RNA–Protein interactions for RNA: ENST00000438998.6

PSMG4-206, Transcript of proteasome assembly chaperone 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PSMG4, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMG4-206ENST00000438998 PUM2Q8TB72 1066 aaKnown RBP eCLIP22.46■■□□□ 1.191e-63■■■■■ 32.1
PSMG4-206ENST00000438998 FMR1Q06787 632 aaKnown RBP eCLIP30.25■■■□□ 2.431e-40■■■■■ 73.1
PSMG4-206ENST00000438998 DDX3XO00571 662 aaKnown RBP eCLIP25.09■■□□□ 1.611e-15■■■■□ 20.6
PSMG4-206ENST00000438998 NCBP2P52298 156 aaKnown RBP eCLIP22.47■■□□□ 1.195e-11■□□□□ 10
PSMG4-206ENST00000438998 YBX3P16989 372 aaKnown RBP eCLIP31.68■■■□□ 2.661e-10■□□□□ 8.4
PSMG4-206ENST00000438998 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP39.05■■■■□ 3.842e-10■■□□□ 11.8
PSMG4-206ENST00000438998 XRN2Q9H0D6 950 aaKnown RBP eCLIP28.58■■■□□ 2.176e-10■□□□□ 8.4
PSMG4-206ENST00000438998 UTP3Q9NQZ2 479 aaKnown RBP eCLIP26.06■■□□□ 1.761e-9■■■■■ 61.2
PSMG4-206ENST00000438998 U2AF2P26368 475 aaKnown RBP eCLIP27.31■■□□□ 1.961e-8■□□□□ 9
PSMG4-206ENST00000438998 HNRNPMP52272 730 aaKnown RBP eCLIP38.23■■■■□ 3.719e-8■■■□□ 14.6
PSMG4-206ENST00000438998 EFTUD2Q15029 972 aaKnown RBP eCLIP23.32■■□□□ 1.321e-7■■□□□ 13.1
PSMG4-206ENST00000438998 TIA1P31483 386 aaKnown RBP eCLIP22.61■■□□□ 1.212e-7■□□□□ 8.5
PSMG4-206ENST00000438998 NONOQ15233 471 aaKnown RBP eCLIP27.65■■■□□ 2.022e-7■■■□□ 17.7
PSMG4-206ENST00000438998 MATR3P43243 847 aaKnown RBP eCLIP26.72■■□□□ 1.874e-7■■■■□ 22
PSMG4-206ENST00000438998 ZC3H11AO75152 810 aaKnown RBP eCLIP26.84■■□□□ 1.895e-7■■■■□ 22.5
PSMG4-206ENST00000438998 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP37.18■■■■□ 3.545e-7■■■■□ 20.6
PSMG4-206ENST00000438998 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP20.48■□□□□ 0.876e-7■□□□□ 9.8
PSMG4-206ENST00000438998 RBFOX2O43251 390 aaKnown RBP eCLIP18.89■□□□□ 0.611e-6■■□□□ 12.7
PSMG4-206ENST00000438998 PTBP1P26599 531 aaKnown RBP eCLIP18.7■□□□□ 0.581e-6■■■■□ 26.2
PSMG4-206ENST00000438998 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP22.8■■□□□ 1.241e-6■■■□□ 15.6
PSMG4-206ENST00000438998 NKRFO15226 690 aaKnown RBP eCLIP28.04■■■□□ 2.082e-6■■■■□ 21.8
PSMG4-206ENST00000438998 CSTF2P33240 577 aaKnown RBP eCLIP23.83■■□□□ 1.412e-6■■■□□ 14.9
PSMG4-206ENST00000438998 TBRG4Q969Z0 631 aaKnown RBP eCLIP23.92■■□□□ 1.422e-6■■■■■ 27.5
PSMG4-206ENST00000438998 GRWD1Q9BQ67 446 aaKnown RBP eCLIP37.19■■■■□ 3.544e-6■■■■□ 23.5
PSMG4-206ENST00000438998 XPO5Q9HAV4 1204 aaKnown RBP eCLIP29.49■■■□□ 2.315e-6■■■□□ 17
PSMG4-206ENST00000438998 HNRNPCP07910 306 aaKnown RBP eCLIP18.14■□□□□ 0.496e-6■■■□□ 18.7
PSMG4-206ENST00000438998 DDX52Q9Y2R4 599 aaKnown RBP eCLIP28.89■■■□□ 2.227e-6■■■□□ 16.3
Retrieved 27 of 27 RNA–protein pairs in 7.5 ms