RNA–Protein interactions for RNA: ENST00000437398.5

SPECC1L-204, Transcript of sperm antigen with calponin homology and coiled-coil domains 1 like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPECC1L, Length 6,674 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPECC1L-204ENST00000437398 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.85□□□□□ -0.192e-7■■■■■ 93.2
SPECC1L-204ENST00000437398 ILF3Q12906 894 aaKnown RBP eCLIP11.15□□□□□ -0.622e-14■■■■■ 61
SPECC1L-204ENST00000437398 DDX3XO00571 662 aaKnown RBP eCLIP11.12□□□□□ -0.631e-12■■■■■ 56.7
SPECC1L-204ENST00000437398 HNRNPKP61978 463 aaKnown RBP eCLIP10.8□□□□□ -0.686e-8■■■■■ 45.4
SPECC1L-204ENST00000437398 NIPBLQ6KC79 2804 aaeCLIP6.65□□□□□ -1.342e-8■■■■■ 45.1
SPECC1L-204ENST00000437398 PCBP2Q15366 365 aaKnown RBP eCLIP11.02□□□□□ -0.655e-10■■■■■ 44.9
SPECC1L-204ENST00000437398 PTBP1P26599 531 aaKnown RBP eCLIP10.07□□□□□ -0.82e-10■■■■■ 42.2
SPECC1L-204ENST00000437398 UPF1Q92900 1129 aaKnown RBP eCLIP11.07□□□□□ -0.642e-7■■■■■ 37.9
SPECC1L-204ENST00000437398 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.94□□□□□ -0.661e-8■■■■■ 33.2
SPECC1L-204ENST00000437398 PABPC4Q13310 644 aaKnown RBP eCLIP12.38□□□□□ -0.434e-6■■■■■ 29.2
SPECC1L-204ENST00000437398 AKAP1Q92667 903 aaKnown RBP eCLIP10.9□□□□□ -0.664e-7■■■■■ 27.8
SPECC1L-204ENST00000437398 DDX6P26196 483 aaKnown RBP eCLIP11.07□□□□□ -0.643e-6■■■■□ 26.7
SPECC1L-204ENST00000437398 HNRNPCP07910 306 aaKnown RBP eCLIP11.92□□□□□ -0.57e-8■■■■□ 25.1
SPECC1L-204ENST00000437398 AQRO60306 1485 aaKnown RBP eCLIP14.08□□□□□ -0.156e-6■■■■□ 23.2
SPECC1L-204ENST00000437398 PPIGQ13427 754 aaKnown RBP eCLIP11.24□□□□□ -0.617e-7■■■■□ 22.6
SPECC1L-204ENST00000437398 TIA1P31483 386 aaKnown RBP eCLIP10.49□□□□□ -0.737e-8■■■■□ 22.5
SPECC1L-204ENST00000437398 FXR2P51116 673 aaKnown RBP eCLIP11.21□□□□□ -0.612e-6■■■■□ 22.4
SPECC1L-204ENST00000437398 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.06□□□□□ -0.642e-11■■■■□ 21.9
SPECC1L-204ENST00000437398 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.63□□□□□ -1.032e-6■■■■□ 20.9
SPECC1L-204ENST00000437398 PCBP1Q15365 356 aaKnown RBP eCLIP10.96□□□□□ -0.653e-7■■■■□ 20.8
SPECC1L-204ENST00000437398 EIF3HO15372 352 aaKnown RBP eCLIP11.49□□□□□ -0.574e-7■■■■□ 20.5
SPECC1L-204ENST00000437398 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.85□□□□□ -0.517e-7■■■■□ 19.9
SPECC1L-204ENST00000437398 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.52□□□□□ -0.411e-7■■■□□ 19.1
SPECC1L-204ENST00000437398 HLTFQ14527 1009 aaKnown RBP eCLIP12.73□□□□□ -0.371e-7■■■□□ 17.9
SPECC1L-204ENST00000437398 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.99□□□□□ -0.171e-6■■■□□ 17.8
SPECC1L-204ENST00000437398 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.94□□□□□ -0.57e-7■■■□□ 15.7
SPECC1L-204ENST00000437398 ZNF622Q969S3 477 aaKnown RBP eCLIP13.2□□□□□ -0.36e-8■■□□□ 14
SPECC1L-204ENST00000437398 SFPQP23246 707 aaKnown RBP eCLIP12.63□□□□□ -0.399e-7■■□□□ 14
SPECC1L-204ENST00000437398 GRSF1Q12849 480 aaKnown RBP eCLIP11.24□□□□□ -0.611e-8■■□□□ 13.6
SPECC1L-204ENST00000437398 MATR3P43243 847 aaKnown RBP eCLIP13.47□□□□□ -0.253e-6■■□□□ 12.9
SPECC1L-204ENST00000437398 YBX3P16989 372 aaKnown RBP eCLIP11.27□□□□□ -0.63e-9■■□□□ 12.4
SPECC1L-204ENST00000437398 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.23■□□□□ 0.031e-6■■□□□ 12.1
SPECC1L-204ENST00000437398 NCBP2P52298 156 aaKnown RBP eCLIP10.96□□□□□ -0.655e-9■□□□□ 10.6
SPECC1L-204ENST00000437398 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.5□□□□□ -0.571e-6■□□□□ 10.4
SPECC1L-204ENST00000437398 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.16□□□□□ -0.621e-13■□□□□ 9.5
Retrieved 35 of 35 RNA–protein pairs in 9.2 ms