RNA–Protein interactions for RNA: ENST00000437039.1

AC009948.2-201, humanhuman

BASIC

Gene AC009948.2, Length 713 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009948.2-201ENST00000437039 NISCHQ9Y2I1 1504 aa26.3■■□□□ 1.8
AC009948.2-201ENST00000437039 ABCC9O60706 1549 aa24.66■■□□□ 1.54
AC009948.2-201ENST00000437039 DNAJC5BQ9UF47 199 aa23.89■■□□□ 1.41
AC009948.2-201ENST00000437039 CCDC180Q9P1Z9 1646 aa23.8■■□□□ 1.4
AC009948.2-201ENST00000437039 RB1CC1Q8TDY2 1594 aa23.04■■□□□ 1.28
AC009948.2-201ENST00000437039 PABPN1Q86U42 306 aaKnown RBP eCLIP22.88■■□□□ 1.25
AC009948.2-201ENST00000437039 NACADO15069 1562 aa22.72■■□□□ 1.23
AC009948.2-201ENST00000437039 BICRAQ9NZM4 1560 aa22.5■■□□□ 1.19
AC009948.2-201ENST00000437039 DCAF8L2P0C7V8 631 aa22.5■■□□□ 1.19
AC009948.2-201ENST00000437039 UNC13AQ9UPW8 1703 aa22.48■■□□□ 1.19
AC009948.2-201ENST00000437039 DNAJC5Q9H3Z4 198 aa22.37■■□□□ 1.17
AC009948.2-201ENST00000437039 CECR2Q9BXF3 1484 aa22.27■■□□□ 1.16
AC009948.2-201ENST00000437039 CC2D2AQ9P2K1 1620 aa22.18■■□□□ 1.14
AC009948.2-201ENST00000437039 MYO15BQ96JP2 1530 aa22.18■■□□□ 1.14
AC009948.2-201ENST00000437039 SHROOM4Q9ULL8 1493 aa22.02■■□□□ 1.12
AC009948.2-201ENST00000437039 EIF4G1Q04637 1599 aaKnown RBP21.97■■□□□ 1.11
AC009948.2-201ENST00000437039 SCRIBQ14160 1630 aa21.73■■□□□ 1.07
AC009948.2-201ENST00000437039 ZCCHC6Q5VYS8 1495 aaKnown RBP21.65■■□□□ 1.06
AC009948.2-201ENST00000437039 DCAF1Q9Y4B6 1507 aa21.64■■□□□ 1.05
AC009948.2-201ENST00000437039 CUX2O14529 1486 aa21.49■■□□□ 1.03
AC009948.2-201ENST00000437039 ERCC6Q03468 1493 aa21.26■□□□□ 0.99
AC009948.2-201ENST00000437039 TRIM41Q8WV44 630 aa21.07■□□□□ 0.96
AC009948.2-201ENST00000437039 NCAPD3P42695 1498 aa21.06■□□□□ 0.96
AC009948.2-201ENST00000437039 NESP48681 1621 aa21■□□□□ 0.95
AC009948.2-201ENST00000437039 ATAD2BQ9ULI0 1458 aa20.9■□□□□ 0.94
AC009948.2-201ENST00000437039 THOC2Q8NI27 1593 aaKnown RBP20.87■□□□□ 0.93
AC009948.2-201ENST00000437039 HMGXB3Q12766 1538 aa20.78■□□□□ 0.92
AC009948.2-201ENST00000437039 SMARCA2P51531 1590 aa20.72■□□□□ 0.91
AC009948.2-201ENST00000437039 SMARCA4P51532 1647 aa20.64■□□□□ 0.89
AC009948.2-201ENST00000437039 LAMC3Q9Y6N6 1575 aa20.61■□□□□ 0.89
AC009948.2-201ENST00000437039 BAZ1BQ9UIG0 1483 aaKnown RBP20.61■□□□□ 0.89
AC009948.2-201ENST00000437039 KIF21AQ7Z4S6 1674 aa20.58■□□□□ 0.88
AC009948.2-201ENST00000437039 PDS5BQ9NTI5 1447 aa20.54■□□□□ 0.88
AC009948.2-201ENST00000437039 PEG3Q9GZU2 1588 aa20.45■□□□□ 0.86
AC009948.2-201ENST00000437039 MRC2Q9UBG0 1479 aa20.44■□□□□ 0.86
AC009948.2-201ENST00000437039 WDR62O43379 1518 aa20.43■□□□□ 0.86
AC009948.2-201ENST00000437039 BAZ1AQ9NRL2 1556 aaPredicted RBP20.42■□□□□ 0.86
AC009948.2-201ENST00000437039 OSCARQ8IYS5 282 aa20.39■□□□□ 0.85
AC009948.2-201ENST00000437039 CADPSQ9ULU8 1353 aa20.37■□□□□ 0.85
AC009948.2-201ENST00000437039 MROH2BQ7Z745 1585 aa20.29■□□□□ 0.84
AC009948.2-201ENST00000437039 RIMBP3CA6NJZ7 1639 aa20.2■□□□□ 0.82
AC009948.2-201ENST00000437039 RIMBP3BA6NNM3 1639 aa20.2■□□□□ 0.82
AC009948.2-201ENST00000437039 RIMBP3Q9UFD9 1639 aa20.2■□□□□ 0.82
AC009948.2-201ENST00000437039 CEP164Q9UPV0 1460 aa20.19■□□□□ 0.82
AC009948.2-201ENST00000437039 FANCD2Q9BXW9 1451 aa20.14■□□□□ 0.81
AC009948.2-201ENST00000437039 ARHGEF11O15085 1522 aa20.1■□□□□ 0.81
AC009948.2-201ENST00000437039 AEBP2Q6ZN18 517 aaPredicted RBP20.07■□□□□ 0.8
AC009948.2-201ENST00000437039 URB2Q14146 1524 aaKnown RBP20.06■□□□□ 0.8
AC009948.2-201ENST00000437039 CYB5RLQ6IPT4 315 aa20■□□□□ 0.79
AC009948.2-201ENST00000437039 CFTRP13569 1480 aa19.99■□□□□ 0.79
AC009948.2-201ENST00000437039 TRHP20396 242 aaPredicted RBP19.97■□□□□ 0.79
AC009948.2-201ENST00000437039 WIZO95785 1651 aa19.96■□□□□ 0.79
AC009948.2-201ENST00000437039 ZNF608Q9ULD9 1512 aaPredicted RBP19.95■□□□□ 0.78
AC009948.2-201ENST00000437039 ARAP1Q96P48 1450 aa19.88■□□□□ 0.77
AC009948.2-201ENST00000437039 IFT140Q96RY7 1462 aa19.83■□□□□ 0.76
AC009948.2-201ENST00000437039 EIF4G3O43432 1585 aaKnown RBP19.71■□□□□ 0.75
AC009948.2-201ENST00000437039 RSF1Q96T23 1441 aaPredicted RBP19.7■□□□□ 0.74
AC009948.2-201ENST00000437039 TOPBP1Q92547 1522 aa19.68■□□□□ 0.74
AC009948.2-201ENST00000437039 AQRO60306 1485 aaKnown RBP eCLIP19.66■□□□□ 0.74
AC009948.2-201ENST00000437039 TOP2AP11388 1531 aaKnown RBP19.66■□□□□ 0.74
AC009948.2-201ENST00000437039 CHD1O14646 1710 aa19.65■□□□□ 0.74
AC009948.2-201ENST00000437039 FBLN2P98095 1184 aa19.62■□□□□ 0.73
AC009948.2-201ENST00000437039 CHIC1Q5VXU3 224 aa19.57■□□□□ 0.72
AC009948.2-201ENST00000437039 TARBP1Q13395 1621 aaKnown RBP19.54■□□□□ 0.72
AC009948.2-201ENST00000437039 PRDM2Q13029 1718 aa19.54■□□□□ 0.72
AC009948.2-201ENST00000437039 DNMBPQ6XZF7 1577 aa19.5■□□□□ 0.71
AC009948.2-201ENST00000437039 CLASP1Q7Z460 1538 aa19.5■□□□□ 0.71
AC009948.2-201ENST00000437039 CCDC88BA6NC98 1476 aa19.49■□□□□ 0.71
AC009948.2-201ENST00000437039 ABCC8Q09428 1581 aa19.49■□□□□ 0.71
AC009948.2-201ENST00000437039 POLA1P09884 1462 aaPredicted RBP19.45■□□□□ 0.7
AC009948.2-201ENST00000437039 TDRD9Q8NDG6 1382 aaKnown RBP19.43■□□□□ 0.7
AC009948.2-201ENST00000437039 RAD54L2Q9Y4B4 1467 aa19.42■□□□□ 0.7
AC009948.2-201ENST00000437039 SNAPC4Q5SXM2 1469 aa19.41■□□□□ 0.7
AC009948.2-201ENST00000437039 GAPVD1Q14C86 1478 aa19.35■□□□□ 0.69
AC009948.2-201ENST00000437039 CHMP7Q8WUX9 453 aaPredicted RBP19.34■□□□□ 0.69
AC009948.2-201ENST00000437039 SYNJ1O43426 1573 aa19.34■□□□□ 0.69
AC009948.2-201ENST00000437039 SOGA1O94964 1423 aa19.33■□□□□ 0.68
AC009948.2-201ENST00000437039 MAGI1Q96QZ7 1491 aaPredicted RBP19.28■□□□□ 0.68
AC009948.2-201ENST00000437039 SYNJ2O15056 1496 aa19.25■□□□□ 0.67
AC009948.2-201ENST00000437039 ILDR1Q86SU0 546 aaPredicted RBP19.23■□□□□ 0.67
AC009948.2-201ENST00000437039 GRIN2BQ13224 1484 aa19.22■□□□□ 0.67
AC009948.2-201ENST00000437039 FGD5Q6ZNL6 1462 aa19.21■□□□□ 0.67
AC009948.2-201ENST00000437039 ERCC6L2Q5T890 1561 aa19.2■□□□□ 0.66
AC009948.2-201ENST00000437039 WDR97A6NE52 1622 aa19.2■□□□□ 0.66
AC009948.2-201ENST00000437039 CUX1P39880 1505 aa19.1■□□□□ 0.65
AC009948.2-201ENST00000437039 KDM4FA0A1W2PPD8 638 aa19.08■□□□□ 0.64
AC009948.2-201ENST00000437039 CEP170Q5SW79 1584 aa19.02■□□□□ 0.64
AC009948.2-201ENST00000437039 KIF13AQ9H1H9 1805 aa19.02■□□□□ 0.63
AC009948.2-201ENST00000437039 PBRM1Q86U86 1689 aa19.01■□□□□ 0.63
AC009948.2-201ENST00000437039 GRIN2AQ12879 1464 aa18.99■□□□□ 0.63
AC009948.2-201ENST00000437039 NUP160Q12769 1436 aa18.98■□□□□ 0.63
AC009948.2-201ENST00000437039 ABCA5Q8WWZ7 1642 aa18.96■□□□□ 0.63
AC009948.2-201ENST00000437039 FAM69CQ0P6D2 419 aa18.94■□□□□ 0.62
AC009948.2-201ENST00000437039 ABCA10Q8WWZ4 1543 aa18.94■□□□□ 0.62
AC009948.2-201ENST00000437039 SHROOM2Q13796 1616 aa18.92■□□□□ 0.62
AC009948.2-201ENST00000437039 ABCC10Q5T3U5 1492 aa18.92■□□□□ 0.62
AC009948.2-201ENST00000437039 ADAMTS12P58397 1594 aa18.88■□□□□ 0.61
AC009948.2-201ENST00000437039 PRG4Q92954 1404 aaPredicted RBP18.84■□□□□ 0.61
AC009948.2-201ENST00000437039 DIP2BQ9P265 1576 aa18.83■□□□□ 0.6
AC009948.2-201ENST00000437039 KDM6BO15054 1643 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms