RNA–Protein interactions for RNA: ENST00000441476.6

PMS2-206, Transcript of PMS1 homolog 2, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS2, Length 2,730 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2-206ENST00000441476 NISCHQ9Y2I1 1504 aa23.87■■□□□ 1.41
PMS2-206ENST00000441476 CCDC180Q9P1Z9 1646 aa20.37■□□□□ 0.85
PMS2-206ENST00000441476 SHROOM4Q9ULL8 1493 aa20.32■□□□□ 0.84
PMS2-206ENST00000441476 ZCCHC6Q5VYS8 1495 aaKnown RBP20.15■□□□□ 0.82
PMS2-206ENST00000441476 DCAF8L2P0C7V8 631 aa19.92■□□□□ 0.78
PMS2-206ENST00000441476 SUPT5HO00267 1087 aaKnown RBP19.76■□□□□ 0.75
PMS2-206ENST00000441476 DCAF1Q9Y4B6 1507 aa19.5■□□□□ 0.71
PMS2-206ENST00000441476 SCRIBQ14160 1630 aa19.17■□□□□ 0.66
PMS2-206ENST00000441476 ABCC9O60706 1549 aa19.16■□□□□ 0.66
PMS2-206ENST00000441476 CHIC1Q5VXU3 224 aa19.06■□□□□ 0.64
PMS2-206ENST00000441476 MYO15BQ96JP2 1530 aa19.04■□□□□ 0.64
PMS2-206ENST00000441476 NACADO15069 1562 aa18.87■□□□□ 0.61
PMS2-206ENST00000441476 RSF1Q96T23 1441 aaPredicted RBP18.81■□□□□ 0.6
PMS2-206ENST00000441476 CECR2Q9BXF3 1484 aa18.71■□□□□ 0.59
PMS2-206ENST00000441476 RB1CC1Q8TDY2 1594 aa18.66■□□□□ 0.58
PMS2-206ENST00000441476 MROH2BQ7Z745 1585 aa18.6■□□□□ 0.57
PMS2-206ENST00000441476 LOC105371045A0A1W2PR82 267 aa18.55■□□□□ 0.56
PMS2-206ENST00000441476 WIZO95785 1651 aa18.52■□□□□ 0.56
PMS2-206ENST00000441476 UNC13AQ9UPW8 1703 aa18.47■□□□□ 0.55
PMS2-206ENST00000441476 TRIM41Q8WV44 630 aa18.35■□□□□ 0.53
PMS2-206ENST00000441476 BAZ1AQ9NRL2 1556 aaPredicted RBP18.32■□□□□ 0.52
PMS2-206ENST00000441476 FAM9AQ8IZU1 332 aaPredicted RBP18.3■□□□□ 0.52
PMS2-206ENST00000441476 PABPN1Q86U42 306 aaKnown RBP eCLIP18.29■□□□□ 0.52
PMS2-206ENST00000441476 PCGF6Q9BYE7 350 aa18.27■□□□□ 0.51
PMS2-206ENST00000441476 SMARCA4P51532 1647 aa18.25■□□□□ 0.51
PMS2-206ENST00000441476 EHMT2Q96KQ7 1210 aa18.23■□□□□ 0.51
PMS2-206ENST00000441476 BICRAQ9NZM4 1560 aa18.2■□□□□ 0.5
PMS2-206ENST00000441476 TOP2AP11388 1531 aaKnown RBP18.15■□□□□ 0.5
PMS2-206ENST00000441476 EIF4G1Q04637 1599 aaKnown RBP18.15■□□□□ 0.5
PMS2-206ENST00000441476 CCDC88BA6NC98 1476 aa18.09■□□□□ 0.49
PMS2-206ENST00000441476 SMARCA2P51531 1590 aa18.08■□□□□ 0.48
PMS2-206ENST00000441476 HRCP23327 699 aa18.06■□□□□ 0.48
PMS2-206ENST00000441476 ABCC8Q09428 1581 aa18.04■□□□□ 0.48
PMS2-206ENST00000441476 TRIM26Q12899 539 aaPredicted RBP17.88■□□□□ 0.45
PMS2-206ENST00000441476 PPARGC1BQ86YN6 1023 aaKnown RBP17.87■□□□□ 0.45
PMS2-206ENST00000441476 PEG3Q9GZU2 1588 aa17.85■□□□□ 0.45
PMS2-206ENST00000441476 ATAD2BQ9ULI0 1458 aa17.82■□□□□ 0.44
PMS2-206ENST00000441476 SOGA1O94964 1423 aa17.79■□□□□ 0.44
PMS2-206ENST00000441476 BAZ1BQ9UIG0 1483 aaKnown RBP17.76■□□□□ 0.43
PMS2-206ENST00000441476 RUSC2Q8N2Y8 1516 aa17.75■□□□□ 0.43
PMS2-206ENST00000441476 WRNQ14191 1432 aaPredicted RBP eCLIP17.67■□□□□ 0.42
PMS2-206ENST00000441476 SYNJ1O43426 1573 aa17.67■□□□□ 0.42
PMS2-206ENST00000441476 CSRNP3Q8WYN3 585 aa17.58■□□□□ 0.41
PMS2-206ENST00000441476 TTBK1Q5TCY1 1321 aaPredicted RBP17.57■□□□□ 0.4
PMS2-206ENST00000441476 CEP162Q5TB80 1403 aa17.56■□□□□ 0.4
PMS2-206ENST00000441476 UBTFP17480 764 aaKnown RBP17.53■□□□□ 0.4
PMS2-206ENST00000441476 EEA1Q15075 1411 aa17.51■□□□□ 0.39
PMS2-206ENST00000441476 TNIKQ9UKE5 1360 aa17.5■□□□□ 0.39
PMS2-206ENST00000441476 NCAPD3P42695 1498 aa17.46■□□□□ 0.39
PMS2-206ENST00000441476 GOLGA3Q08378 1498 aa17.46■□□□□ 0.39
PMS2-206ENST00000441476 HMGXB3Q12766 1538 aa17.45■□□□□ 0.38
PMS2-206ENST00000441476 TOP2BQ02880 1626 aa17.4■□□□□ 0.38
PMS2-206ENST00000441476 KIF21BO75037 1637 aa17.37■□□□□ 0.37
PMS2-206ENST00000441476 CEP164Q9UPV0 1460 aa17.37■□□□□ 0.37
PMS2-206ENST00000441476 RAPGEF2Q9Y4G8 1499 aa17.36■□□□□ 0.37
PMS2-206ENST00000441476 RANGAP1P46060 587 aaPredicted RBP17.36■□□□□ 0.37
PMS2-206ENST00000441476 BIVM-ERCC5R4GMW8 1640 aa17.35■□□□□ 0.37
PMS2-206ENST00000441476 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.33■□□□□ 0.36
PMS2-206ENST00000441476 CUX1P39880 1505 aa17.33■□□□□ 0.36
PMS2-206ENST00000441476 ZEB1P37275 1124 aaPredicted RBP17.3■□□□□ 0.36
PMS2-206ENST00000441476 CFTRP13569 1480 aa17.28■□□□□ 0.36
PMS2-206ENST00000441476 CLIP1P30622 1438 aa17.27■□□□□ 0.36
PMS2-206ENST00000441476 CC2D2AQ9P2K1 1620 aa17.23■□□□□ 0.35
PMS2-206ENST00000441476 CCER1Q8TC90 406 aaPredicted RBP17.2■□□□□ 0.34
PMS2-206ENST00000441476 PRDM2Q13029 1718 aa17.17■□□□□ 0.34
PMS2-206ENST00000441476 PRXQ9BXM0 1461 aa17.16■□□□□ 0.34
PMS2-206ENST00000441476 VPS8Q8N3P4 1428 aa17.15■□□□□ 0.34
PMS2-206ENST00000441476 CADPSQ9ULU8 1353 aa17.13■□□□□ 0.33
PMS2-206ENST00000441476 KIF27Q86VH2 1401 aa17.11■□□□□ 0.33
PMS2-206ENST00000441476 ERICH3Q5RHP9 1530 aa17.1■□□□□ 0.33
PMS2-206ENST00000441476 ARAP1Q96P48 1450 aa17.07■□□□□ 0.32
PMS2-206ENST00000441476 CUX2O14529 1486 aa17.06■□□□□ 0.32
PMS2-206ENST00000441476 HNRNPUL2Q1KMD3 747 aaKnown RBP17.06■□□□□ 0.32
PMS2-206ENST00000441476 FGD5Q6ZNL6 1462 aa17.04■□□□□ 0.32
PMS2-206ENST00000441476 NESP48681 1621 aa17.03■□□□□ 0.32
PMS2-206ENST00000441476 APLP2Q06481 763 aa17.02■□□□□ 0.31
PMS2-206ENST00000441476 FANCD2Q9BXW9 1451 aa17■□□□□ 0.31
PMS2-206ENST00000441476 IGF1RP08069 1367 aa16.97■□□□□ 0.31
PMS2-206ENST00000441476 DNAJC5BQ9UF47 199 aa16.97■□□□□ 0.31
PMS2-206ENST00000441476 KANK4Q5T7N3 995 aaPredicted RBP16.95■□□□□ 0.3
PMS2-206ENST00000441476 ARHGAP35Q9NRY4 1499 aa16.94■□□□□ 0.3
PMS2-206ENST00000441476 RAD54L2Q9Y4B4 1467 aa16.93■□□□□ 0.3
PMS2-206ENST00000441476 CARMIL1Q5VZK9 1371 aa16.89■□□□□ 0.3
PMS2-206ENST00000441476 TOPBP1Q92547 1522 aa16.88■□□□□ 0.29
PMS2-206ENST00000441476 DNMBPQ6XZF7 1577 aa16.87■□□□□ 0.29
PMS2-206ENST00000441476 POLA1P09884 1462 aaPredicted RBP16.86■□□□□ 0.29
PMS2-206ENST00000441476 P3H3Q8IVL6 736 aa16.81■□□□□ 0.28
PMS2-206ENST00000441476 URB2Q14146 1524 aaKnown RBP16.8■□□□□ 0.28
PMS2-206ENST00000441476 ABCA10Q8WWZ4 1543 aa16.79■□□□□ 0.28
PMS2-206ENST00000441476 LAMC3Q9Y6N6 1575 aa16.76■□□□□ 0.27
PMS2-206ENST00000441476 KIF21AQ7Z4S6 1674 aa16.73■□□□□ 0.27
PMS2-206ENST00000441476 ITGAEP38570 1179 aa16.72■□□□□ 0.27
PMS2-206ENST00000441476 DIEXFQ68CQ4 756 aaKnown RBP16.72■□□□□ 0.27
PMS2-206ENST00000441476 TDRD9Q8NDG6 1382 aaKnown RBP16.71■□□□□ 0.27
PMS2-206ENST00000441476 WDR97A6NE52 1622 aa16.71■□□□□ 0.27
PMS2-206ENST00000441476 FHOD3Q2V2M9 1422 aa16.7■□□□□ 0.26
PMS2-206ENST00000441476 RRBP1Q9P2E9 1410 aaKnown RBP16.7■□□□□ 0.26
PMS2-206ENST00000441476 TIAM1Q13009 1591 aa16.7■□□□□ 0.26
PMS2-206ENST00000441476 PCF11O94913 1555 aaKnown RBP16.69■□□□□ 0.26
PMS2-206ENST00000441476 ATP1B4Q9UN42 357 aaPredicted RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 135.5 ms