHISA5-209ENST00000443308 MROH2BQ7Z745 1585 aa28.01■■■□□ 2.07
SHISA5-209ENST00000443308 BICRAQ9NZM4 1560 aa28.01■■■□□ 2.07
SHISA5-209ENST00000443308 CHIC1Q5VXU3 224 aa27.82■■■□□ 2.04
SHISA5-209ENST00000443308 SMARCA4P51532 1647 aa27.81■■■□□ 2.04
SHISA5-209ENST00000443308 WIZO95785 1651 aa27.77■■■□□ 2.04
SHISA5-209ENST00000443308 PABPN1Q86U42 306 aaKnown RBP eCLIP27.71■■■□□ 2.03
SHISA5-209ENST00000443308 TOP2AP11388 1531 aaKnown RBP27.57■■■□□ 2
SHISA5-209ENST00000443308 PEG3Q9GZU2 1588 aa27.56■■■□□ 2
SHISA5-209ENST00000443308 SMARCA2P51531 1590 aa27.32■■□□□ 1.96
SHISA5-209ENST00000443308 ATAD2BQ9ULI0 1458 aa27.29■■□□□ 1.96
SHISA5-209ENST00000443308 CCDC88BA6NC98 1476 aa27.27■■□□□ 1.96
SHISA5-209ENST00000443308 EIF4G1Q04637 1599 aaKnown RBP27.24■■□□□ 1.95
SHISA5-209ENST00000443308 BAZ1BQ9UIG0 1483 aaKnown RBP27.13■■□□□ 1.93
SHISA5-209ENST00000443308 TRIM41Q8WV44 630 aa27.12■■□□□ 1.93
SHISA5-209ENST00000443308 NCAPD3P42695 1498 aa27.05■■□□□ 1.92
SHISA5-209ENST00000443308 HMGXB3Q12766 1538 aa27.03■■□□□ 1.92
SHISA5-209ENST00000443308 ABCC8Q09428 1581 aa26.73■■□□□ 1.87
SHISA5-209ENST00000443308 LOC105371045A0A1W2PR82 267 aa26.68■■□□□ 1.86
SHISA5-209ENST00000443308 WRNQ14191 1432 aaPredicted RBP eCLIP26.62■■□□□ 1.85
SHISA5-209ENST00000443308 CC2D2AQ9P2K1 1620 aa26.61■■□□□ 1.85
SHISA5-209ENST00000443308 EEA1Q15075 1411 aa26.53■■□□□ 1.84
SHISA5-209ENST00000443308 CFTRP13569 1480 aa26.53■■□□□ 1.84
SHISA5-209ENST00000443308 FAM9AQ8IZU1 332 aaPredicted RBP26.48■■□□□ 1.83
SHISA5-209ENST00000443308 SYNJ1O43426 1573 aa26.44■■□□□ 1.82
SHISA5-209ENST00000443308 TOP2BQ02880 1626 aa26.38■■□□□ 1.81
SHISA5-209ENST00000443308 PRDM2Q13029 1718 aa26.38■■□□□ 1.81
SHISA5-209ENST00000443308 BIVM-ERCC5R4GMW8 1640 aa26.34■■□□□ 1.81
SHISA5-209ENST00000443308 SOGA1O94964 1423 aa26.34■■□□□ 1.81
SHISA5-209ENST00000443308 CADPSQ9ULU8 1353 aa26.34■■□□□ 1.81
SHISA5-209ENST00000443308 CSRNP3Q8WYN3 585 aa26.26■■□□□ 1.79
SHISA5-209ENST00000443308 RUSC2Q8N2Y8 1516 aa26.19■■□□□ 1.78
SHISA5-209ENST00000443308 CUX1P39880 1505 aa26.18■■□□□ 1.78
SHISA5-209ENST00000443308 TNIKQ9UKE5 1360 aa26.11■■□□□ 1.77
SHISA5-209ENST00000443308 KIF21BO75037 1637 aa26.1■■□□□ 1.77
SHISA5-209ENST00000443308 GOLGA3Q08378 1498 aa26.09■■□□□ 1.77
SHISA5-209ENST00000443308 CEP164Q9UPV0 1460 aa26.07■■□□□ 1.76
SHISA5-209ENST00000443308 LAMC3Q9Y6N6 1575 aa26.04■■□□□ 1.76
SHISA5-209ENST00000443308 FANCD2Q9BXW9 1451 aa26.01■■□□□ 1.75
SHISA5-209ENST00000443308 EHMT2Q96KQ7 1210 aa25.98■■□□□ 1.75
SHISA5-209ENST00000443308 KIF27Q86VH2 1401 aa25.94■■□□□ 1.74
SHISA5-209ENST00000443308 CEP162Q5TB80 1403 aa25.93■■□□□ 1.74
SHISA5-209ENST00000443308 TRIM26Q12899 539 aaPredicted RBP25.89■■□□□ 1.74
SHISA5-209ENST00000443308 ERICH3Q5RHP9 1530 aa25.89■■□□□ 1.73
SHISA5-209ENST00000443308 UBTFP17480 764 aaKnown RBP25.88■■□□□ 1.73
SHISA5-209ENST00000443308 PRXQ9BXM0 1461 aa25.87■■□□□ 1.73
SHISA5-209ENST00000443308 DNMBPQ6XZF7 1577 aa25.87■■□□□ 1.73
SHISA5-209ENST00000443308 NESP48681 1621 aa25.86■■□□□ 1.73
SHISA5-209ENST00000443308 PCGF6Q9BYE7 350 aa25.86■■□□□ 1.73
SHISA5-209ENST00000443308 PDS5BQ9NTI5 1447 aa25.83■■□□□ 1.73
SHISA5-209ENST00000443308 FGD5Q6ZNL6 1462 aa25.83■■□□□ 1.72
SHISA5-209ENST00000443308 RAPGEF2Q9Y4G8 1499 aa25.81■■□□□ 1.72
SHISA5-209ENST00000443308 TOPBP1Q92547 1522 aa25.77■■□□□ 1.72
SHISA5-209ENST00000443308 CUX2O14529 1486 aa25.72■■□□□ 1.71
SHISA5-209ENST00000443308 DNAJC5BQ9UF47 199 aa25.71■■□□□ 1.71
SHISA5-209ENST00000443308 ABCA10Q8WWZ4 1543 aa25.68■■□□□ 1.7
SHISA5-209ENST00000443308 POLA1P09884 1462 aaPredicted RBP25.67■■□□□ 1.7
SHISA5-209ENST00000443308 IGF1RP08069 1367 aa25.66■■□□□ 1.7
SHISA5-209ENST00000443308 CLIP1P30622 1438 aa25.65■■□□□ 1.7
SHISA5-209ENST00000443308 URB2Q14146 1524 aaKnown RBP25.64■■□□□ 1.7
SHISA5-209ENST00000443308 KIF21AQ7Z4S6 1674 aa25.58■■□□□ 1.68
SHISA5-209ENST00000443308 RAD54L2Q9Y4B4 1467 aa25.53■■□□□ 1.68
SHISA5-209ENST00000443308 CARMIL1Q5VZK9 1371 aa25.52■■□□□ 1.68
SHISA5-209ENST00000443308 VPS8Q8N3P4 1428 aa25.52■■□□□ 1.68
SHISA5-209ENST00000443308 WDR97A6NE52 1622 aa25.52■■□□□ 1.68
SHISA5-209ENST00000443308 HRCP23327 699 aa25.49■■□□□ 1.67
SHISA5-209ENST00000443308 CUL7Q14999 1698 aa25.45■■□□□ 1.66
SHISA5-209ENST00000443308 MRC2Q9UBG0 1479 aa25.44■■□□□ 1.66
SHISA5-209ENST00000443308 ABCA5Q8WWZ7 1642 aa25.41■■□□□ 1.66
SHISA5-209ENST00000443308 TARBP1Q13395 1621 aaKnown RBP25.37■■□□□ 1.65
SHISA5-209ENST00000443308 ARAP1Q96P48 1450 aa25.35■■□□□ 1.65
SHISA5-209ENST00000443308 GAPVD1Q14C86 1478 aa25.33■■□□□ 1.65
SHISA5-209ENST00000443308 WDR62O43379 1518 aa25.31■■□□□ 1.64
SHISA5-209ENST00000443308 ARHGAP35Q9NRY4 1499 aa25.29■■□□□ 1.64
SHISA5-209ENST00000443308 PPARGC1BQ86YN6 1023 aaKnown RBP25.29■■□□□ 1.64
SHISA5-209ENST00000443308 TDRD9Q8NDG6 1382 aaKnown RBP25.25■■□□□ 1.63
SHISA5-209ENST00000443308 APLP2Q06481 763 aa25.24■■□□□ 1.63
SHISA5-209ENST00000443308 IFT140Q96RY7 1462 aa25.21■■□□□ 1.63
SHISA5-209ENST00000443308 RANGAP1P46060 587 aaPredicted RBP25.19■■□□□ 1.62
SHISA5-209ENST00000443308 CTTNBP2Q8WZ74 1663 aa25.16■■□□□ 1.62
SHISA5-209ENST00000443308 EFCAB5A4FU69 1503 aa25.16■■□□□ 1.62
SHISA5-209ENST00000443308 ERCC6Q03468 1493 aa25.15■■□□□ 1.62
SHISA5-209ENST00000443308 PBRM1Q86U86 1689 aa25.12■■□□□ 1.61
SHISA5-209ENST00000443308 ZEB1P37275 1124 aaPredicted RBP25.12■■□□□ 1.61
SHISA5-209ENST00000443308 MAP3K1Q13233 1512 aa25.11■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms