RNA–Protein interactions for RNA: ENST00000439230.5

TNK2-212, Transcript of tyrosine kinase non receptor 2, humanhuman

TSL 1 (best)

Gene TNK2, Length 2,331 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNK2-212ENST00000439230 SF3B1O75533 1304 aaKnown RBP eCLIP18.85■□□□□ 0.612e-6■■■■■ 90.1
TNK2-212ENST00000439230 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.84■□□□□ 0.777e-7■■■■■ 71.6
TNK2-212ENST00000439230 GTF2F1P35269 517 aaKnown RBP eCLIP21.18■□□□□ 0.985e-8■■■■■ 58.5
TNK2-212ENST00000439230 LSM11P83369 360 aaKnown RBP eCLIP17.3■□□□□ 0.363e-11■■■■■ 40.1
TNK2-212ENST00000439230 RBM15Q96T37 977 aaKnown RBP eCLIP19.37■□□□□ 0.693e-11■■■■■ 37.2
TNK2-212ENST00000439230 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.57■□□□□ 0.44e-6■■■■■ 36.3
TNK2-212ENST00000439230 FUSP35637 526 aaKnown RBP eCLIP11.63□□□□□ -0.553e-12■■■■■ 34.8
TNK2-212ENST00000439230 SF3B4Q15427 424 aaKnown RBP eCLIP16.9■□□□□ 0.33e-8■■■■■ 30.6
TNK2-212ENST00000439230 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.4■□□□□ 0.548e-7■■■■■ 29.9
TNK2-212ENST00000439230 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.7■■□□□ 1.865e-7■■■■■ 29.7
TNK2-212ENST00000439230 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.48■□□□□ 0.392e-9■■■■■ 28.2
TNK2-212ENST00000439230 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19■□□□□ 0.633e-6■■■■■ 26.8
TNK2-212ENST00000439230 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.73■□□□□ 0.279e-7■■■■□ 24.9
TNK2-212ENST00000439230 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.68■□□□□ 0.742e-8■■■■□ 24.5
TNK2-212ENST00000439230 EWSR1Q01844 656 aaKnown RBP eCLIP15.63■□□□□ 0.094e-7■■■■□ 22.4
TNK2-212ENST00000439230 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.92□□□□□ -0.181e-7■■■■□ 20.3
TNK2-212ENST00000439230 SAFB2Q14151 953 aaKnown RBP eCLIP24■■□□□ 1.434e-6■■■□□ 19
TNK2-212ENST00000439230 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.25■□□□□ 0.679e-7■■■□□ 18.3
TNK2-212ENST00000439230 NONOQ15233 471 aaKnown RBP eCLIP20.67■□□□□ 0.92e-6■■■□□ 17.8
TNK2-212ENST00000439230 PRPF4O43172 522 aaKnown RBP eCLIP19.19■□□□□ 0.664e-10■■■□□ 17.2
TNK2-212ENST00000439230 PPIGQ13427 754 aaKnown RBP eCLIP17.55■□□□□ 0.46e-7■■■□□ 15.6
TNK2-212ENST00000439230 PCBP2Q15366 365 aaKnown RBP eCLIP18.09■□□□□ 0.494e-6■■■□□ 15
TNK2-212ENST00000439230 GRSF1Q12849 480 aaKnown RBP eCLIP17.73■□□□□ 0.433e-7■■□□□ 13.6
TNK2-212ENST00000439230 FKBP4Q02790 459 aaKnown RBP eCLIP21.72■■□□□ 1.071e-9■■□□□ 11.9
TNK2-212ENST00000439230 NKRFO15226 690 aaKnown RBP eCLIP20.49■□□□□ 0.873e-7■■□□□ 11.5
Retrieved 25 of 25 RNA–protein pairs in 6.9 ms