RNA–Protein interactions for RNA: ENST00000441639.5

EPB41L1-212, Transcript of erythrocyte membrane protein band 4.1 like 1, humanhuman

TSL 5 BASIC

Gene EPB41L1, Length 5,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41L1-212ENST00000441639 DCAF8L2P0C7V8 631 aa21.41■■□□□ 1.02
EPB41L1-212ENST00000441639 NISCHQ9Y2I1 1504 aa20.7■□□□□ 0.9
EPB41L1-212ENST00000441639 SUPT5HO00267 1087 aaKnown RBP20.54■□□□□ 0.88
EPB41L1-212ENST00000441639 SHROOM4Q9ULL8 1493 aa20.18■□□□□ 0.82
EPB41L1-212ENST00000441639 EHMT2Q96KQ7 1210 aa19.81■□□□□ 0.76
EPB41L1-212ENST00000441639 APLP2Q06481 763 aa19.38■□□□□ 0.69
EPB41L1-212ENST00000441639 FAM9AQ8IZU1 332 aaPredicted RBP19.36■□□□□ 0.69
EPB41L1-212ENST00000441639 PELP1Q8IZL8 1130 aaKnown RBP19.33■□□□□ 0.69
EPB41L1-212ENST00000441639 PCGF6Q9BYE7 350 aa19.29■□□□□ 0.68
EPB41L1-212ENST00000441639 TTBK1Q5TCY1 1321 aaPredicted RBP19.16■□□□□ 0.66
EPB41L1-212ENST00000441639 TRIM41Q8WV44 630 aa19.01■□□□□ 0.63
EPB41L1-212ENST00000441639 ZEB1P37275 1124 aaPredicted RBP18.94■□□□□ 0.62
EPB41L1-212ENST00000441639 RANGAP1P46060 587 aaPredicted RBP18.91■□□□□ 0.62
EPB41L1-212ENST00000441639 CCER1Q8TC90 406 aaPredicted RBP18.87■□□□□ 0.61
EPB41L1-212ENST00000441639 CENPBP07199 599 aaPredicted RBP18.84■□□□□ 0.61
EPB41L1-212ENST00000441639 UBTFP17480 764 aaKnown RBP18.74■□□□□ 0.59
EPB41L1-212ENST00000441639 ATP1B4Q9UN42 357 aaPredicted RBP18.69■□□□□ 0.58
EPB41L1-212ENST00000441639 PPARGC1BQ86YN6 1023 aaKnown RBP18.54■□□□□ 0.56
EPB41L1-212ENST00000441639 ERICH6Q7L0X2 663 aa18.53■□□□□ 0.56
EPB41L1-212ENST00000441639 TRIM26Q12899 539 aaPredicted RBP18.48■□□□□ 0.55
EPB41L1-212ENST00000441639 YTHDC1Q96MU7 727 aaKnown RBP18.47■□□□□ 0.55
EPB41L1-212ENST00000441639 NEFLP07196 543 aa18.37■□□□□ 0.53
EPB41L1-212ENST00000441639 HRCP23327 699 aa18.36■□□□□ 0.53
EPB41L1-212ENST00000441639 CHIC1Q5VXU3 224 aa18.33■□□□□ 0.53
EPB41L1-212ENST00000441639 LOC105371045A0A1W2PR82 267 aa18.33■□□□□ 0.52
EPB41L1-212ENST00000441639 ITGAEP38570 1179 aa18.16■□□□□ 0.5
EPB41L1-212ENST00000441639 HNRNPUL2Q1KMD3 747 aaKnown RBP18.1■□□□□ 0.49
EPB41L1-212ENST00000441639 MYT1Q01538 1121 aa18.07■□□□□ 0.48
EPB41L1-212ENST00000441639 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.99■□□□□ 0.47
EPB41L1-212ENST00000441639 POLR3GLQ9BT43 218 aa17.95■□□□□ 0.46
EPB41L1-212ENST00000441639 MYT1LQ9UL68 1186 aa17.85■□□□□ 0.45
EPB41L1-212ENST00000441639 DIEXFQ68CQ4 756 aaKnown RBP17.84■□□□□ 0.45
EPB41L1-212ENST00000441639 CNGB1Q14028 1251 aaPredicted RBP17.8■□□□□ 0.44
EPB41L1-212ENST00000441639 DAXXQ9UER7 740 aaPredicted RBP17.76■□□□□ 0.43
EPB41L1-212ENST00000441639 FAM50AQ14320 339 aaKnown RBP17.7■□□□□ 0.42
EPB41L1-212ENST00000441639 ABCC9O60706 1549 aa17.68■□□□□ 0.42
EPB41L1-212ENST00000441639 PABPN1Q86U42 306 aaKnown RBP eCLIP17.68■□□□□ 0.42
EPB41L1-212ENST00000441639 NEUROD1Q13562 356 aa17.58■□□□□ 0.4
EPB41L1-212ENST00000441639 TRIM52Q96A61 297 aa17.57■□□□□ 0.4
EPB41L1-212ENST00000441639 SLC4A1APQ9BWU0 796 aaKnown RBP17.53■□□□□ 0.4
EPB41L1-212ENST00000441639 GTF3C3Q9Y5Q9 886 aa17.49■□□□□ 0.39
EPB41L1-212ENST00000441639 ZNF316A6NFI3 1004 aaPredicted RBP17.44■□□□□ 0.38
EPB41L1-212ENST00000441639 BCANQ96GW7 911 aa17.42■□□□□ 0.38
EPB41L1-212ENST00000441639 CLSPNQ9HAW4 1339 aa17.42■□□□□ 0.38
EPB41L1-212ENST00000441639 ANP32CO43423 234 aa17.41■□□□□ 0.38
EPB41L1-212ENST00000441639 RTL5Q5HYW3 569 aaPredicted RBP17.41■□□□□ 0.38
EPB41L1-212ENST00000441639 CSRNP3Q8WYN3 585 aa17.38■□□□□ 0.37
EPB41L1-212ENST00000441639 ZNF326Q5BKZ1 582 aaKnown RBP17.36■□□□□ 0.37
EPB41L1-212ENST00000441639 P3H3Q8IVL6 736 aa17.28■□□□□ 0.36
EPB41L1-212ENST00000441639 ACIN1Q9UKV3 1341 aaKnown RBP17.26■□□□□ 0.35
EPB41L1-212ENST00000441639 CDK11AQ9UQ88 783 aaPredicted RBP17.25■□□□□ 0.35
EPB41L1-212ENST00000441639 FBLN2P98095 1184 aa17.25■□□□□ 0.35
EPB41L1-212ENST00000441639 ARID3CA6NKF2 412 aa17.18■□□□□ 0.34
EPB41L1-212ENST00000441639 ZCCHC6Q5VYS8 1495 aaKnown RBP17.15■□□□□ 0.34
EPB41L1-212ENST00000441639 DCAF1Q9Y4B6 1507 aa17.14■□□□□ 0.33
EPB41L1-212ENST00000441639 SCRIBQ14160 1630 aa17.13■□□□□ 0.33
EPB41L1-212ENST00000441639 ZNF777Q9ULD5 760 aaPredicted RBP17.07■□□□□ 0.32
EPB41L1-212ENST00000441639 CANXP27824 592 aaKnown RBP17.04■□□□□ 0.32
EPB41L1-212ENST00000441639 ZBTB47Q9UFB7 747 aaPredicted RBP17.03■□□□□ 0.32
EPB41L1-212ENST00000441639 TONSLQ96HA7 1378 aa17■□□□□ 0.31
EPB41L1-212ENST00000441639 FKBP8Q14318 412 aa16.96■□□□□ 0.31
EPB41L1-212ENST00000441639 DDX10Q13206 875 aaKnown RBP16.95■□□□□ 0.3
EPB41L1-212ENST00000441639 ANP32AP39687 249 aaKnown RBP16.94■□□□□ 0.3
EPB41L1-212ENST00000441639 NEFMP07197 916 aa16.93■□□□□ 0.3
EPB41L1-212ENST00000441639 BCL11AQ9H165 835 aa16.92■□□□□ 0.3
EPB41L1-212ENST00000441639 HNRNPUQ00839 825 aaKnown RBP eCLIP16.9■□□□□ 0.36e-7■■■■□ 21.7
EPB41L1-212ENST00000441639 SLC24A1O60721 1099 aa16.88■□□□□ 0.29
EPB41L1-212ENST00000441639 CCDC180Q9P1Z9 1646 aa16.87■□□□□ 0.29
EPB41L1-212ENST00000441639 NPM2Q86SE8 214 aaKnown RBP16.87■□□□□ 0.29
EPB41L1-212ENST00000441639 FAM9BQ8IZU0 186 aa16.86■□□□□ 0.29
EPB41L1-212ENST00000441639 CHIC2Q9UKJ5 165 aa16.84■□□□□ 0.29
EPB41L1-212ENST00000441639 MYO15BQ96JP2 1530 aa16.79■□□□□ 0.28
EPB41L1-212ENST00000441639 CLIP1P30622 1438 aa16.78■□□□□ 0.28
EPB41L1-212ENST00000441639 CHGAP10645 457 aaKnown RBP16.77■□□□□ 0.27
EPB41L1-212ENST00000441639 MIER1Q8N108 512 aa16.77■□□□□ 0.27
EPB41L1-212ENST00000441639 SALL2Q9Y467 1007 aaPredicted RBP16.75■□□□□ 0.27
EPB41L1-212ENST00000441639 TMC1Q8TDI8 760 aa16.73■□□□□ 0.27
EPB41L1-212ENST00000441639 MTUS2Q5JR59 1369 aa16.73■□□□□ 0.27
EPB41L1-212ENST00000441639 SCAF1Q9H7N4 1312 aaKnown RBP16.71■□□□□ 0.27
EPB41L1-212ENST00000441639 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.7■□□□□ 0.265e-7■■□□□ 12.1
EPB41L1-212ENST00000441639 MRS2Q9HD23 443 aa16.69■□□□□ 0.26
EPB41L1-212ENST00000441639 RSF1Q96T23 1441 aaPredicted RBP16.69■□□□□ 0.26
EPB41L1-212ENST00000441639 HIRIP3Q9BW71 556 aaPredicted RBP16.69■□□□□ 0.26
EPB41L1-212ENST00000441639 CCDC136Q96JN2 1154 aa16.68■□□□□ 0.26
EPB41L1-212ENST00000441639 CEP162Q5TB80 1403 aa16.66■□□□□ 0.26
EPB41L1-212ENST00000441639 KDM2AQ9Y2K7 1162 aa16.66■□□□□ 0.26
EPB41L1-212ENST00000441639 TSPY4P0CV99 314 aa16.66■□□□□ 0.26
EPB41L1-212ENST00000441639 TSPY10P0CW01 314 aa16.66■□□□□ 0.26
EPB41L1-212ENST00000441639 ESF1Q9H501 851 aaKnown RBP16.66■□□□□ 0.26
EPB41L1-212ENST00000441639 STAG3Q9UJ98 1225 aa16.66■□□□□ 0.26
EPB41L1-212ENST00000441639 EEA1Q15075 1411 aa16.65■□□□□ 0.26
EPB41L1-212ENST00000441639 GOLGA3Q08378 1498 aa16.65■□□□□ 0.26
EPB41L1-212ENST00000441639 UPF2Q9HAU5 1272 aaKnown RBP16.63■□□□□ 0.25
EPB41L1-212ENST00000441639 NPM1P06748 294 aaKnown RBP eCLIP16.61■□□□□ 0.25
EPB41L1-212ENST00000441639 HSP90AA1P07900 732 aaKnown RBP16.61■□□□□ 0.25
EPB41L1-212ENST00000441639 EIF4G2P78344 907 aaKnown RBP eCLIP16.61■□□□□ 0.259e-10■■■■■ 41.2
EPB41L1-212ENST00000441639 RRP7BPQ9NSQ0 103 aa16.61■□□□□ 0.25
EPB41L1-212ENST00000441639 WDR43Q15061 677 aaKnown RBP eCLIP16.6■□□□□ 0.25
EPB41L1-212ENST00000441639 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.6■□□□□ 0.25
EPB41L1-212ENST00000441639 IRX6P78412 446 aaPredicted RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms