RNA–Protein interactions for RNA: ENST00000441368.5

SEC61A2-209, Transcript of Sec61 translocon alpha 2 subunit, humanhuman

TSL 5

Gene SEC61A2, Length 691 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2-209ENST00000441368 NISCHQ9Y2I1 1504 aa45.17■■■■■ 4.82
SEC61A2-209ENST00000441368 CCDC180Q9P1Z9 1646 aa40.43■■■■■ 4.06
SEC61A2-209ENST00000441368 ABCC9O60706 1549 aa40.12■■■■■ 4.01
SEC61A2-209ENST00000441368 RB1CC1Q8TDY2 1594 aa38.33■■■■□ 3.73
SEC61A2-209ENST00000441368 DCAF8L2P0C7V8 631 aa38.15■■■■□ 3.7
SEC61A2-209ENST00000441368 NACADO15069 1562 aa38.1■■■■□ 3.69
SEC61A2-209ENST00000441368 MYO15BQ96JP2 1530 aa37.59■■■■□ 3.61
SEC61A2-209ENST00000441368 ZCCHC6Q5VYS8 1495 aaKnown RBP37.52■■■■□ 3.6
SEC61A2-209ENST00000441368 UNC13AQ9UPW8 1703 aa37.49■■■■□ 3.59
SEC61A2-209ENST00000441368 PABPN1Q86U42 306 aaKnown RBP eCLIP37.39■■■■□ 3.58
SEC61A2-209ENST00000441368 DCAF1Q9Y4B6 1507 aa37.27■■■■□ 3.56
SEC61A2-209ENST00000441368 DNAJC5BQ9UF47 199 aa37.15■■■■□ 3.54
SEC61A2-209ENST00000441368 BICRAQ9NZM4 1560 aa37.11■■■■□ 3.53
SEC61A2-209ENST00000441368 SCRIBQ14160 1630 aa36.96■■■■□ 3.51
SEC61A2-209ENST00000441368 SHROOM4Q9ULL8 1493 aa36.63■■■■□ 3.45
SEC61A2-209ENST00000441368 EIF4G1Q04637 1599 aaKnown RBP36.23■■■■□ 3.39
SEC61A2-209ENST00000441368 CC2D2AQ9P2K1 1620 aa36.23■■■■□ 3.39
SEC61A2-209ENST00000441368 CECR2Q9BXF3 1484 aa36.07■■■■□ 3.37
SEC61A2-209ENST00000441368 SMARCA4P51532 1647 aa35.21■■■■□ 3.23
SEC61A2-209ENST00000441368 NCAPD3P42695 1498 aa35.1■■■■□ 3.21
SEC61A2-209ENST00000441368 ATAD2BQ9ULI0 1458 aa35.09■■■■□ 3.21
SEC61A2-209ENST00000441368 BAZ1AQ9NRL2 1556 aaPredicted RBP35.08■■■■□ 3.21
SEC61A2-209ENST00000441368 SMARCA2P51531 1590 aa35.08■■■■□ 3.21
SEC61A2-209ENST00000441368 HMGXB3Q12766 1538 aa34.94■■■■□ 3.18
SEC61A2-209ENST00000441368 BAZ1BQ9UIG0 1483 aaKnown RBP34.86■■■■□ 3.17
SEC61A2-209ENST00000441368 MROH2BQ7Z745 1585 aa34.83■■■■□ 3.17
SEC61A2-209ENST00000441368 PEG3Q9GZU2 1588 aa34.78■■■■□ 3.16
SEC61A2-209ENST00000441368 ERCC6Q03468 1493 aa34.67■■■■□ 3.14
SEC61A2-209ENST00000441368 NESP48681 1621 aa34.53■■■■□ 3.12
SEC61A2-209ENST00000441368 WIZO95785 1651 aa34.5■■■■□ 3.11
SEC61A2-209ENST00000441368 CUX2O14529 1486 aa34.36■■■■□ 3.09
SEC61A2-209ENST00000441368 LAMC3Q9Y6N6 1575 aa34.35■■■■□ 3.09
SEC61A2-209ENST00000441368 RSF1Q96T23 1441 aaPredicted RBP34.21■■■■□ 3.07
SEC61A2-209ENST00000441368 KIF21AQ7Z4S6 1674 aa34.17■■■■□ 3.06
SEC61A2-209ENST00000441368 PDS5BQ9NTI5 1447 aa34.13■■■■□ 3.05
SEC61A2-209ENST00000441368 THOC2Q8NI27 1593 aaKnown RBP34.11■■■■□ 3.05
SEC61A2-209ENST00000441368 CADPSQ9ULU8 1353 aa34.1■■■■□ 3.05
SEC61A2-209ENST00000441368 TOP2AP11388 1531 aaKnown RBP34.06■■■■□ 3.04
SEC61A2-209ENST00000441368 DNAJC5Q9H3Z4 198 aa33.86■■■■□ 3.01
SEC61A2-209ENST00000441368 MRC2Q9UBG0 1479 aa33.83■■■■□ 3.01
SEC61A2-209ENST00000441368 CEP164Q9UPV0 1460 aa33.81■■■■□ 3
SEC61A2-209ENST00000441368 CFTRP13569 1480 aa33.77■■■■□ 3
SEC61A2-209ENST00000441368 FANCD2Q9BXW9 1451 aa33.77■■■■□ 3
SEC61A2-209ENST00000441368 WDR62O43379 1518 aa33.71■■■□□ 2.99
SEC61A2-209ENST00000441368 CCDC88BA6NC98 1476 aa33.63■■■□□ 2.97
SEC61A2-209ENST00000441368 PRDM2Q13029 1718 aa33.61■■■□□ 2.97
SEC61A2-209ENST00000441368 URB2Q14146 1524 aaKnown RBP33.44■■■□□ 2.94
SEC61A2-209ENST00000441368 TOPBP1Q92547 1522 aa33.16■■■□□ 2.9
SEC61A2-209ENST00000441368 SUPT5HO00267 1087 aaKnown RBP33.14■■■□□ 2.9
SEC61A2-209ENST00000441368 ABCC8Q09428 1581 aa33.1■■■□□ 2.89
SEC61A2-209ENST00000441368 DNMBPQ6XZF7 1577 aa33.09■■■□□ 2.89
SEC61A2-209ENST00000441368 IFT140Q96RY7 1462 aa33.07■■■□□ 2.88
SEC61A2-209ENST00000441368 ZNF608Q9ULD9 1512 aaPredicted RBP32.97■■■□□ 2.87
SEC61A2-209ENST00000441368 EIF4G3O43432 1585 aaKnown RBP32.88■■■□□ 2.85
SEC61A2-209ENST00000441368 OSCARQ8IYS5 282 aa32.86■■■□□ 2.85
SEC61A2-209ENST00000441368 POLA1P09884 1462 aaPredicted RBP32.84■■■□□ 2.85
SEC61A2-209ENST00000441368 TARBP1Q13395 1621 aaKnown RBP32.82■■■□□ 2.84
SEC61A2-209ENST00000441368 TRIM41Q8WV44 630 aa32.74■■■□□ 2.83
SEC61A2-209ENST00000441368 RAD54L2Q9Y4B4 1467 aa32.74■■■□□ 2.83
SEC61A2-209ENST00000441368 AQRO60306 1485 aaKnown RBP eCLIP32.73■■■□□ 2.83
SEC61A2-209ENST00000441368 FGD5Q6ZNL6 1462 aa32.72■■■□□ 2.83
SEC61A2-209ENST00000441368 CUX1P39880 1505 aa32.72■■■□□ 2.83
SEC61A2-209ENST00000441368 SOGA1O94964 1423 aa32.7■■■□□ 2.83
SEC61A2-209ENST00000441368 CHD1O14646 1710 aa32.6■■■□□ 2.81
SEC61A2-209ENST00000441368 TDRD9Q8NDG6 1382 aaKnown RBP32.6■■■□□ 2.81
SEC61A2-209ENST00000441368 FBLN2P98095 1184 aa32.56■■■□□ 2.8
SEC61A2-209ENST00000441368 WDR97A6NE52 1622 aa32.51■■■□□ 2.8
SEC61A2-209ENST00000441368 SNAPC4Q5SXM2 1469 aa32.46■■■□□ 2.79
SEC61A2-209ENST00000441368 RIMBP3CA6NJZ7 1639 aa32.45■■■□□ 2.79
SEC61A2-209ENST00000441368 RIMBP3BA6NNM3 1639 aa32.45■■■□□ 2.79
SEC61A2-209ENST00000441368 RIMBP3Q9UFD9 1639 aa32.45■■■□□ 2.79
SEC61A2-209ENST00000441368 GRIN2BQ13224 1484 aa32.38■■■□□ 2.77
SEC61A2-209ENST00000441368 PBRM1Q86U86 1689 aa32.37■■■□□ 2.77
SEC61A2-209ENST00000441368 ARHGEF11O15085 1522 aa32.36■■■□□ 2.77
SEC61A2-209ENST00000441368 MAGI1Q96QZ7 1491 aaPredicted RBP32.34■■■□□ 2.77
SEC61A2-209ENST00000441368 WRNQ14191 1432 aaPredicted RBP eCLIP32.34■■■□□ 2.77
SEC61A2-209ENST00000441368 GAPVD1Q14C86 1478 aa32.33■■■□□ 2.77
SEC61A2-209ENST00000441368 CHMP7Q8WUX9 453 aaPredicted RBP32.32■■■□□ 2.76
SEC61A2-209ENST00000441368 BIVM-ERCC5R4GMW8 1640 aa32.32■■■□□ 2.76
SEC61A2-209ENST00000441368 ABCA10Q8WWZ4 1543 aa32.31■■■□□ 2.76
SEC61A2-209ENST00000441368 TOP2BQ02880 1626 aa32.3■■■□□ 2.76
SEC61A2-209ENST00000441368 SYNJ1O43426 1573 aa32.3■■■□□ 2.76
SEC61A2-209ENST00000441368 ABCA5Q8WWZ7 1642 aa32.27■■■□□ 2.76
SEC61A2-209ENST00000441368 SYNJ2O15056 1496 aa32.23■■■□□ 2.75
SEC61A2-209ENST00000441368 CLASP1Q7Z460 1538 aa32.12■■■□□ 2.73
SEC61A2-209ENST00000441368 CYB5RLQ6IPT4 315 aa32.12■■■□□ 2.73
SEC61A2-209ENST00000441368 ARAP1Q96P48 1450 aa32.05■■■□□ 2.72
SEC61A2-209ENST00000441368 ADAMTS12P58397 1594 aa32.03■■■□□ 2.72
SEC61A2-209ENST00000441368 GRIN2AQ12879 1464 aa31.97■■■□□ 2.71
SEC61A2-209ENST00000441368 ERICH3Q5RHP9 1530 aa31.94■■■□□ 2.7
SEC61A2-209ENST00000441368 FHAD1B1AJZ9 1412 aa31.92■■■□□ 2.7
SEC61A2-209ENST00000441368 CEP170Q5SW79 1584 aa31.85■■■□□ 2.69
SEC61A2-209ENST00000441368 NUP160Q12769 1436 aa31.79■■■□□ 2.68
SEC61A2-209ENST00000441368 TRHP20396 242 aaPredicted RBP31.74■■■□□ 2.67
SEC61A2-209ENST00000441368 KIF27Q86VH2 1401 aa31.7■■■□□ 2.67
SEC61A2-209ENST00000441368 ERCC6L2Q5T890 1561 aa31.68■■■□□ 2.66
SEC61A2-209ENST00000441368 SHROOM2Q13796 1616 aa31.64■■■□□ 2.65
SEC61A2-209ENST00000441368 CUL7Q14999 1698 aa31.61■■■□□ 2.65
SEC61A2-209ENST00000441368 RUSC2Q8N2Y8 1516 aa31.57■■■□□ 2.64
SEC61A2-209ENST00000441368 IGF1RP08069 1367 aa31.55■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms