RNA–Protein interactions for RNA: ENST00000435305.1

PTPA-219, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 2 BASIC

Gene PTPA, Length 530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-219ENST00000435305 NISCHQ9Y2I1 1504 aa31.02■■■□□ 2.56
PTPA-219ENST00000435305 CCDC180Q9P1Z9 1646 aa27.77■■■□□ 2.04
PTPA-219ENST00000435305 ABCC9O60706 1549 aa27.49■■□□□ 1.99
PTPA-219ENST00000435305 RB1CC1Q8TDY2 1594 aa26.33■■□□□ 1.81
PTPA-219ENST00000435305 DCAF8L2P0C7V8 631 aa26.23■■□□□ 1.79
PTPA-219ENST00000435305 NACADO15069 1562 aa26.19■■□□□ 1.78
PTPA-219ENST00000435305 MYO15BQ96JP2 1530 aa25.87■■□□□ 1.73
PTPA-219ENST00000435305 ZCCHC6Q5VYS8 1495 aaKnown RBP25.73■■□□□ 1.71
PTPA-219ENST00000435305 UNC13AQ9UPW8 1703 aa25.7■■□□□ 1.7
PTPA-219ENST00000435305 PABPN1Q86U42 306 aaKnown RBP eCLIP25.64■■□□□ 1.7
PTPA-219ENST00000435305 DCAF1Q9Y4B6 1507 aa25.63■■□□□ 1.69
PTPA-219ENST00000435305 DNAJC5BQ9UF47 199 aa25.46■■□□□ 1.67
PTPA-219ENST00000435305 BICRAQ9NZM4 1560 aa25.42■■□□□ 1.66
PTPA-219ENST00000435305 SCRIBQ14160 1630 aa25.3■■□□□ 1.64
PTPA-219ENST00000435305 SHROOM4Q9ULL8 1493 aa25.2■■□□□ 1.62
PTPA-219ENST00000435305 CC2D2AQ9P2K1 1620 aa24.85■■□□□ 1.57
PTPA-219ENST00000435305 EIF4G1Q04637 1599 aaKnown RBP24.84■■□□□ 1.57
PTPA-219ENST00000435305 CECR2Q9BXF3 1484 aa24.74■■□□□ 1.55
PTPA-219ENST00000435305 SMARCA4P51532 1647 aa24.15■■□□□ 1.46
PTPA-219ENST00000435305 NCAPD3P42695 1498 aa24.13■■□□□ 1.45
PTPA-219ENST00000435305 BAZ1AQ9NRL2 1556 aaPredicted RBP24.11■■□□□ 1.45
PTPA-219ENST00000435305 SMARCA2P51531 1590 aa24.1■■□□□ 1.45
PTPA-219ENST00000435305 ATAD2BQ9ULI0 1458 aa24.09■■□□□ 1.45
PTPA-219ENST00000435305 HMGXB3Q12766 1538 aa23.99■■□□□ 1.43
PTPA-219ENST00000435305 BAZ1BQ9UIG0 1483 aaKnown RBP23.93■■□□□ 1.42
PTPA-219ENST00000435305 PEG3Q9GZU2 1588 aa23.88■■□□□ 1.41
PTPA-219ENST00000435305 MROH2BQ7Z745 1585 aa23.87■■□□□ 1.41
PTPA-219ENST00000435305 ERCC6Q03468 1493 aa23.79■■□□□ 1.4
PTPA-219ENST00000435305 WIZO95785 1651 aa23.64■■□□□ 1.38
PTPA-219ENST00000435305 NESP48681 1621 aa23.64■■□□□ 1.38
PTPA-219ENST00000435305 CUX2O14529 1486 aa23.61■■□□□ 1.37
PTPA-219ENST00000435305 LAMC3Q9Y6N6 1575 aa23.6■■□□□ 1.37
PTPA-219ENST00000435305 RSF1Q96T23 1441 aaPredicted RBP23.48■■□□□ 1.35
PTPA-219ENST00000435305 PDS5BQ9NTI5 1447 aa23.48■■□□□ 1.35
PTPA-219ENST00000435305 CADPSQ9ULU8 1353 aa23.44■■□□□ 1.34
PTPA-219ENST00000435305 KIF21AQ7Z4S6 1674 aa23.41■■□□□ 1.34
PTPA-219ENST00000435305 TOP2AP11388 1531 aaKnown RBP23.36■■□□□ 1.33
PTPA-219ENST00000435305 THOC2Q8NI27 1593 aaKnown RBP23.35■■□□□ 1.33
PTPA-219ENST00000435305 DNAJC5Q9H3Z4 198 aa23.28■■□□□ 1.32
PTPA-219ENST00000435305 MRC2Q9UBG0 1479 aa23.22■■□□□ 1.31
PTPA-219ENST00000435305 CEP164Q9UPV0 1460 aa23.2■■□□□ 1.3
PTPA-219ENST00000435305 CFTRP13569 1480 aa23.19■■□□□ 1.3
PTPA-219ENST00000435305 FANCD2Q9BXW9 1451 aa23.17■■□□□ 1.3
PTPA-219ENST00000435305 WDR62O43379 1518 aa23.11■■□□□ 1.29
PTPA-219ENST00000435305 PRDM2Q13029 1718 aa23.09■■□□□ 1.29
PTPA-219ENST00000435305 CCDC88BA6NC98 1476 aa23.08■■□□□ 1.29
PTPA-219ENST00000435305 URB2Q14146 1524 aaKnown RBP22.91■■□□□ 1.26
PTPA-219ENST00000435305 ABCC8Q09428 1581 aa22.81■■□□□ 1.24
PTPA-219ENST00000435305 SUPT5HO00267 1087 aaKnown RBP22.77■■□□□ 1.24
PTPA-219ENST00000435305 TOPBP1Q92547 1522 aa22.75■■□□□ 1.23
PTPA-219ENST00000435305 IFT140Q96RY7 1462 aa22.72■■□□□ 1.23
PTPA-219ENST00000435305 DNMBPQ6XZF7 1577 aa22.71■■□□□ 1.23
PTPA-219ENST00000435305 OSCARQ8IYS5 282 aa22.64■■□□□ 1.21
PTPA-219ENST00000435305 ZNF608Q9ULD9 1512 aaPredicted RBP22.58■■□□□ 1.21
PTPA-219ENST00000435305 POLA1P09884 1462 aaPredicted RBP22.52■■□□□ 1.2
PTPA-219ENST00000435305 EIF4G3O43432 1585 aaKnown RBP22.51■■□□□ 1.19
PTPA-219ENST00000435305 TARBP1Q13395 1621 aaKnown RBP22.5■■□□□ 1.19
PTPA-219ENST00000435305 SOGA1O94964 1423 aa22.48■■□□□ 1.19
PTPA-219ENST00000435305 AQRO60306 1485 aaKnown RBP eCLIP22.46■■□□□ 1.193e-7■■■■■ 30.5
PTPA-219ENST00000435305 TRIM41Q8WV44 630 aa22.45■■□□□ 1.18
PTPA-219ENST00000435305 FGD5Q6ZNL6 1462 aa22.43■■□□□ 1.18
PTPA-219ENST00000435305 RAD54L2Q9Y4B4 1467 aa22.42■■□□□ 1.18
PTPA-219ENST00000435305 CUX1P39880 1505 aa22.41■■□□□ 1.18
PTPA-219ENST00000435305 FBLN2P98095 1184 aa22.38■■□□□ 1.17
PTPA-219ENST00000435305 TDRD9Q8NDG6 1382 aaKnown RBP22.37■■□□□ 1.17
PTPA-219ENST00000435305 WDR97A6NE52 1622 aa22.36■■□□□ 1.17
