RNA–Protein interactions for RNA: ENST00000438047.1

AC011899.2-202, humanhuman

TSL 1 (best) BASIC

Gene AC011899.2, Length 4,302 nt, Biotype antisense RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC011899.2-202ENST00000438047 NISCHQ9Y2I1 1504 aa27.55■■■□□ 2
AC011899.2-202ENST00000438047 DCAF8L2P0C7V8 631 aa27.47■■□□□ 1.99
AC011899.2-202ENST00000438047 SHROOM4Q9ULL8 1493 aa25.34■■□□□ 1.65
AC011899.2-202ENST00000438047 SUPT5HO00267 1087 aaKnown RBP25.24■■□□□ 1.63
AC011899.2-202ENST00000438047 ABCC9O60706 1549 aa24.31■■□□□ 1.48
AC011899.2-202ENST00000438047 EHMT2Q96KQ7 1210 aa24.11■■□□□ 1.45
AC011899.2-202ENST00000438047 PABPN1Q86U42 306 aaKnown RBP eCLIP23.86■■□□□ 1.41
AC011899.2-202ENST00000438047 FAM9AQ8IZU1 332 aaPredicted RBP23.73■■□□□ 1.39
AC011899.2-202ENST00000438047 TRIM41Q8WV44 630 aa23.45■■□□□ 1.34
AC011899.2-202ENST00000438047 RANGAP1P46060 587 aaPredicted RBP23.4■■□□□ 1.34
AC011899.2-202ENST00000438047 APLP2Q06481 763 aa23.38■■□□□ 1.33
AC011899.2-202ENST00000438047 ATP1B4Q9UN42 357 aaPredicted RBP23.14■■□□□ 1.3
AC011899.2-202ENST00000438047 UBTFP17480 764 aaKnown RBP23.11■■□□□ 1.29
AC011899.2-202ENST00000438047 TTBK1Q5TCY1 1321 aaPredicted RBP23.05■■□□□ 1.28
AC011899.2-202ENST00000438047 CCDC180Q9P1Z9 1646 aa22.9■■□□□ 1.26
AC011899.2-202ENST00000438047 SCRIBQ14160 1630 aa22.79■■□□□ 1.24
AC011899.2-202ENST00000438047 ZCCHC6Q5VYS8 1495 aaKnown RBP22.72■■□□□ 1.23
AC011899.2-202ENST00000438047 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.65■■□□□ 1.22
AC011899.2-202ENST00000438047 HNRNPUL2Q1KMD3 747 aaKnown RBP22.65■■□□□ 1.22
AC011899.2-202ENST00000438047 RB1CC1Q8TDY2 1594 aa22.59■■□□□ 1.21
AC011899.2-202ENST00000438047 FBLN2P98095 1184 aa22.55■■□□□ 1.2
AC011899.2-202ENST00000438047 CHIC1Q5VXU3 224 aa22.48■■□□□ 1.19
AC011899.2-202ENST00000438047 MYT1LQ9UL68 1186 aa22.41■■□□□ 1.18
AC011899.2-202ENST00000438047 NACADO15069 1562 aa22.37■■□□□ 1.17
AC011899.2-202ENST00000438047 PPARGC1BQ86YN6 1023 aaKnown RBP22.35■■□□□ 1.17
AC011899.2-202ENST00000438047 PCGF6Q9BYE7 350 aa22.3■■□□□ 1.16
AC011899.2-202ENST00000438047 LOC105371045A0A1W2PR82 267 aa22.29■■□□□ 1.16
AC011899.2-202ENST00000438047 ITGAEP38570 1179 aa22.12■■□□□ 1.13
AC011899.2-202ENST00000438047 CCER1Q8TC90 406 aaPredicted RBP21.99■■□□□ 1.11
AC011899.2-202ENST00000438047 P3H3Q8IVL6 736 aa21.93■■□□□ 1.1
AC011899.2-202ENST00000438047 CSRNP3Q8WYN3 585 aa21.9■■□□□ 1.1
AC011899.2-202ENST00000438047 ARID3CA6NKF2 412 aa21.89■■□□□ 1.09
AC011899.2-202ENST00000438047 DCAF1Q9Y4B6 1507 aa21.85■■□□□ 1.09
AC011899.2-202ENST00000438047 BAZ1BQ9UIG0 1483 aaKnown RBP21.83■■□□□ 1.09
AC011899.2-202ENST00000438047 RSF1Q96T23 1441 aaPredicted RBP21.81■■□□□ 1.08
AC011899.2-202ENST00000438047 CHMP7Q8WUX9 453 aaPredicted RBP21.77■■□□□ 1.08
AC011899.2-202ENST00000438047 CECR2Q9BXF3 1484 aa21.74■■□□□ 1.07
AC011899.2-202ENST00000438047 FAM50AQ14320 339 aaKnown RBP21.71■■□□□ 1.07
AC011899.2-202ENST00000438047 NPM1P06748 294 aaKnown RBP eCLIP21.71■■□□□ 1.07
AC011899.2-202ENST00000438047 ERCC6Q03468 1493 aa21.71■■□□□ 1.07
AC011899.2-202ENST00000438047 BAZ1AQ9NRL2 1556 aaPredicted RBP21.61■■□□□ 1.05
AC011899.2-202ENST00000438047 TRIM26Q12899 539 aaPredicted RBP21.6■■□□□ 1.05
AC011899.2-202ENST00000438047 CDK11AQ9UQ88 783 aaPredicted RBP21.56■■□□□ 1.04
AC011899.2-202ENST00000438047 ZNF777Q9ULD5 760 aaPredicted RBP21.51■■□□□ 1.03
AC011899.2-202ENST00000438047 ZEB1P37275 1124 aaPredicted RBP21.49■■□□□ 1.03
AC011899.2-202ENST00000438047 TRIM52Q96A61 297 aa21.48■■□□□ 1.03
AC011899.2-202ENST00000438047 MYO15BQ96JP2 1530 aa21.48■■□□□ 1.03
AC011899.2-202ENST00000438047 POLR3GLQ9BT43 218 aa21.41■■□□□ 1.02
AC011899.2-202ENST00000438047 WRNQ14191 1432 aaPredicted RBP eCLIP21.37■■□□□ 1.01
AC011899.2-202ENST00000438047 MROH2BQ7Z745 1585 aa21.35■■□□□ 1.01
AC011899.2-202ENST00000438047 PDS5BQ9NTI5 1447 aa21.3■■□□□ 1
AC011899.2-202ENST00000438047 ESF1Q9H501 851 aaKnown RBP21.3■■□□□ 1
AC011899.2-202ENST00000438047 SMARCA2P51531 1590 aa21.29■■□□□ 1
AC011899.2-202ENST00000438047 PLPPR3Q6T4P5 718 aa21.26■□□□□ 0.99
AC011899.2-202ENST00000438047 KCNH8Q96L42 1107 aa21.24■□□□□ 0.99
AC011899.2-202ENST00000438047 SLC4A1APQ9BWU0 796 aaKnown RBP21.2■□□□□ 0.98
AC011899.2-202ENST00000438047 KIF27Q86VH2 1401 aa21.19■□□□□ 0.98
AC011899.2-202ENST00000438047 CNGB1Q14028 1251 aaPredicted RBP21.18■□□□□ 0.98
AC011899.2-202ENST00000438047 BCANQ96GW7 911 aa21.17■□□□□ 0.98
AC011899.2-202ENST00000438047 CADPSQ9ULU8 1353 aa21.16■□□□□ 0.98
AC011899.2-202ENST00000438047 ATAD2BQ9ULI0 1458 aa21.16■□□□□ 0.98
AC011899.2-202ENST00000438047 NEUROD1Q13562 356 aa21.13■□□□□ 0.97
AC011899.2-202ENST00000438047 CCDC88BA6NC98 1476 aa21.12■□□□□ 0.97
AC011899.2-202ENST00000438047 ZNF326Q5BKZ1 582 aaKnown RBP21.12■□□□□ 0.97
AC011899.2-202ENST00000438047 PLEKHD1A6NEE1 506 aa21.1■□□□□ 0.97
AC011899.2-202ENST00000438047 TDRD9Q8NDG6 1382 aaKnown RBP21.08■□□□□ 0.96
AC011899.2-202ENST00000438047 TRHP20396 242 aaPredicted RBP21.08■□□□□ 0.96
AC011899.2-202ENST00000438047 MTUS2Q5JR59 1369 aa21.04■□□□□ 0.96
AC011899.2-202ENST00000438047 CUX2O14529 1486 aa21.04■□□□□ 0.96
AC011899.2-202ENST00000438047 TSPY4P0CV99 314 aa21.03■□□□□ 0.96
AC011899.2-202ENST00000438047 TSPY10P0CW01 314 aa21.03■□□□□ 0.96
AC011899.2-202ENST00000438047 CHIC2Q9UKJ5 165 aa21■□□□□ 0.95
AC011899.2-202ENST00000438047 STAG3Q9UJ98 1225 aa21■□□□□ 0.95
AC011899.2-202ENST00000438047 SOGA1O94964 1423 aa20.99■□□□□ 0.95
AC011899.2-202ENST00000438047 EEA1Q15075 1411 aa20.99■□□□□ 0.95
AC011899.2-202ENST00000438047 CHGAP10645 457 aaKnown RBP20.98■□□□□ 0.95
AC011899.2-202ENST00000438047 CLIP1P30622 1438 aa20.97■□□□□ 0.95
AC011899.2-202ENST00000438047 CARMIL1Q5VZK9 1371 aa20.96■□□□□ 0.95
AC011899.2-202ENST00000438047 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.96■□□□□ 0.95
AC011899.2-202ENST00000438047 WIZO95785 1651 aa20.92■□□□□ 0.94
AC011899.2-202ENST00000438047 DNAJC5BQ9UF47 199 aa20.89■□□□□ 0.94
AC011899.2-202ENST00000438047 SMARCA4P51532 1647 aa20.89■□□□□ 0.93
AC011899.2-202ENST00000438047 CEP164Q9UPV0 1460 aa20.86■□□□□ 0.93
AC011899.2-202ENST00000438047 EIF4G1Q04637 1599 aaKnown RBP20.86■□□□□ 0.93
AC011899.2-202ENST00000438047 PELP1Q8IZL8 1130 aaKnown RBP20.85■□□□□ 0.93
AC011899.2-202ENST00000438047 GOLGA3Q08378 1498 aa20.85■□□□□ 0.93
AC011899.2-202ENST00000438047 TOP2AP11388 1531 aaKnown RBP20.85■□□□□ 0.93
AC011899.2-202ENST00000438047 ARID4BQ4LE39 1312 aaPredicted RBP20.84■□□□□ 0.93
AC011899.2-202ENST00000438047 YTHDC1Q96MU7 727 aaKnown RBP20.81■□□□□ 0.92
AC011899.2-202ENST00000438047 FANCD2Q9BXW9 1451 aa20.8■□□□□ 0.92
AC011899.2-202ENST00000438047 CFDP1Q9UEE9 299 aaPredicted RBP20.8■□□□□ 0.92
AC011899.2-202ENST00000438047 NCAPD3P42695 1498 aa20.79■□□□□ 0.92
AC011899.2-202ENST00000438047 HRCP23327 699 aa20.75■□□□□ 0.91
AC011899.2-202ENST00000438047 ABCC8Q09428 1581 aa20.75■□□□□ 0.91
AC011899.2-202ENST00000438047 CENPBP07199 599 aaPredicted RBP20.74■□□□□ 0.91
AC011899.2-202ENST00000438047 OSCARQ8IYS5 282 aa20.73■□□□□ 0.91
AC011899.2-202ENST00000438047 CEP162Q5TB80 1403 aa20.7■□□□□ 0.9
AC011899.2-202ENST00000438047 CYB5RLQ6IPT4 315 aa20.7■□□□□ 0.9
AC011899.2-202ENST00000438047 RRP7BPQ9NSQ0 103 aa20.69■□□□□ 0.9
AC011899.2-202ENST00000438047 JPH4Q96JJ6 628 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 1065.6 ms