RNA–Protein interactions for RNA: ENST00000435643.1

AC007879.1-201, humanhuman

TSL 4 BASIC

Gene AC007879.1, Length 554 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC007879.1-201ENST00000435643 AEBP2Q6ZN18 517 aaPredicted RBP29.27■■■□□ 2.28
AC007879.1-201ENST00000435643 CHIC1Q5VXU3 224 aa27.68■■■□□ 2.02
AC007879.1-201ENST00000435643 SENP3Q9H4L4 574 aaPredicted RBP24.98■■□□□ 1.59
AC007879.1-201ENST00000435643 PHF23Q9BUL5 403 aaPredicted RBP24.61■■□□□ 1.53
AC007879.1-201ENST00000435643 FOXD1Q16676 465 aa23.29■■□□□ 1.32
AC007879.1-201ENST00000435643 PLPPR3Q6T4P5 718 aa22.04■■□□□ 1.12
AC007879.1-201ENST00000435643 MSH5O43196 834 aa21.85■■□□□ 1.09
AC007879.1-201ENST00000435643 PIAS4Q8N2W9 510 aaPredicted RBP21.72■■□□□ 1.07
AC007879.1-201ENST00000435643 PPP6R1Q9UPN7 881 aa21.67■■□□□ 1.06
AC007879.1-201ENST00000435643 ADRA2BP18089 450 aa21.59■■□□□ 1.05
AC007879.1-201ENST00000435643 POTEDQ86YR6 584 aa21.53■■□□□ 1.04
AC007879.1-201ENST00000435643 MAPK8IP2Q13387 824 aaPredicted RBP19.85■□□□□ 0.77
AC007879.1-201ENST00000435643 DMRT2Q9Y5R5 561 aa19.81■□□□□ 0.76
AC007879.1-201ENST00000435643 SCAF1Q9H7N4 1312 aaKnown RBP19.75■□□□□ 0.75
AC007879.1-201ENST00000435643 PPP4R3CPQ6ZMV5 832 aa19.3■□□□□ 0.68
AC007879.1-201ENST00000435643 NISCHQ9Y2I1 1504 aa19.15■□□□□ 0.66
AC007879.1-201ENST00000435643 HOXD11P31277 338 aaPredicted RBP19.03■□□□□ 0.64
AC007879.1-201ENST00000435643 CNKSR2Q8WXI2 1034 aa18.98■□□□□ 0.63
AC007879.1-201ENST00000435643 DCAF8L1A6NGE4 600 aa18.91■□□□□ 0.62
AC007879.1-201ENST00000435643 RNF216Q9NWF9 866 aaPredicted RBP18.85■□□□□ 0.61
AC007879.1-201ENST00000435643 CACNB1Q02641 598 aaPredicted RBP18.78■□□□□ 0.6
AC007879.1-201ENST00000435643 RNF39Q9H2S5 420 aa18.64■□□□□ 0.57
AC007879.1-201ENST00000435643 NCBP3Q53F19 620 aaKnown RBP18.51■□□□□ 0.55
AC007879.1-201ENST00000435643 DNAJC5BQ9UF47 199 aa18.43■□□□□ 0.54
AC007879.1-201ENST00000435643 C1QBPQ07021 282 aaKnown RBP18.36■□□□□ 0.53
AC007879.1-201ENST00000435643 NPM3O75607 178 aaKnown RBP18.27■□□□□ 0.52
AC007879.1-201ENST00000435643 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.08■□□□□ 0.48
AC007879.1-201ENST00000435643 KCNA4P22459 653 aa17.79■□□□□ 0.44
AC007879.1-201ENST00000435643 U3KPZ7 1027 aaPredicted RBP17.73■□□□□ 0.43
AC007879.1-201ENST00000435643 SPINK5Q9NQ38 1064 aaPredicted RBP17.49■□□□□ 0.39
AC007879.1-201ENST00000435643 SLC4A2P04920 1241 aa17.48■□□□□ 0.39
AC007879.1-201ENST00000435643 CAPN15O75808 1086 aa17.44■□□□□ 0.38
AC007879.1-201ENST00000435643 DSG3P32926 999 aa17.41■□□□□ 0.38
AC007879.1-201ENST00000435643 APLP2Q06481 763 aa17.21■□□□□ 0.35
AC007879.1-201ENST00000435643 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.16■□□□□ 0.34
AC007879.1-201ENST00000435643 HNRNPUL2Q1KMD3 747 aaKnown RBP17.16■□□□□ 0.34
AC007879.1-201ENST00000435643 ZNF219Q9P2Y4 722 aaPredicted RBP17.13■□□□□ 0.33
AC007879.1-201ENST00000435643 TRHP20396 242 aaPredicted RBP17.12■□□□□ 0.33
AC007879.1-201ENST00000435643 SAMD1Q6SPF0 538 aaPredicted RBP17.06■□□□□ 0.32
AC007879.1-201ENST00000435643 ABCB7O75027 752 aa17.03■□□□□ 0.32
AC007879.1-201ENST00000435643 CCDC180Q9P1Z9 1646 aa16.93■□□□□ 0.3
AC007879.1-201ENST00000435643 MYCNP04198 464 aaPredicted RBP16.91■□□□□ 0.3
AC007879.1-201ENST00000435643 POTEHQ6S545 545 aa16.84■□□□□ 0.29
AC007879.1-201ENST00000435643 SLC4A1APQ9BWU0 796 aaKnown RBP16.76■□□□□ 0.27
AC007879.1-201ENST00000435643 POLA2Q14181 598 aa16.65■□□□□ 0.26
AC007879.1-201ENST00000435643 FOXD4L1Q9NU39 408 aa16.65■□□□□ 0.26
AC007879.1-201ENST00000435643 RBM42Q9BTD8 480 aaKnown RBP16.61■□□□□ 0.25
AC007879.1-201ENST00000435643 ATF5Q9Y2D1 282 aaPredicted RBP16.51■□□□□ 0.23
AC007879.1-201ENST00000435643 ABCC9O60706 1549 aa16.42■□□□□ 0.22
AC007879.1-201ENST00000435643 ZBTB22O15209 634 aa16.38■□□□□ 0.21
AC007879.1-201ENST00000435643 ZBTB12Q9Y330 459 aaPredicted RBP16.33■□□□□ 0.2
AC007879.1-201ENST00000435643 CHRDL2Q6WN34 429 aa16.29■□□□□ 0.2
AC007879.1-201ENST00000435643 AKT1S1Q96B36 256 aa16.2■□□□□ 0.18
AC007879.1-201ENST00000435643 ATXN8OSP0DMR3 200 aa16.17■□□□□ 0.18
AC007879.1-201ENST00000435643 OSCARQ8IYS5 282 aa16.15■□□□□ 0.18
AC007879.1-201ENST00000435643 REM2Q8IYK8 340 aaPredicted RBP16.04■□□□□ 0.16
AC007879.1-201ENST00000435643 ZCCHC6Q5VYS8 1495 aaKnown RBP15.98■□□□□ 0.15
AC007879.1-201ENST00000435643 DCAF8L2P0C7V8 631 aa15.95■□□□□ 0.14
AC007879.1-201ENST00000435643 PITPNM1O00562 1244 aa15.88■□□□□ 0.13
AC007879.1-201ENST00000435643 PIP4P2Q8N4L2 257 aa15.88■□□□□ 0.13
AC007879.1-201ENST00000435643 NACADO15069 1562 aa15.87■□□□□ 0.13
AC007879.1-201ENST00000435643 FBLN2P98095 1184 aa15.86■□□□□ 0.13
AC007879.1-201ENST00000435643 DCAF1Q9Y4B6 1507 aa15.84■□□□□ 0.13
AC007879.1-201ENST00000435643 RB1CC1Q8TDY2 1594 aa15.84■□□□□ 0.13
AC007879.1-201ENST00000435643 MYO15BQ96JP2 1530 aa15.84■□□□□ 0.13
AC007879.1-201ENST00000435643 SPDYE2BA6NHP3 402 aa15.82■□□□□ 0.12
AC007879.1-201ENST00000435643 SPDYE6P0CI01 402 aa15.82■□□□□ 0.12
AC007879.1-201ENST00000435643 SPDYE2Q495Y8 402 aa15.82■□□□□ 0.12
AC007879.1-201ENST00000435643 FXR2P51116 673 aaKnown RBP eCLIP15.78■□□□□ 0.12
AC007879.1-201ENST00000435643 MKRN4PQ13434 485 aaPredicted RBP15.76■□□□□ 0.11
AC007879.1-201ENST00000435643 SP7Q8TDD2 431 aaPredicted RBP15.74■□□□□ 0.11
AC007879.1-201ENST00000435643 SSUH2Q9Y2M2 353 aa15.62■□□□□ 0.09
AC007879.1-201ENST00000435643 HAX1O00165 279 aa15.58■□□□□ 0.08
AC007879.1-201ENST00000435643 ZNF692Q9BU19 519 aaPredicted RBP15.57■□□□□ 0.08
AC007879.1-201ENST00000435643 SPDYE1Q8NFV5 336 aaPredicted RBP15.56■□□□□ 0.08
AC007879.1-201ENST00000435643 UNC13AQ9UPW8 1703 aa15.56■□□□□ 0.08
AC007879.1-201ENST00000435643 CSRNP3Q8WYN3 585 aa15.5■□□□□ 0.07
AC007879.1-201ENST00000435643 CLEC11AQ9Y240 323 aa15.5■□□□□ 0.07
AC007879.1-201ENST00000435643 SCRIBQ14160 1630 aa15.48■□□□□ 0.07
AC007879.1-201ENST00000435643 PRKAR2AP13861 404 aaKnown RBP15.45■□□□□ 0.06
AC007879.1-201ENST00000435643 EVX2Q03828 476 aa15.41■□□□□ 0.06
AC007879.1-201ENST00000435643 BICRAQ9NZM4 1560 aa15.41■□□□□ 0.06
AC007879.1-201ENST00000435643 PABPN1Q86U42 306 aaKnown RBP eCLIP15.4■□□□□ 0.06
AC007879.1-201ENST00000435643 C19orf67A6NJJ6 358 aa15.28■□□□□ 0.04
AC007879.1-201ENST00000435643 SHROOM4Q9ULL8 1493 aa15.25■□□□□ 0.03
AC007879.1-201ENST00000435643 PRR29P0C7W0 189 aa15.24■□□□□ 0.03
AC007879.1-201ENST00000435643 CHADLQ6NUI6 762 aa15.24■□□□□ 0.03
AC007879.1-201ENST00000435643 EHMT2Q96KQ7 1210 aa15.19■□□□□ 0.02
AC007879.1-201ENST00000435643 GABBR2O75899 941 aa15.06■□□□□ 0
AC007879.1-201ENST00000435643 FARP1Q9Y4F1 1045 aaPredicted RBP15.02■□□□□ -0
AC007879.1-201ENST00000435643 CD44P16070 742 aaKnown RBP14.96□□□□□ -0.01
AC007879.1-201ENST00000435643 EIF4G1Q04637 1599 aaKnown RBP14.95□□□□□ -0.02
AC007879.1-201ENST00000435643 CECR2Q9BXF3 1484 aa14.94□□□□□ -0.02
AC007879.1-201ENST00000435643 SPDYE4A6NLX3 237 aa14.92□□□□□ -0.02
AC007879.1-201ENST00000435643 STAG3Q9UJ98 1225 aa14.91□□□□□ -0.02
AC007879.1-201ENST00000435643 CREBZFQ9NS37 354 aa14.87□□□□□ -0.03
AC007879.1-201ENST00000435643 CC2D2AQ9P2K1 1620 aa14.86□□□□□ -0.03
AC007879.1-201ENST00000435643 SMARCA4P51532 1647 aa14.82□□□□□ -0.04
AC007879.1-201ENST00000435643 BAZ1AQ9NRL2 1556 aaPredicted RBP14.81□□□□□ -0.04
AC007879.1-201ENST00000435643 CLCN6P51797 869 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 228.1 ms