RNA–Protein interactions for RNA: ENST00000439653.1

AC008175.1-202, humanhuman

TSL 3 BASIC

Gene AC008175.1, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008175.1-202ENST00000439653 AEBP2Q6ZN18 517 aaPredicted RBP21.38■■□□□ 1.01
AC008175.1-202ENST00000439653 CHIC1Q5VXU3 224 aa20.72■□□□□ 0.91
AC008175.1-202ENST00000439653 NISCHQ9Y2I1 1504 aa20.31■□□□□ 0.84
AC008175.1-202ENST00000439653 PHF23Q9BUL5 403 aaPredicted RBP18.28■□□□□ 0.52
AC008175.1-202ENST00000439653 SENP3Q9H4L4 574 aaPredicted RBP18.05■□□□□ 0.48
AC008175.1-202ENST00000439653 CCDC180Q9P1Z9 1646 aa17.88■□□□□ 0.45
AC008175.1-202ENST00000439653 ABCC9O60706 1549 aa17.14■□□□□ 0.33
AC008175.1-202ENST00000439653 ZCCHC6Q5VYS8 1495 aaKnown RBP16.98■□□□□ 0.31
AC008175.1-202ENST00000439653 DCAF1Q9Y4B6 1507 aa16.85■□□□□ 0.29
AC008175.1-202ENST00000439653 DCAF8L2P0C7V8 631 aa16.84■□□□□ 0.29
AC008175.1-202ENST00000439653 FOXD1Q16676 465 aa16.83■□□□□ 0.28
AC008175.1-202ENST00000439653 MYO15BQ96JP2 1530 aa16.8■□□□□ 0.28
AC008175.1-202ENST00000439653 NACADO15069 1562 aa16.76■□□□□ 0.27
AC008175.1-202ENST00000439653 PLPPR3Q6T4P5 718 aa16.75■□□□□ 0.27
AC008175.1-202ENST00000439653 RB1CC1Q8TDY2 1594 aa16.68■□□□□ 0.26
AC008175.1-202ENST00000439653 SCRIBQ14160 1630 aa16.3■□□□□ 0.2
AC008175.1-202ENST00000439653 UNC13AQ9UPW8 1703 aa16.25■□□□□ 0.19
AC008175.1-202ENST00000439653 SHROOM4Q9ULL8 1493 aa16.22■□□□□ 0.19
AC008175.1-202ENST00000439653 PPP6R1Q9UPN7 881 aa16.15■□□□□ 0.18
AC008175.1-202ENST00000439653 BICRAQ9NZM4 1560 aa16.13■□□□□ 0.17
AC008175.1-202ENST00000439653 ADRA2BP18089 450 aa16.11■□□□□ 0.17
AC008175.1-202ENST00000439653 PABPN1Q86U42 306 aaKnown RBP eCLIP16.1■□□□□ 0.17
AC008175.1-202ENST00000439653 PIAS4Q8N2W9 510 aaPredicted RBP15.81■□□□□ 0.12
AC008175.1-202ENST00000439653 CECR2Q9BXF3 1484 aa15.76■□□□□ 0.11
AC008175.1-202ENST00000439653 BAZ1AQ9NRL2 1556 aaPredicted RBP15.71■□□□□ 0.11
AC008175.1-202ENST00000439653 EIF4G1Q04637 1599 aaKnown RBP15.68■□□□□ 0.1
AC008175.1-202ENST00000439653 SMARCA4P51532 1647 aa15.66■□□□□ 0.1
AC008175.1-202ENST00000439653 MROH2BQ7Z745 1585 aa15.63■□□□□ 0.09
AC008175.1-202ENST00000439653 RSF1Q96T23 1441 aaPredicted RBP15.61■□□□□ 0.09
AC008175.1-202ENST00000439653 CC2D2AQ9P2K1 1620 aa15.53■□□□□ 0.08
AC008175.1-202ENST00000439653 PEG3Q9GZU2 1588 aa15.53■□□□□ 0.08
AC008175.1-202ENST00000439653 SMARCA2P51531 1590 aa15.52■□□□□ 0.07
AC008175.1-202ENST00000439653 ATAD2BQ9ULI0 1458 aa15.51■□□□□ 0.07
AC008175.1-202ENST00000439653 SUPT5HO00267 1087 aaKnown RBP15.49■□□□□ 0.07
AC008175.1-202ENST00000439653 MSH5O43196 834 aa15.48■□□□□ 0.07
AC008175.1-202ENST00000439653 NCAPD3P42695 1498 aa15.47■□□□□ 0.07
AC008175.1-202ENST00000439653 WIZO95785 1651 aa15.47■□□□□ 0.07
AC008175.1-202ENST00000439653 DNAJC5BQ9UF47 199 aa15.44■□□□□ 0.06
AC008175.1-202ENST00000439653 HMGXB3Q12766 1538 aa15.4■□□□□ 0.06
AC008175.1-202ENST00000439653 BAZ1BQ9UIG0 1483 aaKnown RBP15.4■□□□□ 0.06
AC008175.1-202ENST00000439653 TOP2AP11388 1531 aaKnown RBP15.35■□□□□ 0.05
AC008175.1-202ENST00000439653 CCDC88BA6NC98 1476 aa15.18■□□□□ 0.02
AC008175.1-202ENST00000439653 CADPSQ9ULU8 1353 aa15.04■□□□□ -0
AC008175.1-202ENST00000439653 CFTRP13569 1480 aa15.01□□□□□ -0.01
AC008175.1-202ENST00000439653 LAMC3Q9Y6N6 1575 aa14.98□□□□□ -0.01
AC008175.1-202ENST00000439653 NESP48681 1621 aa14.93□□□□□ -0.02
AC008175.1-202ENST00000439653 PDS5BQ9NTI5 1447 aa14.9□□□□□ -0.02
AC008175.1-202ENST00000439653 PRDM2Q13029 1718 aa14.89□□□□□ -0.03
AC008175.1-202ENST00000439653 FANCD2Q9BXW9 1451 aa14.83□□□□□ -0.03
AC008175.1-202ENST00000439653 CEP164Q9UPV0 1460 aa14.78□□□□□ -0.04
AC008175.1-202ENST00000439653 PPP4R3CPQ6ZMV5 832 aa14.77□□□□□ -0.05
AC008175.1-202ENST00000439653 ERCC6Q03468 1493 aa14.76□□□□□ -0.05
AC008175.1-202ENST00000439653 KIF21AQ7Z4S6 1674 aa14.75□□□□□ -0.05
AC008175.1-202ENST00000439653 WRNQ14191 1432 aaPredicted RBP eCLIP14.71□□□□□ -0.05
AC008175.1-202ENST00000439653 ABCC8Q09428 1581 aa14.71□□□□□ -0.05
AC008175.1-202ENST00000439653 MRC2Q9UBG0 1479 aa14.69□□□□□ -0.06
AC008175.1-202ENST00000439653 MAPK8IP2Q13387 824 aaPredicted RBP14.66□□□□□ -0.06
AC008175.1-202ENST00000439653 TRIM41Q8WV44 630 aa14.65□□□□□ -0.06
AC008175.1-202ENST00000439653 URB2Q14146 1524 aaKnown RBP14.65□□□□□ -0.06
AC008175.1-202ENST00000439653 DNMBPQ6XZF7 1577 aa14.64□□□□□ -0.07
AC008175.1-202ENST00000439653 CUX1P39880 1505 aa14.64□□□□□ -0.07
AC008175.1-202ENST00000439653 TOPBP1Q92547 1522 aa14.64□□□□□ -0.07
AC008175.1-202ENST00000439653 TOP2BQ02880 1626 aa14.63□□□□□ -0.07
AC008175.1-202ENST00000439653 WDR62O43379 1518 aa14.62□□□□□ -0.07
AC008175.1-202ENST00000439653 THOC2Q8NI27 1593 aaKnown RBP14.62□□□□□ -0.07
AC008175.1-202ENST00000439653 SCAF1Q9H7N4 1312 aaKnown RBP14.62□□□□□ -0.07
AC008175.1-202ENST00000439653 BIVM-ERCC5R4GMW8 1640 aa14.61□□□□□ -0.07
AC008175.1-202ENST00000439653 SYNJ1O43426 1573 aa14.6□□□□□ -0.07
AC008175.1-202ENST00000439653 DNAJC5Q9H3Z4 198 aa14.6□□□□□ -0.07
AC008175.1-202ENST00000439653 FGD5Q6ZNL6 1462 aa14.55□□□□□ -0.08
AC008175.1-202ENST00000439653 POLA1P09884 1462 aaPredicted RBP14.53□□□□□ -0.08
AC008175.1-202ENST00000439653 SOGA1O94964 1423 aa14.51□□□□□ -0.09
AC008175.1-202ENST00000439653 CUX2O14529 1486 aa14.5□□□□□ -0.09
AC008175.1-202ENST00000439653 IFT140Q96RY7 1462 aa14.48□□□□□ -0.09
AC008175.1-202ENST00000439653 RAD54L2Q9Y4B4 1467 aa14.46□□□□□ -0.09
AC008175.1-202ENST00000439653 ABCA10Q8WWZ4 1543 aa14.45□□□□□ -0.1
AC008175.1-202ENST00000439653 TARBP1Q13395 1621 aaKnown RBP14.44□□□□□ -0.1
AC008175.1-202ENST00000439653 DMRT2Q9Y5R5 561 aa14.42□□□□□ -0.1
AC008175.1-202ENST00000439653 KIF27Q86VH2 1401 aa14.4□□□□□ -0.1
AC008175.1-202ENST00000439653 WDR97A6NE52 1622 aa14.37□□□□□ -0.11
AC008175.1-202ENST00000439653 TDRD9Q8NDG6 1382 aaKnown RBP14.37□□□□□ -0.11
AC008175.1-202ENST00000439653 KCNA4P22459 653 aa14.37□□□□□ -0.11
AC008175.1-202ENST00000439653 EEA1Q15075 1411 aa14.37□□□□□ -0.11
AC008175.1-202ENST00000439653 CNKSR2Q8WXI2 1034 aa14.35□□□□□ -0.11
AC008175.1-202ENST00000439653 GAPVD1Q14C86 1478 aa14.34□□□□□ -0.11
AC008175.1-202ENST00000439653 ZNF608Q9ULD9 1512 aaPredicted RBP14.34□□□□□ -0.11
AC008175.1-202ENST00000439653 AQRO60306 1485 aaKnown RBP eCLIP14.33□□□□□ -0.12
AC008175.1-202ENST00000439653 RUSC2Q8N2Y8 1516 aa14.32□□□□□ -0.12
AC008175.1-202ENST00000439653 POTEDQ86YR6 584 aa14.32□□□□□ -0.12
AC008175.1-202ENST00000439653 ABCA5Q8WWZ7 1642 aa14.32□□□□□ -0.12
AC008175.1-202ENST00000439653 CSRNP3Q8WYN3 585 aa14.31□□□□□ -0.12
AC008175.1-202ENST00000439653 IGF1RP08069 1367 aa14.3□□□□□ -0.12
AC008175.1-202ENST00000439653 GRIN2BQ13224 1484 aa14.29□□□□□ -0.12
AC008175.1-202ENST00000439653 EIF4G3O43432 1585 aaKnown RBP14.28□□□□□ -0.12
AC008175.1-202ENST00000439653 NCBP3Q53F19 620 aaKnown RBP14.28□□□□□ -0.12
AC008175.1-202ENST00000439653 ERICH3Q5RHP9 1530 aa14.28□□□□□ -0.12
AC008175.1-202ENST00000439653 FAM9AQ8IZU1 332 aaPredicted RBP14.28□□□□□ -0.12
AC008175.1-202ENST00000439653 PBRM1Q86U86 1689 aa14.23□□□□□ -0.13
AC008175.1-202ENST00000439653 CARMIL1Q5VZK9 1371 aa14.22□□□□□ -0.13
AC008175.1-202ENST00000439653 MAGI1Q96QZ7 1491 aaPredicted RBP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms