RNA–Protein interactions for RNA: ENST00000439046.1

AC019117.1-202, humanhuman

TSL 3 BASIC

Gene AC019117.1, Length 589 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC019117.1-202ENST00000439046 AEBP2Q6ZN18 517 aaPredicted RBP23.56■■□□□ 1.36
AC019117.1-202ENST00000439046 CHIC1Q5VXU3 224 aa23.19■■□□□ 1.3
AC019117.1-202ENST00000439046 PHF23Q9BUL5 403 aaPredicted RBP20.35■□□□□ 0.85
AC019117.1-202ENST00000439046 SENP3Q9H4L4 574 aaPredicted RBP20.08■□□□□ 0.81
AC019117.1-202ENST00000439046 PLPPR3Q6T4P5 718 aa18.94■□□□□ 0.62
AC019117.1-202ENST00000439046 FOXD1Q16676 465 aa18.54■□□□□ 0.56
AC019117.1-202ENST00000439046 ADRA2BP18089 450 aa17.93■□□□□ 0.46
AC019117.1-202ENST00000439046 PPP6R1Q9UPN7 881 aa17.91■□□□□ 0.46
AC019117.1-202ENST00000439046 PIAS4Q8N2W9 510 aaPredicted RBP17.58■□□□□ 0.4
AC019117.1-202ENST00000439046 MSH5O43196 834 aa17.14■□□□□ 0.33
AC019117.1-202ENST00000439046 PPP4R3CPQ6ZMV5 832 aa16.67■□□□□ 0.26
AC019117.1-202ENST00000439046 SCAF1Q9H7N4 1312 aaKnown RBP16.52■□□□□ 0.24
AC019117.1-202ENST00000439046 KCNA4P22459 653 aa16.4■□□□□ 0.22
AC019117.1-202ENST00000439046 NCBP3Q53F19 620 aaKnown RBP16.35■□□□□ 0.21
AC019117.1-202ENST00000439046 MAPK8IP2Q13387 824 aaPredicted RBP16.21■□□□□ 0.19
AC019117.1-202ENST00000439046 CNKSR2Q8WXI2 1034 aa16.2■□□□□ 0.18
AC019117.1-202ENST00000439046 NPM3O75607 178 aaKnown RBP16.02■□□□□ 0.16
AC019117.1-202ENST00000439046 DMRT2Q9Y5R5 561 aa16.01■□□□□ 0.15
AC019117.1-202ENST00000439046 RNF216Q9NWF9 866 aaPredicted RBP15.85■□□□□ 0.13
AC019117.1-202ENST00000439046 HOXD11P31277 338 aaPredicted RBP15.72■□□□□ 0.11
AC019117.1-202ENST00000439046 SLC4A1APQ9BWU0 796 aaKnown RBP15.69■□□□□ 0.1
AC019117.1-202ENST00000439046 DNAJC5BQ9UF47 199 aa15.53■□□□□ 0.08
AC019117.1-202ENST00000439046 EHMT2Q96KQ7 1210 aa15.4■□□□□ 0.06
AC019117.1-202ENST00000439046 DCAF8L1A6NGE4 600 aa15.38■□□□□ 0.05
AC019117.1-202ENST00000439046 POTEDQ86YR6 584 aa15.32■□□□□ 0.04
AC019117.1-202ENST00000439046 FOXD4L1Q9NU39 408 aa15.11■□□□□ 0.01
AC019117.1-202ENST00000439046 CSRNP3Q8WYN3 585 aa15.09■□□□□ 0.01
AC019117.1-202ENST00000439046 ZBTB22O15209 634 aa15.06■□□□□ 0
AC019117.1-202ENST00000439046 SLC4A2P04920 1241 aa15.06■□□□□ 0
AC019117.1-202ENST00000439046 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.05■□□□□ -0
AC019117.1-202ENST00000439046 MYCNP04198 464 aaPredicted RBP14.85□□□□□ -0.03
AC019117.1-202ENST00000439046 U3KPZ7 1027 aaPredicted RBP14.75□□□□□ -0.05
AC019117.1-202ENST00000439046 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.72□□□□□ -0.05
AC019117.1-202ENST00000439046 HNRNPUL2Q1KMD3 747 aaKnown RBP14.72□□□□□ -0.05
AC019117.1-202ENST00000439046 SAMD1Q6SPF0 538 aaPredicted RBP14.65□□□□□ -0.06
AC019117.1-202ENST00000439046 RNF39Q9H2S5 420 aa14.65□□□□□ -0.06
AC019117.1-202ENST00000439046 ATXN8OSP0DMR3 200 aa14.58□□□□□ -0.08
AC019117.1-202ENST00000439046 APLP2Q06481 763 aa14.56□□□□□ -0.08
AC019117.1-202ENST00000439046 C1QBPQ07021 282 aaKnown RBP14.52□□□□□ -0.09
AC019117.1-202ENST00000439046 ATF5Q9Y2D1 282 aaPredicted RBP14.35□□□□□ -0.11
AC019117.1-202ENST00000439046 CAPN15O75808 1086 aa14.3□□□□□ -0.12
AC019117.1-202ENST00000439046 SPINK5Q9NQ38 1064 aaPredicted RBP14.29□□□□□ -0.12
AC019117.1-202ENST00000439046 ZNF219Q9P2Y4 722 aaPredicted RBP14.29□□□□□ -0.12
AC019117.1-202ENST00000439046 TRHP20396 242 aaPredicted RBP14.25□□□□□ -0.13
AC019117.1-202ENST00000439046 CACNB1Q02641 598 aaPredicted RBP14.22□□□□□ -0.13
AC019117.1-202ENST00000439046 NISCHQ9Y2I1 1504 aa14.21□□□□□ -0.13
AC019117.1-202ENST00000439046 POLA2Q14181 598 aa14.03□□□□□ -0.16
AC019117.1-202ENST00000439046 ABCB7O75027 752 aa14□□□□□ -0.17
AC019117.1-202ENST00000439046 DSG3P32926 999 aa13.97□□□□□ -0.17
AC019117.1-202ENST00000439046 ZBTB12Q9Y330 459 aaPredicted RBP13.89□□□□□ -0.19
AC019117.1-202ENST00000439046 FBLN2P98095 1184 aa13.87□□□□□ -0.19
AC019117.1-202ENST00000439046 MKRN4PQ13434 485 aaPredicted RBP13.74□□□□□ -0.21
AC019117.1-202ENST00000439046 FKBP8Q14318 412 aa13.7□□□□□ -0.22
AC019117.1-202ENST00000439046 SPDYE4A6NLX3 237 aa13.57□□□□□ -0.24
AC019117.1-202ENST00000439046 OSCARQ8IYS5 282 aa13.55□□□□□ -0.24
AC019117.1-202ENST00000439046 SPDYE2BA6NHP3 402 aa13.48□□□□□ -0.25
AC019117.1-202ENST00000439046 SPDYE6P0CI01 402 aa13.48□□□□□ -0.25
AC019117.1-202ENST00000439046 SPDYE2Q495Y8 402 aa13.48□□□□□ -0.25
AC019117.1-202ENST00000439046 ZNF692Q9BU19 519 aaPredicted RBP13.44□□□□□ -0.26
AC019117.1-202ENST00000439046 RBM42Q9BTD8 480 aaKnown RBP13.4□□□□□ -0.26
AC019117.1-202ENST00000439046 SSUH2Q9Y2M2 353 aa13.34□□□□□ -0.27
AC019117.1-202ENST00000439046 PROM2Q8N271 834 aa13.31□□□□□ -0.28
AC019117.1-202ENST00000439046 PABPN1Q86U42 306 aaKnown RBP eCLIP13.25□□□□□ -0.29
AC019117.1-202ENST00000439046 FBXO3Q9UK99 471 aa13.24□□□□□ -0.29
AC019117.1-202ENST00000439046 AKT1S1Q96B36 256 aa13.22□□□□□ -0.29
AC019117.1-202ENST00000439046 STAG3Q9UJ98 1225 aa13.11□□□□□ -0.31
AC019117.1-202ENST00000439046 REM2Q8IYK8 340 aaPredicted RBP13.07□□□□□ -0.32
AC019117.1-202ENST00000439046 SPDYE1Q8NFV5 336 aaPredicted RBP13.06□□□□□ -0.32
AC019117.1-202ENST00000439046 VASPP50552 380 aaPredicted RBP13□□□□□ -0.33
AC019117.1-202ENST00000439046 CLEC11AQ9Y240 323 aa12.99□□□□□ -0.33
AC019117.1-202ENST00000439046 PITPNM1O00562 1244 aa12.91□□□□□ -0.34
AC019117.1-202ENST00000439046 PRR29P0C7W0 189 aa12.9□□□□□ -0.34
AC019117.1-202ENST00000439046 PLCD3Q8N3E9 789 aa12.9□□□□□ -0.34
AC019117.1-202ENST00000439046 PLEKHG5O94827 1062 aa12.89□□□□□ -0.35
AC019117.1-202ENST00000439046 MIER1Q8N108 512 aa12.87□□□□□ -0.35
AC019117.1-202ENST00000439046 IFNLR1Q8IU57 520 aaPredicted RBP12.79□□□□□ -0.36
AC019117.1-202ENST00000439046 KLHL34Q8N239 644 aa12.79□□□□□ -0.36
AC019117.1-202ENST00000439046 ZBTB47Q9UFB7 747 aaPredicted RBP12.78□□□□□ -0.36
AC019117.1-202ENST00000439046 AMER1Q5JTC6 1135 aaPredicted RBP12.75□□□□□ -0.37
AC019117.1-202ENST00000439046 CHRDL2Q6WN34 429 aa12.74□□□□□ -0.37
AC019117.1-202ENST00000439046 CREBZFQ9NS37 354 aa12.7□□□□□ -0.38
AC019117.1-202ENST00000439046 CCDC180Q9P1Z9 1646 aa12.7□□□□□ -0.38
AC019117.1-202ENST00000439046 SPOCK2Q92563 424 aa12.68□□□□□ -0.38
AC019117.1-202ENST00000439046 FXR2P51116 673 aaKnown RBP eCLIP12.64□□□□□ -0.39
AC019117.1-202ENST00000439046 RTN4Q9NQC3 1192 aaKnown RBP12.63□□□□□ -0.39
AC019117.1-202ENST00000439046 ABCC9O60706 1549 aa12.62□□□□□ -0.39
AC019117.1-202ENST00000439046 PRKAR2AP13861 404 aaKnown RBP12.61□□□□□ -0.39
AC019117.1-202ENST00000439046 CHADLQ6NUI6 762 aa12.61□□□□□ -0.39
AC019117.1-202ENST00000439046 NPM1P06748 294 aaKnown RBP eCLIP12.59□□□□□ -0.39
AC019117.1-202ENST00000439046 PIP4P2Q8N4L2 257 aa12.59□□□□□ -0.39
AC019117.1-202ENST00000439046 MNX1P50219 401 aaPredicted RBP12.55□□□□□ -0.4
AC019117.1-202ENST00000439046 FARP1Q9Y4F1 1045 aaPredicted RBP12.52□□□□□ -0.41
AC019117.1-202ENST00000439046 NUBP1P53384 320 aa12.47□□□□□ -0.41
AC019117.1-202ENST00000439046 CIZ1Q9ULV3 898 aaPredicted RBP12.47□□□□□ -0.41
AC019117.1-202ENST00000439046 FAM212AQ96EL1 285 aa12.46□□□□□ -0.41
AC019117.1-202ENST00000439046 GSE1Q14687 1217 aa12.44□□□□□ -0.42
AC019117.1-202ENST00000439046 DCAF8Q5TAQ9 597 aa12.42□□□□□ -0.42
AC019117.1-202ENST00000439046 PKD2Q13563 968 aa12.4□□□□□ -0.42
AC019117.1-202ENST00000439046 RASEFQ8IZ41 740 aa12.39□□□□□ -0.43
AC019117.1-202ENST00000439046 TRIM41Q8WV44 630 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 160.2 ms