PTPA-219ENST00000435305 CHD1O14646 1710 aa22.34■■□□□ 1.17
PTPA-219ENST00000435305 GRIN2BQ13224 1484 aa22.25■■□□□ 1.15
PTPA-219ENST00000435305 CHMP7Q8WUX9 453 aaPredicted RBP22.24■■□□□ 1.15
PTPA-219ENST00000435305 RIMBP3CA6NJZ7 1639 aa22.24■■□□□ 1.15
PTPA-219ENST00000435305 RIMBP3BA6NNM3 1639 aa22.24■■□□□ 1.15
PTPA-219ENST00000435305 RIMBP3Q9UFD9 1639 aa22.24■■□□□ 1.15
PTPA-219ENST00000435305 SNAPC4Q5SXM2 1469 aa22.23■■□□□ 1.15
PTPA-219ENST00000435305 MAGI1Q96QZ7 1491 aaPredicted RBP22.22■■□□□ 1.15
PTPA-219ENST00000435305 WRNQ14191 1432 aaPredicted RBP eCLIP22.21■■□□□ 1.15
PTPA-219ENST00000435305 GAPVD1Q14C86 1478 aa22.21■■□□□ 1.15
PTPA-219ENST00000435305 PBRM1Q86U86 1689 aa22.2■■□□□ 1.14
PTPA-219ENST00000435305 ABCA10Q8WWZ4 1543 aa22.19■■□□□ 1.14
PTPA-219ENST00000435305 ARHGEF11O15085 1522 aa22.18■■□□□ 1.14
PTPA-219ENST00000435305 TOP2BQ02880 1626 aa22.17■■□□□ 1.14
PTPA-219ENST00000435305 BIVM-ERCC5R4GMW8 1640 aa22.17■■□□□ 1.14
PTPA-219ENST00000435305 SYNJ2O15056 1496 aa22.13■■□□□ 1.13
PTPA-219ENST00000435305 SYNJ1O43426 1573 aa22.12■■□□□ 1.13
PTPA-219ENST00000435305 ABCA5Q8WWZ7 1642 aa22.12■■□□□ 1.13
PTPA-219ENST00000435305 CYB5RLQ6IPT4 315 aa22.08■■□□□ 1.13
PTPA-219ENST00000435305 CLASP1Q7Z460 1538 aa22.01■■□□□ 1.11
PTPA-219ENST00000435305 ARAP1Q96P48 1450 aa21.95■■□□□ 1.1
PTPA-219ENST00000435305 ERICH3Q5RHP9 1530 aa21.95■■□□□ 1.1
PTPA-219ENST00000435305 ADAMTS12P58397 1594 aa21.94■■□□□ 1.1
PTPA-219ENST00000435305 FHAD1B1AJZ9 1412 aa21.93■■□□□ 1.1
PTPA-219ENST00000435305 GRIN2AQ12879 1464 aa21.93■■□□□ 1.1
PTPA-219ENST00000435305 NUP160Q12769 1436 aa21.82■■□□□ 1.08
PTPA-219ENST00000435305 TRHP20396 242 aaPredicted RBP21.81■■□□□ 1.08
PTPA-219ENST00000435305 CEP170Q5SW79 1584 aa21.81■■□□□ 1.08
PTPA-219ENST00000435305 KIF27Q86VH2 1401 aa21.8■■□□□ 1.08
PTPA-219ENST00000435305 CUL7Q14999 1698 aa21.72■■□□□ 1.07
PTPA-219ENST00000435305 IGF1RP08069 1367 aa21.7■■□□□ 1.06
PTPA-219ENST00000435305 SHROOM2Q13796 1616 aa21.69■■□□□ 1.06
PTPA-219ENST00000435305 JPH4Q96JJ6 628 aa21.69■■□□□ 1.06
PTPA-219ENST00000435305 ERCC6L2Q5T890 1561 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms