RNA–Protein interactions for RNA: ENST00000443081.5

RBM6-211, Transcript of RNA binding motif protein 6, humanhuman

TSL 5 BASIC

Gene RBM6, Length 4,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM6-211ENST00000443081 AGGF1Q8N302 714 aaeCLIP14.65□□□□□ -0.062e-25■■■□□ 14.9
RBM6-211ENST00000443081 QKIQ96PU8 341 aaKnown RBP eCLIP14.33□□□□□ -0.121e-19■■■■□ 25.2
RBM6-211ENST00000443081 ILF3Q12906 894 aaKnown RBP eCLIP12.96□□□□□ -0.333e-16■■■■■ 27.6
RBM6-211ENST00000443081 HNRNPLP14866 589 aaKnown RBP eCLIP14.12□□□□□ -0.159e-16■■■□□ 15.7
RBM6-211ENST00000443081 TROVE2P10155 538 aaKnown RBP eCLIP14.74□□□□□ -0.053e-13■■□□□ 11.4
RBM6-211ENST00000443081 SRSF1Q07955 248 aaKnown RBP eCLIP10.78□□□□□ -0.685e-13■■■■■ 39.6
RBM6-211ENST00000443081 ZRANB2O95218 330 aaKnown RBP eCLIP15.6■□□□□ 0.096e-12■■■■□ 20.7
RBM6-211ENST00000443081 PABPN1Q86U42 306 aaKnown RBP eCLIP21.25■□□□□ 0.994e-11■■■□□ 16.2
RBM6-211ENST00000443081 HNRNPKP61978 463 aaKnown RBP eCLIP12.58□□□□□ -0.42e-10■■■■□ 19.3
RBM6-211ENST00000443081 TIA1P31483 386 aaKnown RBP eCLIP13.43□□□□□ -0.263e-10■■■■■ 29.7
RBM6-211ENST00000443081 RBM22Q9NW64 420 aaKnown RBP eCLIP14.15□□□□□ -0.144e-10■■■■■ 38.1
RBM6-211ENST00000443081 XRCC6P12956 609 aaKnown RBP eCLIP17.18■□□□□ 0.347e-10■■■■□ 25.4
RBM6-211ENST00000443081 FXR2P51116 673 aaKnown RBP eCLIP15.36■□□□□ 0.059e-10■□□□□ 9.5
RBM6-211ENST00000443081 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.45□□□□□ -0.264e-9■■■□□ 16.5
RBM6-211ENST00000443081 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.14■□□□□ 0.019e-9■■■■□ 24.9
RBM6-211ENST00000443081 SF3A3Q12874 501 aaKnown RBP eCLIP15.08■□□□□ 01e-8■■■■■ 34
RBM6-211ENST00000443081 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.3■□□□□ 0.21e-8■■□□□ 13.1
RBM6-211ENST00000443081 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.94□□□□□ -0.342e-8■■□□□ 11.8
RBM6-211ENST00000443081 EIF4G2P78344 907 aaKnown RBP eCLIP19.34■□□□□ 0.692e-8■■■■□ 24.1
RBM6-211ENST00000443081 AQRO60306 1485 aaKnown RBP eCLIP19.34■□□□□ 0.694e-8■■□□□ 13.2
RBM6-211ENST00000443081 SAFBQ15424 915 aaKnown RBP eCLIP16.2■□□□□ 0.184e-8■■□□□ 14
RBM6-211ENST00000443081 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.18■□□□□ 0.024e-8■□□□□ 10.8
RBM6-211ENST00000443081 SMNDC1O75940 238 aaKnown RBP eCLIP14.37□□□□□ -0.114e-8■■■■□ 20.3
RBM6-211ENST00000443081 U2AF2P26368 475 aaKnown RBP eCLIP16.12■□□□□ 0.174e-8■■□□□ 12.8
RBM6-211ENST00000443081 PPIGQ13427 754 aaKnown RBP eCLIP13.44□□□□□ -0.265e-8■■□□□ 11.4
RBM6-211ENST00000443081 DDX3XO00571 662 aaKnown RBP eCLIP15.09■□□□□ 0.011e-7■■■■□ 23.4
RBM6-211ENST00000443081 KHSRPQ92945 711 aaKnown RBP eCLIP14.22□□□□□ -0.131e-7■■□□□ 12.9
RBM6-211ENST00000443081 EFTUD2Q15029 972 aaKnown RBP eCLIP14.57□□□□□ -0.081e-7■■■□□ 17
RBM6-211ENST00000443081 EIF3DO15371 548 aaKnown RBP eCLIP15.09■□□□□ 0.011e-7■□□□□ 8.4
RBM6-211ENST00000443081 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.93■□□□□ 0.141e-7■■■■□ 20
RBM6-211ENST00000443081 GTF2F1P35269 517 aaKnown RBP eCLIP16.14■□□□□ 0.171e-7■■■■■ 30.9
RBM6-211ENST00000443081 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.8■□□□□ 0.62e-7■■■□□ 17.3
RBM6-211ENST00000443081 DKC1O60832 514 aaKnown RBP eCLIP14.93□□□□□ -0.022e-7■■□□□ 13.6
RBM6-211ENST00000443081 ZNF622Q969S3 477 aaKnown RBP eCLIP15.27■□□□□ 0.042e-7■■■□□ 16.9
RBM6-211ENST00000443081 LSM11P83369 360 aaKnown RBP eCLIP13.08□□□□□ -0.322e-7■■□□□ 12.3
RBM6-211ENST00000443081 SF3B4Q15427 424 aaKnown RBP eCLIP13.18□□□□□ -0.32e-7■■■■□ 26.5
RBM6-211ENST00000443081 HNRNPMP52272 730 aaKnown RBP eCLIP18.74■□□□□ 0.592e-7■■■□□ 16.9
RBM6-211ENST00000443081 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.68□□□□□ -0.063e-7■□□□□ 10.2
RBM6-211ENST00000443081 TARDBPQ13148 414 aaKnown RBP eCLIP13.33□□□□□ -0.283e-7■■■■■ 47.2
RBM6-211ENST00000443081 PTBP1P26599 531 aaKnown RBP eCLIP12.97□□□□□ -0.334e-7■■■■■ 27.8
RBM6-211ENST00000443081 MATR3P43243 847 aaKnown RBP eCLIP15.57■□□□□ 0.084e-7■■■■□ 26.7
RBM6-211ENST00000443081 NCBP2P52298 156 aaKnown RBP eCLIP13.25□□□□□ -0.294e-7■■■□□ 17.9
RBM6-211ENST00000443081 TRA2AQ13595 282 aaKnown RBP eCLIP12.09□□□□□ -0.475e-7■■■■■ 30
RBM6-211ENST00000443081 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.78□□□□□ -0.685e-7■■■■□ 25.5
RBM6-211ENST00000443081 PCBP2Q15366 365 aaKnown RBP eCLIP13.68□□□□□ -0.226e-7■■■■■ 35.9
RBM6-211ENST00000443081 PRPF4O43172 522 aaKnown RBP eCLIP14.6□□□□□ -0.076e-7■■□□□ 13.2
RBM6-211ENST00000443081 EIF3HO15372 352 aaKnown RBP eCLIP15.21■□□□□ 0.036e-7■■□□□ 13.5
RBM6-211ENST00000443081 RBM15Q96T37 977 aaKnown RBP eCLIP14.81□□□□□ -0.049e-7■■□□□ 13.2
RBM6-211ENST00000443081 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.11■□□□□ 0.171e-6■■□□□ 12.4
RBM6-211ENST00000443081 GPKOWQ92917 476 aaPredicted RBP eCLIP15.7■□□□□ 0.11e-6■□□□□ 10.9
RBM6-211ENST00000443081 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.14■□□□□ 0.011e-6■■■■■ 90.4
RBM6-211ENST00000443081 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.28■□□□□ 0.21e-6■■■□□ 17.3
RBM6-211ENST00000443081 AARSP49588 968 aaKnown RBP eCLIP15.3■□□□□ 0.042e-6■■■□□ 15.7
RBM6-211ENST00000443081 PUM1Q14671 1186 aaKnown RBP eCLIP13.19□□□□□ -0.32e-6■□□□□ 9.6
RBM6-211ENST00000443081 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.14■□□□□ 0.012e-6■■■■■ 33.5
RBM6-211ENST00000443081 HNRNPCP07910 306 aaKnown RBP eCLIP13.87□□□□□ -0.193e-6■■□□□ 13.3
RBM6-211ENST00000443081 TIAL1Q01085 375 aaKnown RBP eCLIP13.69□□□□□ -0.223e-6■■■■□ 20.6
RBM6-211ENST00000443081 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.63■□□□□ 0.414e-6■□□□□ 10.3
RBM6-211ENST00000443081 LARP4Q71RC2 724 aaKnown RBP eCLIP13.88□□□□□ -0.195e-6■■■■□ 23.2
RBM6-211ENST00000443081 SF3B1O75533 1304 aaKnown RBP eCLIP14.15□□□□□ -0.145e-6■■■■■ 62.8
RBM6-211ENST00000443081 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.94□□□□□ -0.185e-6■■■■■ 31.7
RBM6-211ENST00000443081 WDR43Q15061 677 aaKnown RBP eCLIP18.48■□□□□ 0.556e-6■□□□□ 10.6
RBM6-211ENST00000443081 AATFQ9NY61 560 aaKnown RBP eCLIP15.79■□□□□ 0.126e-6■■■■■ 54.7
RBM6-211ENST00000443081 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.39□□□□□ -0.116e-6■■□□□ 12.6
RBM6-211ENST00000443081 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.66□□□□□ -0.388e-6■■■■■ 36.9
Retrieved 65 of 65 RNA–protein pairs in 31 ms