RNA–Protein interactions for RNA: ENST00000438117.2

AC008940.1-201, humanhuman

TSL 5 BASIC

Gene AC008940.1, Length 785 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008940.1-201ENST00000438117 NISCHQ9Y2I1 1504 aa28.64■■■□□ 2.17
AC008940.1-201ENST00000438117 CCDC180Q9P1Z9 1646 aa25.71■■□□□ 1.71
AC008940.1-201ENST00000438117 ABCC9O60706 1549 aa25.66■■□□□ 1.7
AC008940.1-201ENST00000438117 RB1CC1Q8TDY2 1594 aa24.46■■□□□ 1.51
AC008940.1-201ENST00000438117 NACADO15069 1562 aa24.31■■□□□ 1.48
AC008940.1-201ENST00000438117 DNAJC5BQ9UF47 199 aa24.1■■□□□ 1.45
AC008940.1-201ENST00000438117 DCAF8L2P0C7V8 631 aa24.06■■□□□ 1.44
AC008940.1-201ENST00000438117 MYO15BQ96JP2 1530 aa24.02■■□□□ 1.44
AC008940.1-201ENST00000438117 UNC13AQ9UPW8 1703 aa23.91■■□□□ 1.42
AC008940.1-201ENST00000438117 PABPN1Q86U42 306 aaKnown RBP eCLIP23.87■■□□□ 1.41
AC008940.1-201ENST00000438117 BICRAQ9NZM4 1560 aa23.76■■□□□ 1.39
AC008940.1-201ENST00000438117 ZCCHC6Q5VYS8 1495 aaKnown RBP23.74■■□□□ 1.39
AC008940.1-201ENST00000438117 DCAF1Q9Y4B6 1507 aa23.69■■□□□ 1.38
AC008940.1-201ENST00000438117 SHROOM4Q9ULL8 1493 aa23.49■■□□□ 1.35
AC008940.1-201ENST00000438117 SCRIBQ14160 1630 aa23.37■■□□□ 1.33
AC008940.1-201ENST00000438117 CC2D2AQ9P2K1 1620 aa23.21■■□□□ 1.31
AC008940.1-201ENST00000438117 EIF4G1Q04637 1599 aaKnown RBP23.17■■□□□ 1.3
AC008940.1-201ENST00000438117 CECR2Q9BXF3 1484 aa23.14■■□□□ 1.29
AC008940.1-201ENST00000438117 NCAPD3P42695 1498 aa22.45■■□□□ 1.18
AC008940.1-201ENST00000438117 ATAD2BQ9ULI0 1458 aa22.36■■□□□ 1.17
AC008940.1-201ENST00000438117 SMARCA4P51532 1647 aa22.33■■□□□ 1.17
AC008940.1-201ENST00000438117 SMARCA2P51531 1590 aa22.3■■□□□ 1.16
AC008940.1-201ENST00000438117 HMGXB3Q12766 1538 aa22.28■■□□□ 1.16
AC008940.1-201ENST00000438117 BAZ1AQ9NRL2 1556 aaPredicted RBP22.22■■□□□ 1.15
AC008940.1-201ENST00000438117 CUX2O14529 1486 aa22.18■■□□□ 1.14
AC008940.1-201ENST00000438117 ERCC6Q03468 1493 aa22.15■■□□□ 1.14
AC008940.1-201ENST00000438117 DNAJC5Q9H3Z4 198 aa22.15■■□□□ 1.14
AC008940.1-201ENST00000438117 PEG3Q9GZU2 1588 aa22.15■■□□□ 1.14
AC008940.1-201ENST00000438117 BAZ1BQ9UIG0 1483 aaKnown RBP22.12■■□□□ 1.13
AC008940.1-201ENST00000438117 NESP48681 1621 aa22.05■■□□□ 1.12
AC008940.1-201ENST00000438117 MROH2BQ7Z745 1585 aa22.04■■□□□ 1.12
AC008940.1-201ENST00000438117 LAMC3Q9Y6N6 1575 aa21.93■■□□□ 1.1
AC008940.1-201ENST00000438117 THOC2Q8NI27 1593 aaKnown RBP21.86■■□□□ 1.09
AC008940.1-201ENST00000438117 PDS5BQ9NTI5 1447 aa21.8■■□□□ 1.08
AC008940.1-201ENST00000438117 KIF21AQ7Z4S6 1674 aa21.77■■□□□ 1.08
AC008940.1-201ENST00000438117 WIZO95785 1651 aa21.76■■□□□ 1.07
AC008940.1-201ENST00000438117 CADPSQ9ULU8 1353 aa21.75■■□□□ 1.07
AC008940.1-201ENST00000438117 MRC2Q9UBG0 1479 aa21.6■■□□□ 1.05
AC008940.1-201ENST00000438117 RSF1Q96T23 1441 aaPredicted RBP21.59■■□□□ 1.05
AC008940.1-201ENST00000438117 WDR62O43379 1518 aa21.57■■□□□ 1.04
AC008940.1-201ENST00000438117 TOP2AP11388 1531 aaKnown RBP21.52■■□□□ 1.04
AC008940.1-201ENST00000438117 CFTRP13569 1480 aa21.52■■□□□ 1.03
AC008940.1-201ENST00000438117 CEP164Q9UPV0 1460 aa21.51■■□□□ 1.03
AC008940.1-201ENST00000438117 FANCD2Q9BXW9 1451 aa21.49■■□□□ 1.03
AC008940.1-201ENST00000438117 URB2Q14146 1524 aaKnown RBP21.31■■□□□ 1
AC008940.1-201ENST00000438117 PRDM2Q13029 1718 aa21.29■■□□□ 1
AC008940.1-201ENST00000438117 CCDC88BA6NC98 1476 aa21.26■□□□□ 0.99
AC008940.1-201ENST00000438117 OSCARQ8IYS5 282 aa21.13■□□□□ 0.97
AC008940.1-201ENST00000438117 IFT140Q96RY7 1462 aa21.1■□□□□ 0.97
AC008940.1-201ENST00000438117 TRIM41Q8WV44 630 aa21.1■□□□□ 0.97
AC008940.1-201ENST00000438117 TOPBP1Q92547 1522 aa21.09■□□□□ 0.97
AC008940.1-201ENST00000438117 ABCC8Q09428 1581 aa21.06■□□□□ 0.96
AC008940.1-201ENST00000438117 ZNF608Q9ULD9 1512 aaPredicted RBP21.04■□□□□ 0.96
AC008940.1-201ENST00000438117 DNMBPQ6XZF7 1577 aa21.01■□□□□ 0.95
AC008940.1-201ENST00000438117 EIF4G3O43432 1585 aaKnown RBP20.93■□□□□ 0.94
AC008940.1-201ENST00000438117 TARBP1Q13395 1621 aaKnown RBP20.91■□□□□ 0.94
AC008940.1-201ENST00000438117 POLA1P09884 1462 aaPredicted RBP20.87■□□□□ 0.93
AC008940.1-201ENST00000438117 RIMBP3CA6NJZ7 1639 aa20.86■□□□□ 0.93
AC008940.1-201ENST00000438117 RIMBP3BA6NNM3 1639 aa20.86■□□□□ 0.93
AC008940.1-201ENST00000438117 RIMBP3Q9UFD9 1639 aa20.86■□□□□ 0.93
AC008940.1-201ENST00000438117 AQRO60306 1485 aaKnown RBP eCLIP20.84■□□□□ 0.93
AC008940.1-201ENST00000438117 ARHGEF11O15085 1522 aa20.79■□□□□ 0.92
AC008940.1-201ENST00000438117 RAD54L2Q9Y4B4 1467 aa20.77■□□□□ 0.92
AC008940.1-201ENST00000438117 CHD1O14646 1710 aa20.77■□□□□ 0.92
AC008940.1-201ENST00000438117 SOGA1O94964 1423 aa20.76■□□□□ 0.91
AC008940.1-201ENST00000438117 WDR97A6NE52 1622 aa20.73■□□□□ 0.91
AC008940.1-201ENST00000438117 FGD5Q6ZNL6 1462 aa20.72■□□□□ 0.91
AC008940.1-201ENST00000438117 CUX1P39880 1505 aa20.71■□□□□ 0.91
AC008940.1-201ENST00000438117 TDRD9Q8NDG6 1382 aaKnown RBP20.71■□□□□ 0.91
AC008940.1-201ENST00000438117 FBLN2P98095 1184 aa20.66■□□□□ 0.9
AC008940.1-201ENST00000438117 SNAPC4Q5SXM2 1469 aa20.64■□□□□ 0.89
AC008940.1-201ENST00000438117 MAGI1Q96QZ7 1491 aaPredicted RBP20.62■□□□□ 0.89
AC008940.1-201ENST00000438117 CYB5RLQ6IPT4 315 aa20.61■□□□□ 0.89
AC008940.1-201ENST00000438117 GRIN2BQ13224 1484 aa20.6■□□□□ 0.89
AC008940.1-201ENST00000438117 ARAP1Q96P48 1450 aa20.59■□□□□ 0.89
AC008940.1-201ENST00000438117 CLASP1Q7Z460 1538 aa20.57■□□□□ 0.88
AC008940.1-201ENST00000438117 CHMP7Q8WUX9 453 aaPredicted RBP20.55■□□□□ 0.88
AC008940.1-201ENST00000438117 SUPT5HO00267 1087 aaKnown RBP20.54■□□□□ 0.88
AC008940.1-201ENST00000438117 SYNJ2O15056 1496 aa20.53■□□□□ 0.88
AC008940.1-201ENST00000438117 SYNJ1O43426 1573 aa20.53■□□□□ 0.88
AC008940.1-201ENST00000438117 ABCA10Q8WWZ4 1543 aa20.53■□□□□ 0.88
AC008940.1-201ENST00000438117 GAPVD1Q14C86 1478 aa20.51■□□□□ 0.87
AC008940.1-201ENST00000438117 PBRM1Q86U86 1689 aa20.5■□□□□ 0.87
AC008940.1-201ENST00000438117 ABCA5Q8WWZ7 1642 aa20.49■□□□□ 0.87
AC008940.1-201ENST00000438117 WRNQ14191 1432 aaPredicted RBP eCLIP20.42■□□□□ 0.86
AC008940.1-201ENST00000438117 TOP2BQ02880 1626 aa20.39■□□□□ 0.86
AC008940.1-201ENST00000438117 BIVM-ERCC5R4GMW8 1640 aa20.39■□□□□ 0.86
AC008940.1-201ENST00000438117 TRHP20396 242 aaPredicted RBP20.35■□□□□ 0.85
AC008940.1-201ENST00000438117 GRIN2AQ12879 1464 aa20.32■□□□□ 0.84
AC008940.1-201ENST00000438117 ADAMTS12P58397 1594 aa20.32■□□□□ 0.84
AC008940.1-201ENST00000438117 NUP160Q12769 1436 aa20.28■□□□□ 0.84
AC008940.1-201ENST00000438117 FHAD1B1AJZ9 1412 aa20.27■□□□□ 0.83
AC008940.1-201ENST00000438117 ERICH3Q5RHP9 1530 aa20.26■□□□□ 0.83
AC008940.1-201ENST00000438117 CEP170Q5SW79 1584 aa20.25■□□□□ 0.83
AC008940.1-201ENST00000438117 ERCC6L2Q5T890 1561 aa20.21■□□□□ 0.83
AC008940.1-201ENST00000438117 SHROOM2Q13796 1616 aa20.2■□□□□ 0.82
AC008940.1-201ENST00000438117 PRG4Q92954 1404 aaPredicted RBP20.05■□□□□ 0.8
AC008940.1-201ENST00000438117 JPH4Q96JJ6 628 aa20.05■□□□□ 0.8
AC008940.1-201ENST00000438117 RUSC2Q8N2Y8 1516 aa20.03■□□□□ 0.8
AC008940.1-201ENST00000438117 IGF1RP08069 1367 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms