RNA–Protein interactions for RNA: ENST00000437116.2

TAPBP-235, Transcript of TAP binding protein, humanhuman

TSL 1 (best)

Gene TAPBP, Length 1,239 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TAPBP-235ENST00000437116 NISCHQ9Y2I1 1504 aa45.39■■■■■ 4.86
TAPBP-235ENST00000437116 CCDC180Q9P1Z9 1646 aa40.64■■■■■ 4.1
TAPBP-235ENST00000437116 ABCC9O60706 1549 aa40.45■■■■■ 4.07
TAPBP-235ENST00000437116 RB1CC1Q8TDY2 1594 aa38.57■■■■□ 3.76
TAPBP-235ENST00000437116 NACADO15069 1562 aa38.33■■■■□ 3.73
TAPBP-235ENST00000437116 DCAF8L2P0C7V8 631 aa38.33■■■■□ 3.73
TAPBP-235ENST00000437116 MYO15BQ96JP2 1530 aa37.82■■■■□ 3.64
TAPBP-235ENST00000437116 UNC13AQ9UPW8 1703 aa37.77■■■■□ 3.64
TAPBP-235ENST00000437116 PABPN1Q86U42 306 aaKnown RBP eCLIP37.71■■■■□ 3.63
TAPBP-235ENST00000437116 DNAJC5BQ9UF47 199 aa37.69■■■■□ 3.62
TAPBP-235ENST00000437116 ZCCHC6Q5VYS8 1495 aaKnown RBP37.66■■■■□ 3.62
TAPBP-235ENST00000437116 DCAF1Q9Y4B6 1507 aa37.45■■■■□ 3.59
TAPBP-235ENST00000437116 BICRAQ9NZM4 1560 aa37.42■■■■□ 3.58
TAPBP-235ENST00000437116 SCRIBQ14160 1630 aa37.12■■■■□ 3.53
TAPBP-235ENST00000437116 SHROOM4Q9ULL8 1493 aa36.86■■■■□ 3.49
TAPBP-235ENST00000437116 CC2D2AQ9P2K1 1620 aa36.54■■■■□ 3.44
TAPBP-235ENST00000437116 EIF4G1Q04637 1599 aaKnown RBP36.49■■■■□ 3.43
TAPBP-235ENST00000437116 CECR2Q9BXF3 1484 aa36.37■■■■□ 3.41
TAPBP-235ENST00000437116 SMARCA4P51532 1647 aa35.39■■■■□ 3.26
TAPBP-235ENST00000437116 NCAPD3P42695 1498 aa35.36■■■■□ 3.25
TAPBP-235ENST00000437116 ATAD2BQ9ULI0 1458 aa35.33■■■■□ 3.25
TAPBP-235ENST00000437116 SMARCA2P51531 1590 aa35.24■■■■□ 3.23
TAPBP-235ENST00000437116 BAZ1AQ9NRL2 1556 aaPredicted RBP35.22■■■■□ 3.23
TAPBP-235ENST00000437116 HMGXB3Q12766 1538 aa35.15■■■■□ 3.22
TAPBP-235ENST00000437116 BAZ1BQ9UIG0 1483 aaKnown RBP35.03■■■■□ 3.2
TAPBP-235ENST00000437116 MROH2BQ7Z745 1585 aa35.01■■■■□ 3.2
TAPBP-235ENST00000437116 PEG3Q9GZU2 1588 aa34.97■■■■□ 3.19
TAPBP-235ENST00000437116 ERCC6Q03468 1493 aa34.9■■■■□ 3.18
TAPBP-235ENST00000437116 NESP48681 1621 aa34.82■■■■□ 3.16
TAPBP-235ENST00000437116 CUX2O14529 1486 aa34.69■■■■□ 3.14
TAPBP-235ENST00000437116 WIZO95785 1651 aa34.64■■■■□ 3.14
TAPBP-235ENST00000437116 LAMC3Q9Y6N6 1575 aa34.57■■■■□ 3.12
TAPBP-235ENST00000437116 KIF21AQ7Z4S6 1674 aa34.41■■■■□ 3.1
TAPBP-235ENST00000437116 DNAJC5Q9H3Z4 198 aa34.39■■■■□ 3.1
TAPBP-235ENST00000437116 THOC2Q8NI27 1593 aaKnown RBP34.39■■■■□ 3.1
TAPBP-235ENST00000437116 RSF1Q96T23 1441 aaPredicted RBP34.35■■■■□ 3.09
TAPBP-235ENST00000437116 PDS5BQ9NTI5 1447 aa34.35■■■■□ 3.09
TAPBP-235ENST00000437116 CADPSQ9ULU8 1353 aa34.33■■■■□ 3.09
TAPBP-235ENST00000437116 TOP2AP11388 1531 aaKnown RBP34.17■■■■□ 3.06
TAPBP-235ENST00000437116 MRC2Q9UBG0 1479 aa34.06■■■■□ 3.04
TAPBP-235ENST00000437116 CEP164Q9UPV0 1460 aa33.98■■■■□ 3.03
TAPBP-235ENST00000437116 CFTRP13569 1480 aa33.97■■■■□ 3.03
TAPBP-235ENST00000437116 FANCD2Q9BXW9 1451 aa33.96■■■■□ 3.03
TAPBP-235ENST00000437116 WDR62O43379 1518 aa33.95■■■■□ 3.03
TAPBP-235ENST00000437116 CCDC88BA6NC98 1476 aa33.79■■■■□ 3
TAPBP-235ENST00000437116 PRDM2Q13029 1718 aa33.75■■■□□ 2.99
TAPBP-235ENST00000437116 URB2Q14146 1524 aaKnown RBP33.68■■■□□ 2.98
TAPBP-235ENST00000437116 TOPBP1Q92547 1522 aa33.35■■■□□ 2.93
TAPBP-235ENST00000437116 IFT140Q96RY7 1462 aa33.27■■■□□ 2.92
TAPBP-235ENST00000437116 ABCC8Q09428 1581 aa33.26■■■□□ 2.91
TAPBP-235ENST00000437116 DNMBPQ6XZF7 1577 aa33.26■■■□□ 2.91
TAPBP-235ENST00000437116 ZNF608Q9ULD9 1512 aaPredicted RBP33.23■■■□□ 2.91
TAPBP-235ENST00000437116 OSCARQ8IYS5 282 aa33.18■■■□□ 2.9
TAPBP-235ENST00000437116 SUPT5HO00267 1087 aaKnown RBP33.12■■■□□ 2.89
TAPBP-235ENST00000437116 TRIM41Q8WV44 630 aa33.1■■■□□ 2.89
TAPBP-235ENST00000437116 EIF4G3O43432 1585 aaKnown RBP33.07■■■□□ 2.88
TAPBP-235ENST00000437116 TARBP1Q13395 1621 aaKnown RBP33.03■■■□□ 2.88
TAPBP-235ENST00000437116 POLA1P09884 1462 aaPredicted RBP33.02■■■□□ 2.88
TAPBP-235ENST00000437116 AQRO60306 1485 aaKnown RBP eCLIP32.97■■■□□ 2.877e-7■■■■□ 20
TAPBP-235ENST00000437116 RAD54L2Q9Y4B4 1467 aa32.93■■■□□ 2.86
TAPBP-235ENST00000437116 SOGA1O94964 1423 aa32.88■■■□□ 2.85
TAPBP-235ENST00000437116 CUX1P39880 1505 aa32.87■■■□□ 2.85
TAPBP-235ENST00000437116 FGD5Q6ZNL6 1462 aa32.87■■■□□ 2.85
TAPBP-235ENST00000437116 CHD1O14646 1710 aa32.82■■■□□ 2.85
TAPBP-235ENST00000437116 TDRD9Q8NDG6 1382 aaKnown RBP32.81■■■□□ 2.84
TAPBP-235ENST00000437116 RIMBP3CA6NJZ7 1639 aa32.76■■■□□ 2.83
TAPBP-235ENST00000437116 RIMBP3BA6NNM3 1639 aa32.76■■■□□ 2.83
TAPBP-235ENST00000437116 RIMBP3Q9UFD9 1639 aa32.76■■■□□ 2.83
TAPBP-235ENST00000437116 FBLN2P98095 1184 aa32.75■■■□□ 2.83
TAPBP-235ENST00000437116 WDR97A6NE52 1622 aa32.66■■■□□ 2.82
TAPBP-235ENST00000437116 ARHGEF11O15085 1522 aa32.65■■■□□ 2.82
TAPBP-235ENST00000437116 SNAPC4Q5SXM2 1469 aa32.64■■■□□ 2.82
TAPBP-235ENST00000437116 GRIN2BQ13224 1484 aa32.55■■■□□ 2.8
TAPBP-235ENST00000437116 MAGI1Q96QZ7 1491 aaPredicted RBP32.52■■■□□ 2.8
TAPBP-235ENST00000437116 PBRM1Q86U86 1689 aa32.52■■■□□ 2.8
TAPBP-235ENST00000437116 CHMP7Q8WUX9 453 aaPredicted RBP32.5■■■□□ 2.79
TAPBP-235ENST00000437116 GAPVD1Q14C86 1478 aa32.49■■■□□ 2.79
TAPBP-235ENST00000437116 ABCA10Q8WWZ4 1543 aa32.47■■■□□ 2.79
TAPBP-235ENST00000437116 ABCA5Q8WWZ7 1642 aa32.43■■■□□ 2.78
TAPBP-235ENST00000437116 BIVM-ERCC5R4GMW8 1640 aa32.42■■■□□ 2.78
TAPBP-235ENST00000437116 CYB5RLQ6IPT4 315 aa32.42■■■□□ 2.78
TAPBP-235ENST00000437116 WRNQ14191 1432 aaPredicted RBP eCLIP32.42■■■□□ 2.78
TAPBP-235ENST00000437116 SYNJ2O15056 1496 aa32.42■■■□□ 2.78
TAPBP-235ENST00000437116 SYNJ1O43426 1573 aa32.41■■■□□ 2.78
TAPBP-235ENST00000437116 TOP2BQ02880 1626 aa32.4■■■□□ 2.78
TAPBP-235ENST00000437116 CLASP1Q7Z460 1538 aa32.37■■■□□ 2.77
TAPBP-235ENST00000437116 ARAP1Q96P48 1450 aa32.35■■■□□ 2.77
TAPBP-235ENST00000437116 ADAMTS12P58397 1594 aa32.18■■■□□ 2.74
TAPBP-235ENST00000437116 GRIN2AQ12879 1464 aa32.14■■■□□ 2.74
TAPBP-235ENST00000437116 ERICH3Q5RHP9 1530 aa32.07■■■□□ 2.72
TAPBP-235ENST00000437116 FHAD1B1AJZ9 1412 aa32.07■■■□□ 2.72
TAPBP-235ENST00000437116 CEP170Q5SW79 1584 aa32.03■■■□□ 2.72
TAPBP-235ENST00000437116 TRHP20396 242 aaPredicted RBP32.02■■■□□ 2.72
TAPBP-235ENST00000437116 NUP160Q12769 1436 aa32■■■□□ 2.71
TAPBP-235ENST00000437116 ERCC6L2Q5T890 1561 aa31.94■■■□□ 2.7
TAPBP-235ENST00000437116 SHROOM2Q13796 1616 aa31.85■■■□□ 2.69
TAPBP-235ENST00000437116 KIF27Q86VH2 1401 aa31.77■■■□□ 2.68
TAPBP-235ENST00000437116 IGF1RP08069 1367 aa31.72■■■□□ 2.67
TAPBP-235ENST00000437116 PRG4Q92954 1404 aaPredicted RBP31.72■■■□□ 2.67
TAPBP-235ENST00000437116 RUSC2Q8N2Y8 1516 aa31.71■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms