RNA–Protein interactions for RNA: ENST00000439976.5

LAMB1-205, Transcript of laminin subunit beta 1, human

TSL 5

Gene LAMB1, Length 703 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LAMB1-205	ENST00000439976	NISCH	Q9Y2I1	1504 aa		41.35	■■■■■ 4.21
LAMB1-205	ENST00000439976	ABCC9	O60706	1549 aa		37.46	■■■■□ 3.59
LAMB1-205	ENST00000439976	CCDC180	Q9P1Z9	1646 aa		37.2	■■■■□ 3.55
LAMB1-205	ENST00000439976	RB1CC1	Q8TDY2	1594 aa		35.51	■■■■□ 3.27
LAMB1-205	ENST00000439976	DNAJC5B	Q9UF47	199 aa		35.46	■■■■□ 3.27
LAMB1-205	ENST00000439976	NACAD	O15069	1562 aa		35.23	■■■■□ 3.23
LAMB1-205	ENST00000439976	DCAF8L2	P0C7V8	631 aa		34.89	■■■■□ 3.18
LAMB1-205	ENST00000439976	PABPN1	Q86U42	306 aa	Known RBP eCLIP	34.83	■■■■□ 3.17
LAMB1-205	ENST00000439976	UNC13A	Q9UPW8	1703 aa		34.78	■■■■□ 3.16
LAMB1-205	ENST00000439976	MYO15B	Q96JP2	1530 aa		34.7	■■■■□ 3.14
LAMB1-205	ENST00000439976	BICRA	Q9NZM4	1560 aa		34.58	■■■■□ 3.13
LAMB1-205	ENST00000439976	ZCCHC6	Q5VYS8	1495 aa	Known RBP	34.23	■■■■□ 3.07
LAMB1-205	ENST00000439976	DCAF1	Q9Y4B6	1507 aa		34.14	■■■■□ 3.06
LAMB1-205	ENST00000439976	SHROOM4	Q9ULL8	1493 aa		34.02	■■■■□ 3.04
LAMB1-205	ENST00000439976	SCRIB	Q14160	1630 aa		33.87	■■■■□ 3.01
LAMB1-205	ENST00000439976	CC2D2A	Q9P2K1	1620 aa		33.84	■■■■□ 3.01
LAMB1-205	ENST00000439976	CECR2	Q9BXF3	1484 aa		33.77	■■■■□ 3
LAMB1-205	ENST00000439976	EIF4G1	Q04637	1599 aa	Known RBP	33.71	■■■□□ 2.99
LAMB1-205	ENST00000439976	DNAJC5	Q9H3Z4	198 aa		32.69	■■■□□ 2.82
LAMB1-205	ENST00000439976	NCAPD3	P42695	1498 aa		32.56	■■■□□ 2.8
LAMB1-205	ENST00000439976	ATAD2B	Q9ULI0	1458 aa		32.42	■■■□□ 2.78
LAMB1-205	ENST00000439976	CUX2	O14529	1486 aa		32.38	■■■□□ 2.77
LAMB1-205	ENST00000439976	SMARCA4	P51532	1647 aa		32.31	■■■□□ 2.76
LAMB1-205	ENST00000439976	ERCC6	Q03468	1493 aa		32.29	■■■□□ 2.76
LAMB1-205	ENST00000439976	HMGXB3	Q12766	1538 aa		32.27	■■■□□ 2.76
LAMB1-205	ENST00000439976	SMARCA2	P51531	1590 aa		32.27	■■■□□ 2.76
LAMB1-205	ENST00000439976	NES	P48681	1621 aa		32.14	■■■□□ 2.74
LAMB1-205	ENST00000439976	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	32.08	■■■□□ 2.73
LAMB1-205	ENST00000439976	BAZ1B	Q9UIG0	1483 aa	Known RBP	32.04	■■■□□ 2.72
LAMB1-205	ENST00000439976	PEG3	Q9GZU2	1588 aa		32.02	■■■□□ 2.72
LAMB1-205	ENST00000439976	MROH2B	Q7Z745	1585 aa		31.88	■■■□□ 2.69
LAMB1-205	ENST00000439976	THOC2	Q8NI27	1593 aa	Known RBP	31.87	■■■□□ 2.69
LAMB1-205	ENST00000439976	LAMC3	Q9Y6N6	1575 aa		31.82	■■■□□ 2.68
LAMB1-205	ENST00000439976	KIF21A	Q7Z4S6	1674 aa		31.69	■■■□□ 2.66
LAMB1-205	ENST00000439976	PDS5B	Q9NTI5	1447 aa		31.63	■■■□□ 2.65
LAMB1-205	ENST00000439976	CADPS	Q9ULU8	1353 aa		31.53	■■■□□ 2.64
LAMB1-205	ENST00000439976	WIZ	O95785	1651 aa		31.46	■■■□□ 2.63
LAMB1-205	ENST00000439976	MRC2	Q9UBG0	1479 aa		31.4	■■■□□ 2.62
LAMB1-205	ENST00000439976	WDR62	O43379	1518 aa		31.36	■■■□□ 2.61
LAMB1-205	ENST00000439976	CEP164	Q9UPV0	1460 aa		31.2	■■■□□ 2.58
LAMB1-205	ENST00000439976	FANCD2	Q9BXW9	1451 aa		31.17	■■■□□ 2.58
LAMB1-205	ENST00000439976	CFTR	P13569	1480 aa		31.14	■■■□□ 2.58
LAMB1-205	ENST00000439976	RSF1	Q96T23	1441 aa	Predicted RBP	31.12	■■■□□ 2.57
LAMB1-205	ENST00000439976	TRIM41	Q8WV44	630 aa		31.06	■■■□□ 2.56
LAMB1-205	ENST00000439976	TOP2A	P11388	1531 aa	Known RBP	31.03	■■■□□ 2.56
LAMB1-205	ENST00000439976	URB2	Q14146	1524 aa	Known RBP	30.97	■■■□□ 2.55
LAMB1-205	ENST00000439976	OSCAR	Q8IYS5	282 aa		30.83	■■■□□ 2.53
LAMB1-205	ENST00000439976	PRDM2	Q13029	1718 aa		30.77	■■■□□ 2.52
LAMB1-205	ENST00000439976	CCDC88B	A6NC98	1476 aa		30.7	■■■□□ 2.51
LAMB1-205	ENST00000439976	ZNF608	Q9ULD9	1512 aa	Predicted RBP	30.63	■■■□□ 2.49
LAMB1-205	ENST00000439976	IFT140	Q96RY7	1462 aa		30.6	■■■□□ 2.49
LAMB1-205	ENST00000439976	TOPBP1	Q92547	1522 aa		30.57	■■■□□ 2.48
LAMB1-205	ENST00000439976	RIMBP3C	A6NJZ7	1639 aa		30.51	■■■□□ 2.47
LAMB1-205	ENST00000439976	RIMBP3B	A6NNM3	1639 aa		30.51	■■■□□ 2.47
LAMB1-205	ENST00000439976	RIMBP3	Q9UFD9	1639 aa		30.51	■■■□□ 2.47
LAMB1-205	ENST00000439976	ABCC8	Q09428	1581 aa		30.42	■■■□□ 2.46
LAMB1-205	ENST00000439976	EIF4G3	O43432	1585 aa	Known RBP	30.41	■■■□□ 2.46
LAMB1-205	ENST00000439976	DNMBP	Q6XZF7	1577 aa		30.41	■■■□□ 2.46
LAMB1-205	ENST00000439976	ARHGEF11	O15085	1522 aa		30.38	■■■□□ 2.45
LAMB1-205	ENST00000439976	TARBP1	Q13395	1621 aa	Known RBP	30.33	■■■□□ 2.45
LAMB1-205	ENST00000439976	AQR	O60306	1485 aa	Known RBP eCLIP	30.29	■■■□□ 2.44	1e-10	■■■■■ 44
LAMB1-205	ENST00000439976	POLA1	P09884	1462 aa	Predicted RBP	30.25	■■■□□ 2.43
LAMB1-205	ENST00000439976	CHD1	O14646	1710 aa		30.24	■■■□□ 2.43
LAMB1-205	ENST00000439976	RAD54L2	Q9Y4B4	1467 aa		30.14	■■■□□ 2.42
LAMB1-205	ENST00000439976	CYB5RL	Q6IPT4	315 aa		30.13	■■■□□ 2.41
LAMB1-205	ENST00000439976	ARAP1	Q96P48	1450 aa		30.09	■■■□□ 2.41
LAMB1-205	ENST00000439976	FBLN2	P98095	1184 aa		30.06	■■■□□ 2.4
LAMB1-205	ENST00000439976	SOGA1	O94964	1423 aa		30.05	■■■□□ 2.4
LAMB1-205	ENST00000439976	TDRD9	Q8NDG6	1382 aa	Known RBP	30.05	■■■□□ 2.4
LAMB1-205	ENST00000439976	FGD5	Q6ZNL6	1462 aa		30	■■■□□ 2.39
LAMB1-205	ENST00000439976	SNAPC4	Q5SXM2	1469 aa		29.97	■■■□□ 2.39
LAMB1-205	ENST00000439976	CUX1	P39880	1505 aa		29.96	■■■□□ 2.39
LAMB1-205	ENST00000439976	WDR97	A6NE52	1622 aa		29.96	■■■□□ 2.39
LAMB1-205	ENST00000439976	CLASP1	Q7Z460	1538 aa		29.92	■■■□□ 2.38
LAMB1-205	ENST00000439976	MAGI1	Q96QZ7	1491 aa	Predicted RBP	29.87	■■■□□ 2.37
LAMB1-205	ENST00000439976	GRIN2B	Q13224	1484 aa		29.83	■■■□□ 2.37
LAMB1-205	ENST00000439976	TRH	P20396	242 aa	Predicted RBP	29.82	■■■□□ 2.36
LAMB1-205	ENST00000439976	CHMP7	Q8WUX9	453 aa	Predicted RBP	29.81	■■■□□ 2.36
LAMB1-205	ENST00000439976	SYNJ1	O43426	1573 aa		29.81	■■■□□ 2.36
LAMB1-205	ENST00000439976	SYNJ2	O15056	1496 aa		29.78	■■■□□ 2.36
LAMB1-205	ENST00000439976	PBRM1	Q86U86	1689 aa		29.7	■■■□□ 2.35
LAMB1-205	ENST00000439976	GAPVD1	Q14C86	1478 aa		29.7	■■■□□ 2.35
LAMB1-205	ENST00000439976	ABCA10	Q8WWZ4	1543 aa		29.66	■■■□□ 2.34
LAMB1-205	ENST00000439976	ABCA5	Q8WWZ7	1642 aa		29.65	■■■□□ 2.34
LAMB1-205	ENST00000439976	GRIN2A	Q12879	1464 aa		29.47	■■■□□ 2.31
LAMB1-205	ENST00000439976	ERCC6L2	Q5T890	1561 aa		29.45	■■■□□ 2.31
LAMB1-205	ENST00000439976	SUPT5H	O00267	1087 aa	Known RBP	29.45	■■■□□ 2.31
LAMB1-205	ENST00000439976	WRN	Q14191	1432 aa	Predicted RBP eCLIP	29.44	■■■□□ 2.3
LAMB1-205	ENST00000439976	ADAMTS12	P58397	1594 aa		29.43	■■■□□ 2.3
LAMB1-205	ENST00000439976	NUP160	Q12769	1436 aa		29.41	■■■□□ 2.3
LAMB1-205	ENST00000439976	CEP170	Q5SW79	1584 aa		29.4	■■■□□ 2.3
LAMB1-205	ENST00000439976	BIVM-ERCC5	R4GMW8	1640 aa		29.39	■■■□□ 2.3
LAMB1-205	ENST00000439976	TOP2B	Q02880	1626 aa		29.38	■■■□□ 2.29
LAMB1-205	ENST00000439976	SHROOM2	Q13796	1616 aa		29.31	■■■□□ 2.28
LAMB1-205	ENST00000439976	FHAD1	B1AJZ9	1412 aa		29.31	■■■□□ 2.28
LAMB1-205	ENST00000439976	ERICH3	Q5RHP9	1530 aa		29.26	■■■□□ 2.27
LAMB1-205	ENST00000439976	PRG4	Q92954	1404 aa	Predicted RBP	29.11	■■■□□ 2.25
LAMB1-205	ENST00000439976	AEBP2	Q6ZN18	517 aa	Predicted RBP	29.1	■■■□□ 2.25
LAMB1-205	ENST00000439976	JPH4	Q96JJ6	628 aa		29.06	■■■□□ 2.24
LAMB1-205	ENST00000439976	KIF13A	Q9H1H9	1805 aa		29.05	■■■□□ 2.24

Retrieved 100 of 20,778 RNA–protein pairs in 234.7 ms