RNA–Protein interactions for RNA: ENST00000440384.1

PTMA-207, Transcript of prothymosin alpha, humanhuman

TSL 3

Gene PTMA, Length 222 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTMA-207ENST00000440384 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.39■□□□□ 0.855e-7■■■■■ 177.2
PTMA-207ENST00000440384 SF3B1O75533 1304 aaKnown RBP eCLIP20.85■□□□□ 0.931e-7■■■■■ 172.3
PTMA-207ENST00000440384 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.3■□□□□ 0.522e-12■■■■■ 101.6
PTMA-207ENST00000440384 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.01■□□□□ 0.155e-17■■■■■ 63.2
PTMA-207ENST00000440384 FKBP4Q02790 459 aaKnown RBP eCLIP24.23■■□□□ 1.474e-12■■■■■ 39.4
PTMA-207ENST00000440384 NONOQ15233 471 aaKnown RBP eCLIP21.74■■□□□ 1.077e-11■■■■■ 34.5
PTMA-207ENST00000440384 SF3B4Q15427 424 aaKnown RBP eCLIP17.47■□□□□ 0.396e-7■■■■□ 26.7
PTMA-207ENST00000440384 LSM11P83369 360 aaKnown RBP eCLIP16.72■□□□□ 0.274e-8■■■■□ 24.9
PTMA-207ENST00000440384 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.88■□□□□ 0.772e-48■■■■□ 24.6
PTMA-207ENST00000440384 RBM5P52756 815 aaKnown RBP eCLIP23.57■■□□□ 1.361e-6■■■■□ 23.8
PTMA-207ENST00000440384 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.3■■□□□ 1.163e-6■■■■□ 23.5
PTMA-207ENST00000440384 NCBP2P52298 156 aaKnown RBP eCLIP17.7■□□□□ 0.429e-7■■■■□ 23.4
PTMA-207ENST00000440384 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.63■■□□□ 1.211e-7■■■■□ 22.7
PTMA-207ENST00000440384 EFTUD2Q15029 972 aaKnown RBP eCLIP18.32■□□□□ 0.521e-7■■■■□ 22.1
PTMA-207ENST00000440384 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.9■□□□□ 0.462e-7■■■■□ 20.8
PTMA-207ENST00000440384 SMNDC1O75940 238 aaKnown RBP eCLIP17.16■□□□□ 0.341e-6■■■■□ 19.3
PTMA-207ENST00000440384 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.54■■□□□ 1.045e-13■■■□□ 18.9
PTMA-207ENST00000440384 EWSR1Q01844 656 aaKnown RBP eCLIP14.13□□□□□ -0.158e-7■■■□□ 18.8
PTMA-207ENST00000440384 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.9■□□□□ 0.785e-6■■■□□ 17.4
PTMA-207ENST00000440384 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.15■■■□□ 2.265e-7■■■□□ 17.2
PTMA-207ENST00000440384 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.09■■□□□ 1.295e-6■■■□□ 17
PTMA-207ENST00000440384 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.52■□□□□ 0.884e-8■■■□□ 16.7
PTMA-207ENST00000440384 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.93■□□□□ 0.941e-8■■■□□ 16.1
PTMA-207ENST00000440384 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.9■□□□□ 0.625e-9■■■□□ 16
PTMA-207ENST00000440384 NKRFO15226 690 aaKnown RBP eCLIP22.01■■□□□ 1.113e-13■■□□□ 14.1
PTMA-207ENST00000440384 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29■■■□□ 2.234e-19■■□□□ 13.8
PTMA-207ENST00000440384 AQRO60306 1485 aaKnown RBP eCLIP33.03■■■□□ 2.881e-27■■□□□ 12.9
PTMA-207ENST00000440384 FUSP35637 526 aaKnown RBP eCLIP12.64□□□□□ -0.399e-7■■□□□ 11.4
PTMA-207ENST00000440384 METAP2P50579 478 aaKnown RBP eCLIP22.11■■□□□ 1.133e-6■□□□□ 10.1
PTMA-207ENST00000440384 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.9■□□□□ 0.783e-7■□□□□ 10.1
PTMA-207ENST00000440384 DDX6P26196 483 aaKnown RBP eCLIP20.33■□□□□ 0.853e-6■□□□□ 10
PTMA-207ENST00000440384 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.32■■■□□ 2.445e-12■□□□□ 9.5
PTMA-207ENST00000440384 SFPQP23246 707 aaKnown RBP eCLIP21.29■■□□□ 11e-7■□□□□ 9.2
PTMA-207ENST00000440384 TRA2AQ13595 282 aaKnown RBP eCLIP18.74■□□□□ 0.593e-6■□□□□ 8.6
PTMA-207ENST00000440384 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.39■□□□□ 0.854e-7■□□□□ 8.6
Retrieved 35 of 35 RNA–protein pairs in 29.8 ms