RNA–Protein interactions for RNA: ENST00000439053.1

AC011742.3-201, humanhuman

BASIC

Gene AC011742.3, Length 820 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC011742.3-201ENST00000439053 NISCHQ9Y2I1 1504 aa35.62■■■■□ 3.29
AC011742.3-201ENST00000439053 CCDC180Q9P1Z9 1646 aa31.82■■■□□ 2.69
AC011742.3-201ENST00000439053 ABCC9O60706 1549 aa31.49■■■□□ 2.63
AC011742.3-201ENST00000439053 RB1CC1Q8TDY2 1594 aa30.17■■■□□ 2.42
AC011742.3-201ENST00000439053 NACADO15069 1562 aa30.04■■■□□ 2.4
AC011742.3-201ENST00000439053 DCAF8L2P0C7V8 631 aa29.98■■■□□ 2.39
AC011742.3-201ENST00000439053 MYO15BQ96JP2 1530 aa29.76■■■□□ 2.35
AC011742.3-201ENST00000439053 ZCCHC6Q5VYS8 1495 aaKnown RBP29.61■■■□□ 2.33
AC011742.3-201ENST00000439053 DCAF1Q9Y4B6 1507 aa29.49■■■□□ 2.31
AC011742.3-201ENST00000439053 PABPN1Q86U42 306 aaKnown RBP eCLIP29.35■■■□□ 2.29
AC011742.3-201ENST00000439053 UNC13AQ9UPW8 1703 aa29.24■■■□□ 2.27
AC011742.3-201ENST00000439053 BICRAQ9NZM4 1560 aa29.13■■■□□ 2.25
AC011742.3-201ENST00000439053 DNAJC5BQ9UF47 199 aa29.09■■■□□ 2.25
AC011742.3-201ENST00000439053 SCRIBQ14160 1630 aa29.01■■■□□ 2.23
AC011742.3-201ENST00000439053 SHROOM4Q9ULL8 1493 aa29■■■□□ 2.23
AC011742.3-201ENST00000439053 EIF4G1Q04637 1599 aaKnown RBP28.48■■■□□ 2.15
AC011742.3-201ENST00000439053 CC2D2AQ9P2K1 1620 aa28.42■■■□□ 2.14
AC011742.3-201ENST00000439053 CECR2Q9BXF3 1484 aa28.36■■■□□ 2.13
AC011742.3-201ENST00000439053 NCAPD3P42695 1498 aa27.71■■■□□ 2.03
AC011742.3-201ENST00000439053 SMARCA4P51532 1647 aa27.7■■■□□ 2.02
AC011742.3-201ENST00000439053 BAZ1AQ9NRL2 1556 aaPredicted RBP27.69■■■□□ 2.02
AC011742.3-201ENST00000439053 SMARCA2P51531 1590 aa27.67■■■□□ 2.02
AC011742.3-201ENST00000439053 ATAD2BQ9ULI0 1458 aa27.66■■■□□ 2.02
AC011742.3-201ENST00000439053 HMGXB3Q12766 1538 aa27.56■■■□□ 2
AC011742.3-201ENST00000439053 BAZ1BQ9UIG0 1483 aaKnown RBP27.47■■□□□ 1.99
AC011742.3-201ENST00000439053 PEG3Q9GZU2 1588 aa27.44■■□□□ 1.98
AC011742.3-201ENST00000439053 MROH2BQ7Z745 1585 aa27.41■■□□□ 1.98
AC011742.3-201ENST00000439053 ERCC6Q03468 1493 aa27.26■■□□□ 1.95
AC011742.3-201ENST00000439053 NESP48681 1621 aa27.08■■□□□ 1.93
AC011742.3-201ENST00000439053 CUX2O14529 1486 aa27.06■■□□□ 1.92
AC011742.3-201ENST00000439053 WIZO95785 1651 aa27.06■■□□□ 1.92
AC011742.3-201ENST00000439053 LAMC3Q9Y6N6 1575 aa27.05■■□□□ 1.92
AC011742.3-201ENST00000439053 RSF1Q96T23 1441 aaPredicted RBP27■■□□□ 1.91
AC011742.3-201ENST00000439053 PDS5BQ9NTI5 1447 aa26.94■■□□□ 1.9
AC011742.3-201ENST00000439053 CADPSQ9ULU8 1353 aa26.91■■□□□ 1.9
AC011742.3-201ENST00000439053 TOP2AP11388 1531 aaKnown RBP26.85■■□□□ 1.89
AC011742.3-201ENST00000439053 THOC2Q8NI27 1593 aaKnown RBP26.76■■□□□ 1.87
AC011742.3-201ENST00000439053 KIF21AQ7Z4S6 1674 aa26.71■■□□□ 1.87
AC011742.3-201ENST00000439053 CFTRP13569 1480 aa26.66■■□□□ 1.86
AC011742.3-201ENST00000439053 MRC2Q9UBG0 1479 aa26.65■■□□□ 1.86
AC011742.3-201ENST00000439053 CEP164Q9UPV0 1460 aa26.63■■□□□ 1.85
AC011742.3-201ENST00000439053 FANCD2Q9BXW9 1451 aa26.6■■□□□ 1.85
AC011742.3-201ENST00000439053 DNAJC5Q9H3Z4 198 aa26.58■■□□□ 1.85
AC011742.3-201ENST00000439053 WDR62O43379 1518 aa26.53■■□□□ 1.84
AC011742.3-201ENST00000439053 CCDC88BA6NC98 1476 aa26.5■■□□□ 1.83
AC011742.3-201ENST00000439053 PRDM2Q13029 1718 aa26.31■■□□□ 1.8
AC011742.3-201ENST00000439053 URB2Q14146 1524 aaKnown RBP26.29■■□□□ 1.8
AC011742.3-201ENST00000439053 ABCC8Q09428 1581 aa26.16■■□□□ 1.78
AC011742.3-201ENST00000439053 SUPT5HO00267 1087 aaKnown RBP26.12■■□□□ 1.77
AC011742.3-201ENST00000439053 TOPBP1Q92547 1522 aa26.1■■□□□ 1.77
AC011742.3-201ENST00000439053 IFT140Q96RY7 1462 aa26.09■■□□□ 1.77
AC011742.3-201ENST00000439053 DNMBPQ6XZF7 1577 aa26.06■■□□□ 1.76
AC011742.3-201ENST00000439053 ZNF608Q9ULD9 1512 aaPredicted RBP25.9■■□□□ 1.74
AC011742.3-201ENST00000439053 OSCARQ8IYS5 282 aa25.88■■□□□ 1.73
AC011742.3-201ENST00000439053 POLA1P09884 1462 aaPredicted RBP25.86■■□□□ 1.73
AC011742.3-201ENST00000439053 EIF4G3O43432 1585 aaKnown RBP25.82■■□□□ 1.72
AC011742.3-201ENST00000439053 TARBP1Q13395 1621 aaKnown RBP25.79■■□□□ 1.72
AC011742.3-201ENST00000439053 SOGA1O94964 1423 aa25.79■■□□□ 1.72
AC011742.3-201ENST00000439053 FGD5Q6ZNL6 1462 aa25.76■■□□□ 1.71
AC011742.3-201ENST00000439053 CUX1P39880 1505 aa25.74■■□□□ 1.71
AC011742.3-201ENST00000439053 AQRO60306 1485 aaKnown RBP eCLIP25.73■■□□□ 1.71
AC011742.3-201ENST00000439053 RAD54L2Q9Y4B4 1467 aa25.72■■□□□ 1.71
AC011742.3-201ENST00000439053 WDR97A6NE52 1622 aa25.68■■□□□ 1.7
AC011742.3-201ENST00000439053 TDRD9Q8NDG6 1382 aaKnown RBP25.66■■□□□ 1.7
AC011742.3-201ENST00000439053 TRIM41Q8WV44 630 aa25.61■■□□□ 1.69
AC011742.3-201ENST00000439053 FBLN2P98095 1184 aa25.59■■□□□ 1.69
AC011742.3-201ENST00000439053 GRIN2BQ13224 1484 aa25.55■■□□□ 1.68
AC011742.3-201ENST00000439053 WRNQ14191 1432 aaPredicted RBP eCLIP25.54■■□□□ 1.68
AC011742.3-201ENST00000439053 SNAPC4Q5SXM2 1469 aa25.53■■□□□ 1.68
AC011742.3-201ENST00000439053 MAGI1Q96QZ7 1491 aaPredicted RBP25.52■■□□□ 1.68
AC011742.3-201ENST00000439053 ABCA10Q8WWZ4 1543 aa25.5■■□□□ 1.67
AC011742.3-201ENST00000439053 GAPVD1Q14C86 1478 aa25.48■■□□□ 1.67
AC011742.3-201ENST00000439053 CHMP7Q8WUX9 453 aaPredicted RBP25.48■■□□□ 1.67
AC011742.3-201ENST00000439053 CHD1O14646 1710 aa25.47■■□□□ 1.67
AC011742.3-201ENST00000439053 TOP2BQ02880 1626 aa25.45■■□□□ 1.67
AC011742.3-201ENST00000439053 BIVM-ERCC5R4GMW8 1640 aa25.43■■□□□ 1.66
AC011742.3-201ENST00000439053 ARHGEF11O15085 1522 aa25.42■■□□□ 1.66
AC011742.3-201ENST00000439053 SYNJ2O15056 1496 aa25.41■■□□□ 1.66
AC011742.3-201ENST00000439053 RIMBP3CA6NJZ7 1639 aa25.41■■□□□ 1.66
AC011742.3-201ENST00000439053 RIMBP3BA6NNM3 1639 aa25.41■■□□□ 1.66
AC011742.3-201ENST00000439053 RIMBP3Q9UFD9 1639 aa25.41■■□□□ 1.66
AC011742.3-201ENST00000439053 SYNJ1O43426 1573 aa25.39■■□□□ 1.66
AC011742.3-201ENST00000439053 ABCA5Q8WWZ7 1642 aa25.38■■□□□ 1.65
AC011742.3-201ENST00000439053 PBRM1Q86U86 1689 aa25.35■■□□□ 1.65
AC011742.3-201ENST00000439053 CLASP1Q7Z460 1538 aa25.27■■□□□ 1.64
AC011742.3-201ENST00000439053 CYB5RLQ6IPT4 315 aa25.22■■□□□ 1.63
AC011742.3-201ENST00000439053 ERICH3Q5RHP9 1530 aa25.21■■□□□ 1.63
AC011742.3-201ENST00000439053 ADAMTS12P58397 1594 aa25.2■■□□□ 1.62
AC011742.3-201ENST00000439053 FHAD1B1AJZ9 1412 aa25.2■■□□□ 1.62
AC011742.3-201ENST00000439053 GRIN2AQ12879 1464 aa25.19■■□□□ 1.62
AC011742.3-201ENST00000439053 ARAP1Q96P48 1450 aa25.16■■□□□ 1.62
AC011742.3-201ENST00000439053 NUP160Q12769 1436 aa25.07■■□□□ 1.6
AC011742.3-201ENST00000439053 KIF27Q86VH2 1401 aa25.06■■□□□ 1.6
AC011742.3-201ENST00000439053 CEP170Q5SW79 1584 aa25.02■■□□□ 1.6
AC011742.3-201ENST00000439053 IGF1RP08069 1367 aa24.92■■□□□ 1.58
AC011742.3-201ENST00000439053 TRHP20396 242 aaPredicted RBP24.9■■□□□ 1.58
AC011742.3-201ENST00000439053 CUL7Q14999 1698 aa24.9■■□□□ 1.58
AC011742.3-201ENST00000439053 SHROOM2Q13796 1616 aa24.87■■□□□ 1.57
AC011742.3-201ENST00000439053 RUSC2Q8N2Y8 1516 aa24.83■■□□□ 1.57
AC011742.3-201ENST00000439053 JPH4Q96JJ6 628 aa24.83■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms