RNA–Protein interactions for RNA: ENST00000439524.2

SLC38A3-203, Transcript of solute carrier family 38 member 3, humanhuman

TSL 3

Gene SLC38A3, Length 424 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A3-203ENST00000439524 NISCHQ9Y2I1 1504 aa29.44■■■□□ 2.3
SLC38A3-203ENST00000439524 ABCC9O60706 1549 aa26.68■■□□□ 1.86
SLC38A3-203ENST00000439524 CCDC180Q9P1Z9 1646 aa26.48■■□□□ 1.83
SLC38A3-203ENST00000439524 RB1CC1Q8TDY2 1594 aa25.26■■□□□ 1.63
SLC38A3-203ENST00000439524 DNAJC5BQ9UF47 199 aa25.15■■□□□ 1.62
SLC38A3-203ENST00000439524 NACADO15069 1562 aa25.02■■□□□ 1.6
SLC38A3-203ENST00000439524 DCAF8L2P0C7V8 631 aa24.96■■□□□ 1.59
SLC38A3-203ENST00000439524 PABPN1Q86U42 306 aaKnown RBP eCLIP24.81■■□□□ 1.56
SLC38A3-203ENST00000439524 UNC13AQ9UPW8 1703 aa24.81■■□□□ 1.56
SLC38A3-203ENST00000439524 MYO15BQ96JP2 1530 aa24.74■■□□□ 1.55
SLC38A3-203ENST00000439524 BICRAQ9NZM4 1560 aa24.59■■□□□ 1.53
SLC38A3-203ENST00000439524 ZCCHC6Q5VYS8 1495 aaKnown RBP24.47■■□□□ 1.51
SLC38A3-203ENST00000439524 DCAF1Q9Y4B6 1507 aa24.44■■□□□ 1.5
SLC38A3-203ENST00000439524 SCRIBQ14160 1630 aa24.21■■□□□ 1.47
SLC38A3-203ENST00000439524 SHROOM4Q9ULL8 1493 aa24.19■■□□□ 1.46
SLC38A3-203ENST00000439524 CC2D2AQ9P2K1 1620 aa24.08■■□□□ 1.45
SLC38A3-203ENST00000439524 CECR2Q9BXF3 1484 aa24■■□□□ 1.43
SLC38A3-203ENST00000439524 EIF4G1Q04637 1599 aaKnown RBP23.97■■□□□ 1.43
SLC38A3-203ENST00000439524 DNAJC5Q9H3Z4 198 aa23.1■■□□□ 1.29
SLC38A3-203ENST00000439524 NCAPD3P42695 1498 aa23.1■■□□□ 1.29
SLC38A3-203ENST00000439524 ATAD2BQ9ULI0 1458 aa23.05■■□□□ 1.28
SLC38A3-203ENST00000439524 SMARCA4P51532 1647 aa23.02■■□□□ 1.28
SLC38A3-203ENST00000439524 ERCC6Q03468 1493 aa22.99■■□□□ 1.27
SLC38A3-203ENST00000439524 SMARCA2P51531 1590 aa22.95■■□□□ 1.26
SLC38A3-203ENST00000439524 CUX2O14529 1486 aa22.94■■□□□ 1.26
SLC38A3-203ENST00000439524 HMGXB3Q12766 1538 aa22.93■■□□□ 1.26
SLC38A3-203ENST00000439524 BAZ1AQ9NRL2 1556 aaPredicted RBP22.92■■□□□ 1.26
SLC38A3-203ENST00000439524 NESP48681 1621 aa22.9■■□□□ 1.26
SLC38A3-203ENST00000439524 BAZ1BQ9UIG0 1483 aaKnown RBP22.82■■□□□ 1.24
SLC38A3-203ENST00000439524 PEG3Q9GZU2 1588 aa22.8■■□□□ 1.24
SLC38A3-203ENST00000439524 MROH2BQ7Z745 1585 aa22.72■■□□□ 1.23
SLC38A3-203ENST00000439524 THOC2Q8NI27 1593 aaKnown RBP22.67■■□□□ 1.22
SLC38A3-203ENST00000439524 LAMC3Q9Y6N6 1575 aa22.62■■□□□ 1.21
SLC38A3-203ENST00000439524 KIF21AQ7Z4S6 1674 aa22.62■■□□□ 1.21
SLC38A3-203ENST00000439524 WIZO95785 1651 aa22.49■■□□□ 1.19
SLC38A3-203ENST00000439524 PDS5BQ9NTI5 1447 aa22.47■■□□□ 1.19
SLC38A3-203ENST00000439524 CADPSQ9ULU8 1353 aa22.39■■□□□ 1.18
SLC38A3-203ENST00000439524 MRC2Q9UBG0 1479 aa22.33■■□□□ 1.16
SLC38A3-203ENST00000439524 WDR62O43379 1518 aa22.28■■□□□ 1.16
SLC38A3-203ENST00000439524 RSF1Q96T23 1441 aaPredicted RBP22.22■■□□□ 1.15
SLC38A3-203ENST00000439524 CEP164Q9UPV0 1460 aa22.22■■□□□ 1.15
SLC38A3-203ENST00000439524 TOP2AP11388 1531 aaKnown RBP22.19■■□□□ 1.14
SLC38A3-203ENST00000439524 FANCD2Q9BXW9 1451 aa22.18■■□□□ 1.14
SLC38A3-203ENST00000439524 TRIM41Q8WV44 630 aa22.13■■□□□ 1.13
SLC38A3-203ENST00000439524 CFTRP13569 1480 aa22.12■■□□□ 1.13
SLC38A3-203ENST00000439524 URB2Q14146 1524 aaKnown RBP22.04■■□□□ 1.12
SLC38A3-203ENST00000439524 PRDM2Q13029 1718 aa21.97■■□□□ 1.11
SLC38A3-203ENST00000439524 CCDC88BA6NC98 1476 aa21.89■■□□□ 1.09
SLC38A3-203ENST00000439524 OSCARQ8IYS5 282 aa21.87■■□□□ 1.09
SLC38A3-203ENST00000439524 ZNF608Q9ULD9 1512 aaPredicted RBP21.8■■□□□ 1.08
SLC38A3-203ENST00000439524 TOPBP1Q92547 1522 aa21.75■■□□□ 1.07
SLC38A3-203ENST00000439524 IFT140Q96RY7 1462 aa21.75■■□□□ 1.07
SLC38A3-203ENST00000439524 RIMBP3CA6NJZ7 1639 aa21.7■■□□□ 1.06
SLC38A3-203ENST00000439524 RIMBP3BA6NNM3 1639 aa21.7■■□□□ 1.06
SLC38A3-203ENST00000439524 RIMBP3Q9UFD9 1639 aa21.7■■□□□ 1.06
SLC38A3-203ENST00000439524 ABCC8Q09428 1581 aa21.7■■□□□ 1.06
SLC38A3-203ENST00000439524 EIF4G3O43432 1585 aaKnown RBP21.68■■□□□ 1.06
SLC38A3-203ENST00000439524 DNMBPQ6XZF7 1577 aa21.66■■□□□ 1.06
SLC38A3-203ENST00000439524 TARBP1Q13395 1621 aaKnown RBP21.59■■□□□ 1.05
SLC38A3-203ENST00000439524 ARHGEF11O15085 1522 aa21.59■■□□□ 1.05
SLC38A3-203ENST00000439524 CHD1O14646 1710 aa21.58■■□□□ 1.05
SLC38A3-203ENST00000439524 AQRO60306 1485 aaKnown RBP eCLIP21.58■■□□□ 1.043e-6■■□□□ 13.8
SLC38A3-203ENST00000439524 POLA1P09884 1462 aaPredicted RBP21.52■■□□□ 1.04
SLC38A3-203ENST00000439524 RAD54L2Q9Y4B4 1467 aa21.49■■□□□ 1.03
SLC38A3-203ENST00000439524 FBLN2P98095 1184 aa21.46■■□□□ 1.03
SLC38A3-203ENST00000439524 CYB5RLQ6IPT4 315 aa21.43■■□□□ 1.02
SLC38A3-203ENST00000439524 TDRD9Q8NDG6 1382 aaKnown RBP21.41■■□□□ 1.02
SLC38A3-203ENST00000439524 SOGA1O94964 1423 aa21.4■■□□□ 1.02
SLC38A3-203ENST00000439524 WDR97A6NE52 1622 aa21.39■■□□□ 1.01
SLC38A3-203ENST00000439524 FGD5Q6ZNL6 1462 aa21.39■■□□□ 1.01
SLC38A3-203ENST00000439524 ARAP1Q96P48 1450 aa21.38■■□□□ 1.01
SLC38A3-203ENST00000439524 CUX1P39880 1505 aa21.36■■□□□ 1.01
SLC38A3-203ENST00000439524 SNAPC4Q5SXM2 1469 aa21.35■■□□□ 1.01
SLC38A3-203ENST00000439524 CLASP1Q7Z460 1538 aa21.26■□□□□ 0.99
SLC38A3-203ENST00000439524 TRHP20396 242 aaPredicted RBP21.25■□□□□ 0.99
SLC38A3-203ENST00000439524 CHMP7Q8WUX9 453 aaPredicted RBP21.23■□□□□ 0.99
SLC38A3-203ENST00000439524 PBRM1Q86U86 1689 aa21.22■□□□□ 0.99
SLC38A3-203ENST00000439524 GRIN2BQ13224 1484 aa21.22■□□□□ 0.99
SLC38A3-203ENST00000439524 MAGI1Q96QZ7 1491 aaPredicted RBP21.22■□□□□ 0.99
SLC38A3-203ENST00000439524 SUPT5HO00267 1087 aaKnown RBP21.22■□□□□ 0.99
SLC38A3-203ENST00000439524 SYNJ1O43426 1573 aa21.22■□□□□ 0.99
SLC38A3-203ENST00000439524 SYNJ2O15056 1496 aa21.17■□□□□ 0.98
SLC38A3-203ENST00000439524 GAPVD1Q14C86 1478 aa21.14■□□□□ 0.98
SLC38A3-203ENST00000439524 ABCA5Q8WWZ7 1642 aa21.12■□□□□ 0.97
SLC38A3-203ENST00000439524 ABCA10Q8WWZ4 1543 aa21.1■□□□□ 0.97
SLC38A3-203ENST00000439524 WRNQ14191 1432 aaPredicted RBP eCLIP21.05■□□□□ 0.96
SLC38A3-203ENST00000439524 TOP2BQ02880 1626 aa21.04■□□□□ 0.96
SLC38A3-203ENST00000439524 BIVM-ERCC5R4GMW8 1640 aa21.04■□□□□ 0.96
SLC38A3-203ENST00000439524 ERCC6L2Q5T890 1561 aa21■□□□□ 0.95
SLC38A3-203ENST00000439524 ADAMTS12P58397 1594 aa20.97■□□□□ 0.95
SLC38A3-203ENST00000439524 GRIN2AQ12879 1464 aa20.97■□□□□ 0.95
SLC38A3-203ENST00000439524 CEP170Q5SW79 1584 aa20.95■□□□□ 0.94
SLC38A3-203ENST00000439524 NUP160Q12769 1436 aa20.88■□□□□ 0.93
SLC38A3-203ENST00000439524 ERICH3Q5RHP9 1530 aa20.88■□□□□ 0.93
SLC38A3-203ENST00000439524 FHAD1B1AJZ9 1412 aa20.85■□□□□ 0.93
SLC38A3-203ENST00000439524 SHROOM2Q13796 1616 aa20.84■□□□□ 0.93
SLC38A3-203ENST00000439524 PRG4Q92954 1404 aaPredicted RBP20.71■□□□□ 0.91
SLC38A3-203ENST00000439524 AEBP2Q6ZN18 517 aaPredicted RBP20.7■□□□□ 0.9
SLC38A3-203ENST00000439524 KIF13AQ9H1H9 1805 aa20.69■□□□□ 0.9
SLC38A3-203ENST00000439524 RUSC2Q8N2Y8 1516 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms