RNA–Protein interactions for RNA: ENST00000436883.5

PTPA-220, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 4 BASIC

Gene PTPA, Length 532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-220ENST00000436883 NISCHQ9Y2I1 1504 aa38.89■■■■□ 3.82
PTPA-220ENST00000436883 ABCC9O60706 1549 aa35.05■■■■□ 3.2
PTPA-220ENST00000436883 CCDC180Q9P1Z9 1646 aa34.84■■■■□ 3.17
PTPA-220ENST00000436883 RB1CC1Q8TDY2 1594 aa33.26■■■□□ 2.92
PTPA-220ENST00000436883 DCAF8L2P0C7V8 631 aa33.11■■■□□ 2.89
PTPA-220ENST00000436883 NACADO15069 1562 aa33■■■□□ 2.87
PTPA-220ENST00000436883 DNAJC5BQ9UF47 199 aa32.95■■■□□ 2.87
PTPA-220ENST00000436883 PABPN1Q86U42 306 aaKnown RBP eCLIP32.7■■■□□ 2.83
PTPA-220ENST00000436883 MYO15BQ96JP2 1530 aa32.46■■■□□ 2.79
PTPA-220ENST00000436883 UNC13AQ9UPW8 1703 aa32.46■■■□□ 2.79
PTPA-220ENST00000436883 BICRAQ9NZM4 1560 aa32.25■■■□□ 2.75
PTPA-220ENST00000436883 ZCCHC6Q5VYS8 1495 aaKnown RBP32.17■■■□□ 2.74
PTPA-220ENST00000436883 DCAF1Q9Y4B6 1507 aa32.05■■■□□ 2.72
PTPA-220ENST00000436883 SCRIBQ14160 1630 aa31.85■■■□□ 2.69
PTPA-220ENST00000436883 SHROOM4Q9ULL8 1493 aa31.77■■■□□ 2.68
PTPA-220ENST00000436883 CC2D2AQ9P2K1 1620 aa31.6■■■□□ 2.65
PTPA-220ENST00000436883 CECR2Q9BXF3 1484 aa31.56■■■□□ 2.64
PTPA-220ENST00000436883 EIF4G1Q04637 1599 aaKnown RBP31.5■■■□□ 2.63
PTPA-220ENST00000436883 NCAPD3P42695 1498 aa30.49■■■□□ 2.47
PTPA-220ENST00000436883 ATAD2BQ9ULI0 1458 aa30.4■■■□□ 2.46
PTPA-220ENST00000436883 SMARCA4P51532 1647 aa30.33■■■□□ 2.45
PTPA-220ENST00000436883 SMARCA2P51531 1590 aa30.3■■■□□ 2.44
PTPA-220ENST00000436883 DNAJC5Q9H3Z4 198 aa30.3■■■□□ 2.44
PTPA-220ENST00000436883 ERCC6Q03468 1493 aa30.28■■■□□ 2.44
PTPA-220ENST00000436883 HMGXB3Q12766 1538 aa30.21■■■□□ 2.43
PTPA-220ENST00000436883 BAZ1AQ9NRL2 1556 aaPredicted RBP30.18■■■□□ 2.42
PTPA-220ENST00000436883 CUX2O14529 1486 aa30.16■■■□□ 2.42
PTPA-220ENST00000436883 BAZ1BQ9UIG0 1483 aaKnown RBP30.13■■■□□ 2.41
PTPA-220ENST00000436883 NESP48681 1621 aa30.07■■■□□ 2.4
PTPA-220ENST00000436883 MROH2BQ7Z745 1585 aa29.98■■■□□ 2.39
PTPA-220ENST00000436883 PEG3Q9GZU2 1588 aa29.98■■■□□ 2.39
PTPA-220ENST00000436883 LAMC3Q9Y6N6 1575 aa29.79■■■□□ 2.36
PTPA-220ENST00000436883 PDS5BQ9NTI5 1447 aa29.7■■■□□ 2.34
PTPA-220ENST00000436883 THOC2Q8NI27 1593 aaKnown RBP29.69■■■□□ 2.34
PTPA-220ENST00000436883 KIF21AQ7Z4S6 1674 aa29.63■■■□□ 2.33
PTPA-220ENST00000436883 WIZO95785 1651 aa29.62■■■□□ 2.33
PTPA-220ENST00000436883 CADPSQ9ULU8 1353 aa29.61■■■□□ 2.33
PTPA-220ENST00000436883 MRC2Q9UBG0 1479 aa29.41■■■□□ 2.3
PTPA-220ENST00000436883 RSF1Q96T23 1441 aaPredicted RBP29.35■■■□□ 2.29
PTPA-220ENST00000436883 CEP164Q9UPV0 1460 aa29.29■■■□□ 2.28
PTPA-220ENST00000436883 WDR62O43379 1518 aa29.29■■■□□ 2.28
PTPA-220ENST00000436883 FANCD2Q9BXW9 1451 aa29.26■■■□□ 2.27
PTPA-220ENST00000436883 CFTRP13569 1480 aa29.21■■■□□ 2.27
PTPA-220ENST00000436883 TOP2AP11388 1531 aaKnown RBP29.2■■■□□ 2.27
PTPA-220ENST00000436883 TRIM41Q8WV44 630 aa29.06■■■□□ 2.24
PTPA-220ENST00000436883 URB2Q14146 1524 aaKnown RBP28.99■■■□□ 2.23
PTPA-220ENST00000436883 CCDC88BA6NC98 1476 aa28.94■■■□□ 2.22
PTPA-220ENST00000436883 OSCARQ8IYS5 282 aa28.9■■■□□ 2.22
PTPA-220ENST00000436883 PRDM2Q13029 1718 aa28.85■■■□□ 2.21
PTPA-220ENST00000436883 IFT140Q96RY7 1462 aa28.7■■■□□ 2.18
PTPA-220ENST00000436883 TOPBP1Q92547 1522 aa28.69■■■□□ 2.18
PTPA-220ENST00000436883 ZNF608Q9ULD9 1512 aaPredicted RBP28.67■■■□□ 2.18
PTPA-220ENST00000436883 ABCC8Q09428 1581 aa28.62■■■□□ 2.17
PTPA-220ENST00000436883 DNMBPQ6XZF7 1577 aa28.55■■■□□ 2.16
PTPA-220ENST00000436883 EIF4G3O43432 1585 aaKnown RBP28.45■■■□□ 2.15
PTPA-220ENST00000436883 AQRO60306 1485 aaKnown RBP eCLIP28.45■■■□□ 2.143e-7■■■■■ 30.5
PTPA-220ENST00000436883 RIMBP3CA6NJZ7 1639 aa28.42■■■□□ 2.14
PTPA-220ENST00000436883 RIMBP3BA6NNM3 1639 aa28.42■■■□□ 2.14
PTPA-220ENST00000436883 RIMBP3Q9UFD9 1639 aa28.42■■■□□ 2.14
PTPA-220ENST00000436883 FBLN2P98095 1184 aa28.4■■■□□ 2.14
PTPA-220ENST00000436883 TARBP1Q13395 1621 aaKnown RBP28.39■■■□□ 2.13
PTPA-220ENST00000436883 POLA1P09884 1462 aaPredicted RBP28.38■■■□□ 2.13
PTPA-220ENST00000436883 SOGA1O94964 1423 aa28.33■■■□□ 2.13
PTPA-220ENST00000436883 RAD54L2Q9Y4B4 1467 aa28.33■■■□□ 2.13
PTPA-220ENST00000436883 ARHGEF11O15085 1522 aa28.33■■■□□ 2.13
PTPA-220ENST00000436883 TDRD9Q8NDG6 1382 aaKnown RBP28.29■■■□□ 2.12
PTPA-220ENST00000436883 CHD1O14646 1710 aa28.27■■■□□ 2.12
PTPA-220ENST00000436883 CYB5RLQ6IPT4 315 aa28.27■■■□□ 2.12
PTPA-220ENST00000436883 FGD5Q6ZNL6 1462 aa28.21■■■□□ 2.11
PTPA-220ENST00000436883 SUPT5HO00267 1087 aaKnown RBP28.19■■■□□ 2.1
PTPA-220ENST00000436883 CUX1P39880 1505 aa28.17■■■□□ 2.1
PTPA-220ENST00000436883 CHMP7Q8WUX9 453 aaPredicted RBP28.13■■■□□ 2.09
PTPA-220ENST00000436883 SNAPC4Q5SXM2 1469 aa28.12■■■□□ 2.09
PTPA-220ENST00000436883 WDR97A6NE52 1622 aa28.06■■■□□ 2.08
PTPA-220ENST00000436883 ARAP1Q96P48 1450 aa28.04■■■□□ 2.08
PTPA-220ENST00000436883 GRIN2BQ13224 1484 aa28.03■■■□□ 2.08
PTPA-220ENST00000436883 MAGI1Q96QZ7 1491 aaPredicted RBP28.02■■■□□ 2.08
PTPA-220ENST00000436883 TRHP20396 242 aaPredicted RBP28.01■■■□□ 2.07
PTPA-220ENST00000436883 GAPVD1Q14C86 1478 aa27.95■■■□□ 2.06
PTPA-220ENST00000436883 SYNJ1O43426 1573 aa27.94■■■□□ 2.06
PTPA-220ENST00000436883 SYNJ2O15056 1496 aa27.93■■■□□ 2.06
PTPA-220ENST00000436883 CLASP1Q7Z460 1538 aa27.92■■■□□ 2.06
PTPA-220ENST00000436883 PBRM1Q86U86 1689 aa27.87■■■□□ 2.05
PTPA-220ENST00000436883 ABCA10Q8WWZ4 1543 aa27.87■■■□□ 2.05
PTPA-220ENST00000436883 WRNQ14191 1432 aaPredicted RBP eCLIP27.8■■■□□ 2.04
PTPA-220ENST00000436883 ABCA5Q8WWZ7 1642 aa27.78■■■□□ 2.04
PTPA-220ENST00000436883 TOP2BQ02880 1626 aa27.67■■■□□ 2.02
PTPA-220ENST00000436883 GRIN2AQ12879 1464 aa27.66■■■□□ 2.02
PTPA-220ENST00000436883 BIVM-ERCC5R4GMW8 1640 aa27.65■■■□□ 2.02
PTPA-220ENST00000436883 ADAMTS12P58397 1594 aa27.6■■■□□ 2.01
PTPA-220ENST00000436883 FHAD1B1AJZ9 1412 aa27.58■■■□□ 2
PTPA-220ENST00000436883 NUP160Q12769 1436 aa27.55■■■□□ 2
PTPA-220ENST00000436883 CEP170Q5SW79 1584 aa27.54■■■□□ 2
PTPA-220ENST00000436883 ERCC6L2Q5T890 1561 aa27.53■■■□□ 2
PTPA-220ENST00000436883 ERICH3Q5RHP9 1530 aa27.51■■□□□ 1.99
PTPA-220ENST00000436883 JPH4Q96JJ6 628 aa27.39■■□□□ 1.98
PTPA-220ENST00000436883 SHROOM2Q13796 1616 aa27.38■■□□□ 1.97
PTPA-220ENST00000436883 PRG4Q92954 1404 aaPredicted RBP27.36■■□□□ 1.97
PTPA-220ENST00000436883 AEBP2Q6ZN18 517 aaPredicted RBP27.25■■□□□ 1.95
PTPA-220ENST00000436883 IGF1RP08069 1367 aa27.22■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms