RNA–Protein interactions for RNA: ENST00000439642.1

RUBCNL-209, Transcript of RUN and cysteine rich domain containing beclin 1 interacting protein like, humanhuman

TSL 2

Gene RUBCNL, Length 972 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUBCNL-209ENST00000439642 NISCHQ9Y2I1 1504 aa16.16■□□□□ 0.18
RUBCNL-209ENST00000439642 AEBP2Q6ZN18 517 aaPredicted RBP15.59■□□□□ 0.09
RUBCNL-209ENST00000439642 CHIC1Q5VXU3 224 aa14.65□□□□□ -0.06
RUBCNL-209ENST00000439642 CCDC180Q9P1Z9 1646 aa13.97□□□□□ -0.17
RUBCNL-209ENST00000439642 ZCCHC6Q5VYS8 1495 aaKnown RBP13.6□□□□□ -0.23
RUBCNL-209ENST00000439642 SENP3Q9H4L4 574 aaPredicted RBP13.47□□□□□ -0.25
RUBCNL-209ENST00000439642 DCAF1Q9Y4B6 1507 aa13.4□□□□□ -0.26
RUBCNL-209ENST00000439642 DCAF8L2P0C7V8 631 aa13.3□□□□□ -0.28
RUBCNL-209ENST00000439642 SHROOM4Q9ULL8 1493 aa13.25□□□□□ -0.29
RUBCNL-209ENST00000439642 MYO15BQ96JP2 1530 aa13.19□□□□□ -0.3
RUBCNL-209ENST00000439642 PHF23Q9BUL5 403 aaPredicted RBP13.17□□□□□ -0.3
RUBCNL-209ENST00000439642 ABCC9O60706 1549 aa13.07□□□□□ -0.32
RUBCNL-209ENST00000439642 NACADO15069 1562 aa13.03□□□□□ -0.32
RUBCNL-209ENST00000439642 SUPT5HO00267 1087 aaKnown RBP12.88□□□□□ -0.35
RUBCNL-209ENST00000439642 RB1CC1Q8TDY2 1594 aa12.85□□□□□ -0.35
RUBCNL-209ENST00000439642 SCRIBQ14160 1630 aa12.84□□□□□ -0.35
RUBCNL-209ENST00000439642 POTEDQ86YR6 584 aa12.76□□□□□ -0.37
RUBCNL-209ENST00000439642 RSF1Q96T23 1441 aaPredicted RBP12.62□□□□□ -0.39
RUBCNL-209ENST00000439642 FOXD1Q16676 465 aa12.57□□□□□ -0.4
RUBCNL-209ENST00000439642 CECR2Q9BXF3 1484 aa12.53□□□□□ -0.4
RUBCNL-209ENST00000439642 MROH2BQ7Z745 1585 aa12.47□□□□□ -0.41
RUBCNL-209ENST00000439642 UNC13AQ9UPW8 1703 aa12.46□□□□□ -0.41
RUBCNL-209ENST00000439642 BAZ1AQ9NRL2 1556 aaPredicted RBP12.46□□□□□ -0.42
RUBCNL-209ENST00000439642 BICRAQ9NZM4 1560 aa12.43□□□□□ -0.42
RUBCNL-209ENST00000439642 PABPN1Q86U42 306 aaKnown RBP eCLIP12.4□□□□□ -0.42
RUBCNL-209ENST00000439642 SMARCA4P51532 1647 aa12.34□□□□□ -0.43
RUBCNL-209ENST00000439642 WIZO95785 1651 aa12.32□□□□□ -0.44
RUBCNL-209ENST00000439642 TOP2AP11388 1531 aaKnown RBP12.27□□□□□ -0.45
RUBCNL-209ENST00000439642 PEG3Q9GZU2 1588 aa12.22□□□□□ -0.45
RUBCNL-209ENST00000439642 CCDC88BA6NC98 1476 aa12.15□□□□□ -0.46
RUBCNL-209ENST00000439642 ATAD2BQ9ULI0 1458 aa12.15□□□□□ -0.46
RUBCNL-209ENST00000439642 SMARCA2P51531 1590 aa12.14□□□□□ -0.47
RUBCNL-209ENST00000439642 TRIM41Q8WV44 630 aa12.14□□□□□ -0.47
RUBCNL-209ENST00000439642 EIF4G1Q04637 1599 aaKnown RBP12.08□□□□□ -0.48
RUBCNL-209ENST00000439642 BAZ1BQ9UIG0 1483 aaKnown RBP12.08□□□□□ -0.48
RUBCNL-209ENST00000439642 MSH5O43196 834 aa12.06□□□□□ -0.48
RUBCNL-209ENST00000439642 NCAPD3P42695 1498 aa12.06□□□□□ -0.48
RUBCNL-209ENST00000439642 HMGXB3Q12766 1538 aa12.01□□□□□ -0.49
RUBCNL-209ENST00000439642 LOC105371045A0A1W2PR82 267 aa11.95□□□□□ -0.5
RUBCNL-209ENST00000439642 ABCC8Q09428 1581 aa11.88□□□□□ -0.51
RUBCNL-209ENST00000439642 FAM9AQ8IZU1 332 aaPredicted RBP11.87□□□□□ -0.51
RUBCNL-209ENST00000439642 WRNQ14191 1432 aaPredicted RBP eCLIP11.86□□□□□ -0.51
RUBCNL-209ENST00000439642 EEA1Q15075 1411 aa11.83□□□□□ -0.52
RUBCNL-209ENST00000439642 CC2D2AQ9P2K1 1620 aa11.82□□□□□ -0.52
RUBCNL-209ENST00000439642 CFTRP13569 1480 aa11.81□□□□□ -0.52
RUBCNL-209ENST00000439642 CSRNP3Q8WYN3 585 aa11.76□□□□□ -0.53
RUBCNL-209ENST00000439642 CADPSQ9ULU8 1353 aa11.76□□□□□ -0.53
RUBCNL-209ENST00000439642 SOGA1O94964 1423 aa11.76□□□□□ -0.53
RUBCNL-209ENST00000439642 SYNJ1O43426 1573 aa11.75□□□□□ -0.53
RUBCNL-209ENST00000439642 TOP2BQ02880 1626 aa11.71□□□□□ -0.53
RUBCNL-209ENST00000439642 RUSC2Q8N2Y8 1516 aa11.68□□□□□ -0.54
RUBCNL-209ENST00000439642 BIVM-ERCC5R4GMW8 1640 aa11.68□□□□□ -0.54
RUBCNL-209ENST00000439642 TNIKQ9UKE5 1360 aa11.67□□□□□ -0.54
RUBCNL-209ENST00000439642 PIAS4Q8N2W9 510 aaPredicted RBP11.65□□□□□ -0.54
RUBCNL-209ENST00000439642 CUX1P39880 1505 aa11.65□□□□□ -0.55
RUBCNL-209ENST00000439642 EHMT2Q96KQ7 1210 aa11.64□□□□□ -0.55
RUBCNL-209ENST00000439642 GOLGA3Q08378 1498 aa11.63□□□□□ -0.55
RUBCNL-209ENST00000439642 PRDM2Q13029 1718 aa11.62□□□□□ -0.55
RUBCNL-209ENST00000439642 CEP164Q9UPV0 1460 aa11.62□□□□□ -0.55
RUBCNL-209ENST00000439642 DNAJC5BQ9UF47 199 aa11.6□□□□□ -0.55
RUBCNL-209ENST00000439642 UBTFP17480 764 aaKnown RBP11.59□□□□□ -0.55
RUBCNL-209ENST00000439642 TRIM26Q12899 539 aaPredicted RBP11.59□□□□□ -0.55
RUBCNL-209ENST00000439642 KIF21BO75037 1637 aa11.59□□□□□ -0.55
RUBCNL-209ENST00000439642 FANCD2Q9BXW9 1451 aa11.58□□□□□ -0.56
RUBCNL-209ENST00000439642 PCGF6Q9BYE7 350 aa11.58□□□□□ -0.56
RUBCNL-209ENST00000439642 KIF27Q86VH2 1401 aa11.57□□□□□ -0.56
RUBCNL-209ENST00000439642 CEP162Q5TB80 1403 aa11.56□□□□□ -0.56
RUBCNL-209ENST00000439642 LAMC3Q9Y6N6 1575 aa11.56□□□□□ -0.56
RUBCNL-209ENST00000439642 PRXQ9BXM0 1461 aa11.53□□□□□ -0.56
RUBCNL-209ENST00000439642 NESP48681 1621 aa11.52□□□□□ -0.57
RUBCNL-209ENST00000439642 PDS5BQ9NTI5 1447 aa11.52□□□□□ -0.57
RUBCNL-209ENST00000439642 FGD5Q6ZNL6 1462 aa11.51□□□□□ -0.57
RUBCNL-209ENST00000439642 ERICH3Q5RHP9 1530 aa11.5□□□□□ -0.57
RUBCNL-209ENST00000439642 RAPGEF2Q9Y4G8 1499 aa11.5□□□□□ -0.57
RUBCNL-209ENST00000439642 DNMBPQ6XZF7 1577 aa11.5□□□□□ -0.57
RUBCNL-209ENST00000439642 TOPBP1Q92547 1522 aa11.47□□□□□ -0.57
RUBCNL-209ENST00000439642 CUX2O14529 1486 aa11.47□□□□□ -0.57
RUBCNL-209ENST00000439642 IGF1RP08069 1367 aa11.47□□□□□ -0.57
RUBCNL-209ENST00000439642 PLPPR3Q6T4P5 718 aa11.46□□□□□ -0.57
RUBCNL-209ENST00000439642 CLIP1P30622 1438 aa11.45□□□□□ -0.58
RUBCNL-209ENST00000439642 ABCA10Q8WWZ4 1543 aa11.43□□□□□ -0.58
RUBCNL-209ENST00000439642 URB2Q14146 1524 aaKnown RBP11.42□□□□□ -0.58
RUBCNL-209ENST00000439642 HRCP23327 699 aa11.42□□□□□ -0.58
RUBCNL-209ENST00000439642 POLA1P09884 1462 aaPredicted RBP11.42□□□□□ -0.58
RUBCNL-209ENST00000439642 CARMIL1Q5VZK9 1371 aa11.41□□□□□ -0.58
RUBCNL-209ENST00000439642 RAD54L2Q9Y4B4 1467 aa11.38□□□□□ -0.59
RUBCNL-209ENST00000439642 VPS8Q8N3P4 1428 aa11.38□□□□□ -0.59
RUBCNL-209ENST00000439642 MRC2Q9UBG0 1479 aa11.33□□□□□ -0.6
RUBCNL-209ENST00000439642 PPARGC1BQ86YN6 1023 aaKnown RBP11.33□□□□□ -0.6
RUBCNL-209ENST00000439642 KIF21AQ7Z4S6 1674 aa11.31□□□□□ -0.6
RUBCNL-209ENST00000439642 APLP2Q06481 763 aa11.31□□□□□ -0.6
RUBCNL-209ENST00000439642 ARAP1Q96P48 1450 aa11.29□□□□□ -0.6
RUBCNL-209ENST00000439642 TDRD9Q8NDG6 1382 aaKnown RBP11.28□□□□□ -0.6
RUBCNL-209ENST00000439642 WDR97A6NE52 1622 aa11.28□□□□□ -0.6
RUBCNL-209ENST00000439642 CUL7Q14999 1698 aa11.28□□□□□ -0.6
RUBCNL-209ENST00000439642 GAPVD1Q14C86 1478 aa11.28□□□□□ -0.6
RUBCNL-209ENST00000439642 RANGAP1P46060 587 aaPredicted RBP11.28□□□□□ -0.6
RUBCNL-209ENST00000439642 ABCA5Q8WWZ7 1642 aa11.27□□□□□ -0.61
RUBCNL-209ENST00000439642 ARHGAP35Q9NRY4 1499 aa11.26□□□□□ -0.61
RUBCNL-209ENST00000439642 ZEB1P37275 1124 aaPredicted RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms