RNA–Protein interactions for RNA: ENST00000435315.2

AF127936.1-201, humanhuman

TSL 3 BASIC

Gene AF127936.1, Length 695 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AF127936.1-201ENST00000435315 AEBP2Q6ZN18 517 aaPredicted RBP22.74■■□□□ 1.23
AF127936.1-201ENST00000435315 CHIC1Q5VXU3 224 aa21.12■□□□□ 0.97
AF127936.1-201ENST00000435315 SENP3Q9H4L4 574 aaPredicted RBP19.39■□□□□ 0.69
AF127936.1-201ENST00000435315 PHF23Q9BUL5 403 aaPredicted RBP19.07■□□□□ 0.64
AF127936.1-201ENST00000435315 FOXD1Q16676 465 aa18.21■□□□□ 0.51
AF127936.1-201ENST00000435315 POTEDQ86YR6 584 aa17.89■□□□□ 0.45
AF127936.1-201ENST00000435315 MSH5O43196 834 aa17.21■□□□□ 0.35
AF127936.1-201ENST00000435315 PIAS4Q8N2W9 510 aaPredicted RBP16.8■□□□□ 0.28
AF127936.1-201ENST00000435315 PPP6R1Q9UPN7 881 aa16.58■□□□□ 0.24
AF127936.1-201ENST00000435315 ADRA2BP18089 450 aa16.44■□□□□ 0.22
AF127936.1-201ENST00000435315 PLPPR3Q6T4P5 718 aa16.41■□□□□ 0.22
AF127936.1-201ENST00000435315 DMRT2Q9Y5R5 561 aa15.32■□□□□ 0.04
AF127936.1-201ENST00000435315 MAPK8IP2Q13387 824 aaPredicted RBP15.31■□□□□ 0.04
AF127936.1-201ENST00000435315 NISCHQ9Y2I1 1504 aa15.15■□□□□ 0.02
AF127936.1-201ENST00000435315 CACNB1Q02641 598 aaPredicted RBP15.11■□□□□ 0.01
AF127936.1-201ENST00000435315 SCAF1Q9H7N4 1312 aaKnown RBP14.95□□□□□ -0.02
AF127936.1-201ENST00000435315 RNF39Q9H2S5 420 aa14.69□□□□□ -0.06
AF127936.1-201ENST00000435315 DCAF8L1A6NGE4 600 aa14.6□□□□□ -0.07
AF127936.1-201ENST00000435315 HOXD11P31277 338 aaPredicted RBP14.54□□□□□ -0.08
AF127936.1-201ENST00000435315 C1QBPQ07021 282 aaKnown RBP14.39□□□□□ -0.11
AF127936.1-201ENST00000435315 PPP4R3CPQ6ZMV5 832 aa14.32□□□□□ -0.12
AF127936.1-201ENST00000435315 RNF216Q9NWF9 866 aaPredicted RBP14.23□□□□□ -0.13
AF127936.1-201ENST00000435315 CNKSR2Q8WXI2 1034 aa14.18□□□□□ -0.14
AF127936.1-201ENST00000435315 DNAJC5BQ9UF47 199 aa14.16□□□□□ -0.14
AF127936.1-201ENST00000435315 KCNA4P22459 653 aa13.89□□□□□ -0.19
AF127936.1-201ENST00000435315 POTEHQ6S545 545 aa13.87□□□□□ -0.19
AF127936.1-201ENST00000435315 NCBP3Q53F19 620 aaKnown RBP13.83□□□□□ -0.2
AF127936.1-201ENST00000435315 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.74□□□□□ -0.21
AF127936.1-201ENST00000435315 NPM3O75607 178 aaKnown RBP13.7□□□□□ -0.22
AF127936.1-201ENST00000435315 CCDC180Q9P1Z9 1646 aa13.57□□□□□ -0.24
AF127936.1-201ENST00000435315 DSG3P32926 999 aa13.54□□□□□ -0.24
AF127936.1-201ENST00000435315 U3KPZ7 1027 aaPredicted RBP13.48□□□□□ -0.25
AF127936.1-201ENST00000435315 SPINK5Q9NQ38 1064 aaPredicted RBP13.46□□□□□ -0.25
AF127936.1-201ENST00000435315 CAPN15O75808 1086 aa13.39□□□□□ -0.27
AF127936.1-201ENST00000435315 SLC4A1APQ9BWU0 796 aaKnown RBP13.19□□□□□ -0.3
AF127936.1-201ENST00000435315 ABCC9O60706 1549 aa13.05□□□□□ -0.32
AF127936.1-201ENST00000435315 ABCB7O75027 752 aa13.05□□□□□ -0.32
AF127936.1-201ENST00000435315 TRHP20396 242 aaPredicted RBP13.02□□□□□ -0.33
AF127936.1-201ENST00000435315 SLC4A2P04920 1241 aa13.01□□□□□ -0.33
AF127936.1-201ENST00000435315 ZNF219Q9P2Y4 722 aaPredicted RBP13□□□□□ -0.33
AF127936.1-201ENST00000435315 APLP2Q06481 763 aa12.91□□□□□ -0.34
AF127936.1-201ENST00000435315 CHRDL2Q6WN34 429 aa12.85□□□□□ -0.35
AF127936.1-201ENST00000435315 RBM42Q9BTD8 480 aaKnown RBP12.85□□□□□ -0.35
AF127936.1-201ENST00000435315 ZBTB22O15209 634 aa12.81□□□□□ -0.36
AF127936.1-201ENST00000435315 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.78□□□□□ -0.36
AF127936.1-201ENST00000435315 HNRNPUL2Q1KMD3 747 aaKnown RBP12.78□□□□□ -0.36
AF127936.1-201ENST00000435315 FOXD4L1Q9NU39 408 aa12.78□□□□□ -0.36
AF127936.1-201ENST00000435315 EHMT2Q96KQ7 1210 aa12.76□□□□□ -0.37
AF127936.1-201ENST00000435315 SP7Q8TDD2 431 aaPredicted RBP12.72□□□□□ -0.37
AF127936.1-201ENST00000435315 SAMD1Q6SPF0 538 aaPredicted RBP12.71□□□□□ -0.37
AF127936.1-201ENST00000435315 RB1CC1Q8TDY2 1594 aa12.71□□□□□ -0.37
AF127936.1-201ENST00000435315 NACADO15069 1562 aa12.68□□□□□ -0.38
AF127936.1-201ENST00000435315 DCAF8L2P0C7V8 631 aa12.66□□□□□ -0.38
AF127936.1-201ENST00000435315 MYCNP04198 464 aaPredicted RBP12.64□□□□□ -0.39
AF127936.1-201ENST00000435315 CSRNP3Q8WYN3 585 aa12.64□□□□□ -0.39
AF127936.1-201ENST00000435315 ZCCHC6Q5VYS8 1495 aaKnown RBP12.63□□□□□ -0.39
AF127936.1-201ENST00000435315 MYO15BQ96JP2 1530 aa12.6□□□□□ -0.39
AF127936.1-201ENST00000435315 DCAF1Q9Y4B6 1507 aa12.57□□□□□ -0.4
AF127936.1-201ENST00000435315 POLA2Q14181 598 aa12.57□□□□□ -0.4
AF127936.1-201ENST00000435315 AKT1S1Q96B36 256 aa12.46□□□□□ -0.41
AF127936.1-201ENST00000435315 PIP4P2Q8N4L2 257 aa12.44□□□□□ -0.42
AF127936.1-201ENST00000435315 UNC13AQ9UPW8 1703 aa12.44□□□□□ -0.42
AF127936.1-201ENST00000435315 REM2Q8IYK8 340 aaPredicted RBP12.36□□□□□ -0.43
AF127936.1-201ENST00000435315 ATF5Q9Y2D1 282 aaPredicted RBP12.36□□□□□ -0.43
AF127936.1-201ENST00000435315 SCRIBQ14160 1630 aa12.31□□□□□ -0.44
AF127936.1-201ENST00000435315 HAX1O00165 279 aa12.31□□□□□ -0.44
AF127936.1-201ENST00000435315 ATXN8OSP0DMR3 200 aa12.3□□□□□ -0.44
AF127936.1-201ENST00000435315 FXR2P51116 673 aaKnown RBP eCLIP12.29□□□□□ -0.44
AF127936.1-201ENST00000435315 PITPNM1O00562 1244 aa12.26□□□□□ -0.45
AF127936.1-201ENST00000435315 EVX2Q03828 476 aa12.23□□□□□ -0.45
AF127936.1-201ENST00000435315 OSCARQ8IYS5 282 aa12.22□□□□□ -0.45
AF127936.1-201ENST00000435315 ZBTB12Q9Y330 459 aaPredicted RBP12.22□□□□□ -0.45
AF127936.1-201ENST00000435315 SHROOM4Q9ULL8 1493 aa12.19□□□□□ -0.46
AF127936.1-201ENST00000435315 BICRAQ9NZM4 1560 aa12.18□□□□□ -0.46
AF127936.1-201ENST00000435315 PABPN1Q86U42 306 aaKnown RBP eCLIP12.15□□□□□ -0.46
AF127936.1-201ENST00000435315 EIF4G1Q04637 1599 aaKnown RBP11.92□□□□□ -0.5
AF127936.1-201ENST00000435315 C19orf67A6NJJ6 358 aa11.92□□□□□ -0.5
AF127936.1-201ENST00000435315 LHX8Q68G74 356 aa11.9□□□□□ -0.5
AF127936.1-201ENST00000435315 PRKAR2AP13861 404 aaKnown RBP11.89□□□□□ -0.51
AF127936.1-201ENST00000435315 GABBR2O75899 941 aa11.87□□□□□ -0.51
AF127936.1-201ENST00000435315 CC2D2AQ9P2K1 1620 aa11.86□□□□□ -0.51
AF127936.1-201ENST00000435315 SPDYE2BA6NHP3 402 aa11.84□□□□□ -0.51
AF127936.1-201ENST00000435315 SPDYE6P0CI01 402 aa11.84□□□□□ -0.51
AF127936.1-201ENST00000435315 SPDYE2Q495Y8 402 aa11.84□□□□□ -0.51
AF127936.1-201ENST00000435315 BAZ1AQ9NRL2 1556 aaPredicted RBP11.81□□□□□ -0.52
AF127936.1-201ENST00000435315 MKRN4PQ13434 485 aaPredicted RBP11.81□□□□□ -0.52
AF127936.1-201ENST00000435315 SMARCA4P51532 1647 aa11.78□□□□□ -0.52
AF127936.1-201ENST00000435315 FBLN2P98095 1184 aa11.77□□□□□ -0.53
AF127936.1-201ENST00000435315 SPDYE1Q8NFV5 336 aaPredicted RBP11.75□□□□□ -0.53
AF127936.1-201ENST00000435315 CLEC11AQ9Y240 323 aa11.74□□□□□ -0.53
AF127936.1-201ENST00000435315 CECR2Q9BXF3 1484 aa11.73□□□□□ -0.53
AF127936.1-201ENST00000435315 SMARCA2P51531 1590 aa11.72□□□□□ -0.53
AF127936.1-201ENST00000435315 POTEIP0CG38 1075 aa11.67□□□□□ -0.54
AF127936.1-201ENST00000435315 SSUH2Q9Y2M2 353 aa11.67□□□□□ -0.54
AF127936.1-201ENST00000435315 CHADLQ6NUI6 762 aa11.65□□□□□ -0.54
AF127936.1-201ENST00000435315 PEG3Q9GZU2 1588 aa11.65□□□□□ -0.54
AF127936.1-201ENST00000435315 MROH2BQ7Z745 1585 aa11.63□□□□□ -0.55
AF127936.1-201ENST00000435315 HMGXB3Q12766 1538 aa11.63□□□□□ -0.55
AF127936.1-201ENST00000435315 ATAD2BQ9ULI0 1458 aa11.63□□□□□ -0.55
AF127936.1-201ENST00000435315 NCAPD3P42695 1498 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms