RNA–Protein interactions for RNA: ENST00000439868.1

AC007952.3-203, humanhuman

TSL 5 BASIC

Gene AC007952.3, Length 392 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC007952.3-203ENST00000439868 NISCHQ9Y2I1 1504 aa27.82■■■□□ 2.04
AC007952.3-203ENST00000439868 CCDC180Q9P1Z9 1646 aa25■■□□□ 1.59
AC007952.3-203ENST00000439868 ABCC9O60706 1549 aa24.85■■□□□ 1.57
AC007952.3-203ENST00000439868 RB1CC1Q8TDY2 1594 aa23.74■■□□□ 1.39
AC007952.3-203ENST00000439868 NACADO15069 1562 aa23.58■■□□□ 1.37
AC007952.3-203ENST00000439868 DCAF8L2P0C7V8 631 aa23.42■■□□□ 1.34
AC007952.3-203ENST00000439868 MYO15BQ96JP2 1530 aa23.28■■□□□ 1.32
AC007952.3-203ENST00000439868 UNC13AQ9UPW8 1703 aa23.21■■□□□ 1.31
AC007952.3-203ENST00000439868 DNAJC5BQ9UF47 199 aa23.17■■□□□ 1.3
AC007952.3-203ENST00000439868 PABPN1Q86U42 306 aaKnown RBP eCLIP23.1■■□□□ 1.29
AC007952.3-203ENST00000439868 ZCCHC6Q5VYS8 1495 aaKnown RBP23.07■■□□□ 1.28
AC007952.3-203ENST00000439868 DCAF1Q9Y4B6 1507 aa23■■□□□ 1.27
AC007952.3-203ENST00000439868 BICRAQ9NZM4 1560 aa22.99■■□□□ 1.27
AC007952.3-203ENST00000439868 SHROOM4Q9ULL8 1493 aa22.76■■□□□ 1.23
AC007952.3-203ENST00000439868 SCRIBQ14160 1630 aa22.73■■□□□ 1.23
AC007952.3-203ENST00000439868 CC2D2AQ9P2K1 1620 aa22.47■■□□□ 1.19
AC007952.3-203ENST00000439868 EIF4G1Q04637 1599 aaKnown RBP22.45■■□□□ 1.18
AC007952.3-203ENST00000439868 CECR2Q9BXF3 1484 aa22.39■■□□□ 1.17
AC007952.3-203ENST00000439868 NCAPD3P42695 1498 aa21.73■■□□□ 1.07
AC007952.3-203ENST00000439868 SMARCA4P51532 1647 aa21.7■■□□□ 1.06
AC007952.3-203ENST00000439868 SMARCA2P51531 1590 aa21.67■■□□□ 1.06
AC007952.3-203ENST00000439868 ATAD2BQ9ULI0 1458 aa21.67■■□□□ 1.06
AC007952.3-203ENST00000439868 HMGXB3Q12766 1538 aa21.62■■□□□ 1.05
AC007952.3-203ENST00000439868 BAZ1AQ9NRL2 1556 aaPredicted RBP21.61■■□□□ 1.05
AC007952.3-203ENST00000439868 BAZ1BQ9UIG0 1483 aaKnown RBP21.51■■□□□ 1.03
AC007952.3-203ENST00000439868 PEG3Q9GZU2 1588 aa21.49■■□□□ 1.03
AC007952.3-203ENST00000439868 ERCC6Q03468 1493 aa21.49■■□□□ 1.03
AC007952.3-203ENST00000439868 CUX2O14529 1486 aa21.42■■□□□ 1.02
AC007952.3-203ENST00000439868 MROH2BQ7Z745 1585 aa21.41■■□□□ 1.02
AC007952.3-203ENST00000439868 NESP48681 1621 aa21.35■■□□□ 1.01
AC007952.3-203ENST00000439868 LAMC3Q9Y6N6 1575 aa21.28■■□□□ 1
AC007952.3-203ENST00000439868 DNAJC5Q9H3Z4 198 aa21.28■■□□□ 1
AC007952.3-203ENST00000439868 WIZO95785 1651 aa21.18■□□□□ 0.98
AC007952.3-203ENST00000439868 THOC2Q8NI27 1593 aaKnown RBP21.16■□□□□ 0.98
AC007952.3-203ENST00000439868 KIF21AQ7Z4S6 1674 aa21.14■□□□□ 0.97
AC007952.3-203ENST00000439868 PDS5BQ9NTI5 1447 aa21.13■□□□□ 0.97
AC007952.3-203ENST00000439868 CADPSQ9ULU8 1353 aa21.08■□□□□ 0.96
AC007952.3-203ENST00000439868 RSF1Q96T23 1441 aaPredicted RBP20.99■□□□□ 0.95
AC007952.3-203ENST00000439868 MRC2Q9UBG0 1479 aa20.94■□□□□ 0.94
AC007952.3-203ENST00000439868 TOP2AP11388 1531 aaKnown RBP20.94■□□□□ 0.94
AC007952.3-203ENST00000439868 WDR62O43379 1518 aa20.89■□□□□ 0.94
AC007952.3-203ENST00000439868 CEP164Q9UPV0 1460 aa20.88■□□□□ 0.93
AC007952.3-203ENST00000439868 CFTRP13569 1480 aa20.86■□□□□ 0.93
AC007952.3-203ENST00000439868 FANCD2Q9BXW9 1451 aa20.85■□□□□ 0.93
AC007952.3-203ENST00000439868 PRDM2Q13029 1718 aa20.75■□□□□ 0.91
AC007952.3-203ENST00000439868 CCDC88BA6NC98 1476 aa20.66■□□□□ 0.9
AC007952.3-203ENST00000439868 URB2Q14146 1524 aaKnown RBP20.66■□□□□ 0.9
AC007952.3-203ENST00000439868 TOPBP1Q92547 1522 aa20.47■□□□□ 0.87
AC007952.3-203ENST00000439868 ABCC8Q09428 1581 aa20.46■□□□□ 0.87
AC007952.3-203ENST00000439868 IFT140Q96RY7 1462 aa20.46■□□□□ 0.87
AC007952.3-203ENST00000439868 OSCARQ8IYS5 282 aa20.43■□□□□ 0.86
AC007952.3-203ENST00000439868 DNMBPQ6XZF7 1577 aa20.42■□□□□ 0.86
AC007952.3-203ENST00000439868 TRIM41Q8WV44 630 aa20.38■□□□□ 0.85
AC007952.3-203ENST00000439868 ZNF608Q9ULD9 1512 aaPredicted RBP20.37■□□□□ 0.85
AC007952.3-203ENST00000439868 EIF4G3O43432 1585 aaKnown RBP20.33■□□□□ 0.84
AC007952.3-203ENST00000439868 TARBP1Q13395 1621 aaKnown RBP20.28■□□□□ 0.84
AC007952.3-203ENST00000439868 POLA1P09884 1462 aaPredicted RBP20.25■□□□□ 0.83
AC007952.3-203ENST00000439868 AQRO60306 1485 aaKnown RBP eCLIP20.2■□□□□ 0.82
AC007952.3-203ENST00000439868 RIMBP3CA6NJZ7 1639 aa20.17■□□□□ 0.82
AC007952.3-203ENST00000439868 RIMBP3BA6NNM3 1639 aa20.17■□□□□ 0.82
AC007952.3-203ENST00000439868 RIMBP3Q9UFD9 1639 aa20.17■□□□□ 0.82
AC007952.3-203ENST00000439868 CHD1O14646 1710 aa20.17■□□□□ 0.82
AC007952.3-203ENST00000439868 SOGA1O94964 1423 aa20.16■□□□□ 0.82
AC007952.3-203ENST00000439868 RAD54L2Q9Y4B4 1467 aa20.15■□□□□ 0.82
AC007952.3-203ENST00000439868 FGD5Q6ZNL6 1462 aa20.14■□□□□ 0.81
AC007952.3-203ENST00000439868 WDR97A6NE52 1622 aa20.13■□□□□ 0.81
AC007952.3-203ENST00000439868 CUX1P39880 1505 aa20.12■□□□□ 0.81
AC007952.3-203ENST00000439868 SUPT5HO00267 1087 aaKnown RBP20.11■□□□□ 0.81
AC007952.3-203ENST00000439868 ARHGEF11O15085 1522 aa20.11■□□□□ 0.81
AC007952.3-203ENST00000439868 TDRD9Q8NDG6 1382 aaKnown RBP20.09■□□□□ 0.81
AC007952.3-203ENST00000439868 FBLN2P98095 1184 aa20.08■□□□□ 0.81
AC007952.3-203ENST00000439868 SNAPC4Q5SXM2 1469 aa20.03■□□□□ 0.8
AC007952.3-203ENST00000439868 MAGI1Q96QZ7 1491 aaPredicted RBP20■□□□□ 0.79
AC007952.3-203ENST00000439868 GRIN2BQ13224 1484 aa19.99■□□□□ 0.79
AC007952.3-203ENST00000439868 PBRM1Q86U86 1689 aa19.97■□□□□ 0.79
AC007952.3-203ENST00000439868 CHMP7Q8WUX9 453 aaPredicted RBP19.95■□□□□ 0.78
AC007952.3-203ENST00000439868 SYNJ1O43426 1573 aa19.94■□□□□ 0.78
AC007952.3-203ENST00000439868 GAPVD1Q14C86 1478 aa19.93■□□□□ 0.78
AC007952.3-203ENST00000439868 CYB5RLQ6IPT4 315 aa19.93■□□□□ 0.78
AC007952.3-203ENST00000439868 SYNJ2O15056 1496 aa19.92■□□□□ 0.78
AC007952.3-203ENST00000439868 ABCA10Q8WWZ4 1543 aa19.92■□□□□ 0.78
AC007952.3-203ENST00000439868 ARAP1Q96P48 1450 aa19.91■□□□□ 0.78
AC007952.3-203ENST00000439868 CLASP1Q7Z460 1538 aa19.91■□□□□ 0.78
AC007952.3-203ENST00000439868 ABCA5Q8WWZ7 1642 aa19.9■□□□□ 0.78
AC007952.3-203ENST00000439868 BIVM-ERCC5R4GMW8 1640 aa19.87■□□□□ 0.77
AC007952.3-203ENST00000439868 WRNQ14191 1432 aaPredicted RBP eCLIP19.86■□□□□ 0.77
AC007952.3-203ENST00000439868 TOP2BQ02880 1626 aa19.85■□□□□ 0.77
AC007952.3-203ENST00000439868 ADAMTS12P58397 1594 aa19.75■□□□□ 0.75
AC007952.3-203ENST00000439868 GRIN2AQ12879 1464 aa19.73■□□□□ 0.75
AC007952.3-203ENST00000439868 TRHP20396 242 aaPredicted RBP19.71■□□□□ 0.75
AC007952.3-203ENST00000439868 ERICH3Q5RHP9 1530 aa19.7■□□□□ 0.74
AC007952.3-203ENST00000439868 FHAD1B1AJZ9 1412 aa19.68■□□□□ 0.74
AC007952.3-203ENST00000439868 CEP170Q5SW79 1584 aa19.66■□□□□ 0.74
AC007952.3-203ENST00000439868 NUP160Q12769 1436 aa19.65■□□□□ 0.74
AC007952.3-203ENST00000439868 SHROOM2Q13796 1616 aa19.58■□□□□ 0.73
AC007952.3-203ENST00000439868 ERCC6L2Q5T890 1561 aa19.57■□□□□ 0.72
AC007952.3-203ENST00000439868 RUSC2Q8N2Y8 1516 aa19.47■□□□□ 0.71
AC007952.3-203ENST00000439868 KIF27Q86VH2 1401 aa19.46■□□□□ 0.71
AC007952.3-203ENST00000439868 PRG4Q92954 1404 aaPredicted RBP19.45■□□□□ 0.7
AC007952.3-203ENST00000439868 CUL7Q14999 1698 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms