RNA–Protein interactions for RNA: ENST00000435132.5

PTPA-218, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 2 BASIC

Gene PTPA, Length 618 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-218ENST00000435132 NISCHQ9Y2I1 1504 aa36.26■■■■□ 3.4
PTPA-218ENST00000435132 CCDC180Q9P1Z9 1646 aa32.38■■■□□ 2.77
PTPA-218ENST00000435132 ABCC9O60706 1549 aa32.16■■■□□ 2.74
PTPA-218ENST00000435132 RB1CC1Q8TDY2 1594 aa30.75■■■□□ 2.51
PTPA-218ENST00000435132 NACADO15069 1562 aa30.61■■■□□ 2.49
PTPA-218ENST00000435132 DCAF8L2P0C7V8 631 aa30.6■■■□□ 2.49
PTPA-218ENST00000435132 MYO15BQ96JP2 1530 aa30.29■■■□□ 2.44
PTPA-218ENST00000435132 ZCCHC6Q5VYS8 1495 aaKnown RBP30.11■■■□□ 2.41
PTPA-218ENST00000435132 PABPN1Q86U42 306 aaKnown RBP eCLIP30■■■□□ 2.39
PTPA-218ENST00000435132 DCAF1Q9Y4B6 1507 aa29.99■■■□□ 2.39
PTPA-218ENST00000435132 UNC13AQ9UPW8 1703 aa29.86■■■□□ 2.37
PTPA-218ENST00000435132 DNAJC5BQ9UF47 199 aa29.86■■■□□ 2.37
PTPA-218ENST00000435132 BICRAQ9NZM4 1560 aa29.74■■■□□ 2.35
PTPA-218ENST00000435132 SCRIBQ14160 1630 aa29.53■■■□□ 2.32
PTPA-218ENST00000435132 SHROOM4Q9ULL8 1493 aa29.51■■■□□ 2.31
PTPA-218ENST00000435132 EIF4G1Q04637 1599 aaKnown RBP29.05■■■□□ 2.24
PTPA-218ENST00000435132 CC2D2AQ9P2K1 1620 aa29.02■■■□□ 2.24
PTPA-218ENST00000435132 CECR2Q9BXF3 1484 aa28.96■■■□□ 2.23
PTPA-218ENST00000435132 NCAPD3P42695 1498 aa28.26■■■□□ 2.11
PTPA-218ENST00000435132 SMARCA4P51532 1647 aa28.2■■■□□ 2.1
PTPA-218ENST00000435132 ATAD2BQ9ULI0 1458 aa28.2■■■□□ 2.1
PTPA-218ENST00000435132 BAZ1AQ9NRL2 1556 aaPredicted RBP28.16■■■□□ 2.1
PTPA-218ENST00000435132 SMARCA2P51531 1590 aa28.16■■■□□ 2.1
PTPA-218ENST00000435132 HMGXB3Q12766 1538 aa28.06■■■□□ 2.08
PTPA-218ENST00000435132 BAZ1BQ9UIG0 1483 aaKnown RBP27.97■■■□□ 2.07
PTPA-218ENST00000435132 PEG3Q9GZU2 1588 aa27.94■■■□□ 2.06
PTPA-218ENST00000435132 MROH2BQ7Z745 1585 aa27.92■■■□□ 2.06
PTPA-218ENST00000435132 ERCC6Q03468 1493 aa27.81■■■□□ 2.04
PTPA-218ENST00000435132 NESP48681 1621 aa27.66■■■□□ 2.02
PTPA-218ENST00000435132 CUX2O14529 1486 aa27.64■■■□□ 2.02
PTPA-218ENST00000435132 LAMC3Q9Y6N6 1575 aa27.57■■■□□ 2
PTPA-218ENST00000435132 WIZO95785 1651 aa27.56■■■□□ 2
PTPA-218ENST00000435132 RSF1Q96T23 1441 aaPredicted RBP27.48■■□□□ 1.99
PTPA-218ENST00000435132 PDS5BQ9NTI5 1447 aa27.47■■□□□ 1.99
PTPA-218ENST00000435132 CADPSQ9ULU8 1353 aa27.44■■□□□ 1.98
PTPA-218ENST00000435132 THOC2Q8NI27 1593 aaKnown RBP27.31■■□□□ 1.96
PTPA-218ENST00000435132 DNAJC5Q9H3Z4 198 aa27.3■■□□□ 1.96
PTPA-218ENST00000435132 TOP2AP11388 1531 aaKnown RBP27.3■■□□□ 1.96
PTPA-218ENST00000435132 KIF21AQ7Z4S6 1674 aa27.26■■□□□ 1.95
PTPA-218ENST00000435132 CFTRP13569 1480 aa27.16■■□□□ 1.94
PTPA-218ENST00000435132 MRC2Q9UBG0 1479 aa27.16■■□□□ 1.94
PTPA-218ENST00000435132 CEP164Q9UPV0 1460 aa27.13■■□□□ 1.93
PTPA-218ENST00000435132 FANCD2Q9BXW9 1451 aa27.1■■□□□ 1.93
PTPA-218ENST00000435132 WDR62O43379 1518 aa27.05■■□□□ 1.92
PTPA-218ENST00000435132 CCDC88BA6NC98 1476 aa26.99■■□□□ 1.91
PTPA-218ENST00000435132 URB2Q14146 1524 aaKnown RBP26.81■■□□□ 1.88
PTPA-218ENST00000435132 PRDM2Q13029 1718 aa26.78■■□□□ 1.88
PTPA-218ENST00000435132 ABCC8Q09428 1581 aa26.64■■□□□ 1.86
PTPA-218ENST00000435132 TOPBP1Q92547 1522 aa26.6■■□□□ 1.85
PTPA-218ENST00000435132 IFT140Q96RY7 1462 aa26.58■■□□□ 1.85
PTPA-218ENST00000435132 SUPT5HO00267 1087 aaKnown RBP26.54■■□□□ 1.84
PTPA-218ENST00000435132 DNMBPQ6XZF7 1577 aa26.53■■□□□ 1.84
PTPA-218ENST00000435132 OSCARQ8IYS5 282 aa26.48■■□□□ 1.83
PTPA-218ENST00000435132 ZNF608Q9ULD9 1512 aaPredicted RBP26.44■■□□□ 1.82
PTPA-218ENST00000435132 POLA1P09884 1462 aaPredicted RBP26.35■■□□□ 1.81
PTPA-218ENST00000435132 EIF4G3O43432 1585 aaKnown RBP26.3■■□□□ 1.8
PTPA-218ENST00000435132 TARBP1Q13395 1621 aaKnown RBP26.29■■□□□ 1.8
PTPA-218ENST00000435132 SOGA1O94964 1423 aa26.28■■□□□ 1.8
PTPA-218ENST00000435132 AQRO60306 1485 aaKnown RBP eCLIP26.27■■□□□ 1.83e-7■■■■■ 30.5
PTPA-218ENST00000435132 TRIM41Q8WV44 630 aa26.25■■□□□ 1.79
PTPA-218ENST00000435132 RAD54L2Q9Y4B4 1467 aa26.23■■□□□ 1.79
PTPA-218ENST00000435132 FGD5Q6ZNL6 1462 aa26.23■■□□□ 1.79
PTPA-218ENST00000435132 CUX1P39880 1505 aa26.21■■□□□ 1.79
PTPA-218ENST00000435132 TDRD9Q8NDG6 1382 aaKnown RBP26.17■■□□□ 1.78
PTPA-218ENST00000435132 FBLN2P98095 1184 aa26.13■■□□□ 1.77
PTPA-218ENST00000435132 WDR97A6NE52 1622 aa26.12■■□□□ 1.77
PTPA-218ENST00000435132 GRIN2BQ13224 1484 aa26.02■■□□□ 1.76
PTPA-218ENST00000435132 SNAPC4Q5SXM2 1469 aa26.01■■□□□ 1.75
PTPA-218ENST00000435132 CHMP7Q8WUX9 453 aaPredicted RBP25.99■■□□□ 1.75
PTPA-218ENST00000435132 CHD1O14646 1710 aa25.99■■□□□ 1.75
PTPA-218ENST00000435132 MAGI1Q96QZ7 1491 aaPredicted RBP25.98■■□□□ 1.75
PTPA-218ENST00000435132 RIMBP3CA6NJZ7 1639 aa25.97■■□□□ 1.75
PTPA-218ENST00000435132 RIMBP3BA6NNM3 1639 aa25.97■■□□□ 1.75
PTPA-218ENST00000435132 RIMBP3Q9UFD9 1639 aa25.97■■□□□ 1.75
PTPA-218ENST00000435132 ARHGEF11O15085 1522 aa25.96■■□□□ 1.75
PTPA-218ENST00000435132 WRNQ14191 1432 aaPredicted RBP eCLIP25.96■■□□□ 1.751e-6■■□□□ 12
PTPA-218ENST00000435132 ABCA10Q8WWZ4 1543 aa25.95■■□□□ 1.74
PTPA-218ENST00000435132 GAPVD1Q14C86 1478 aa25.95■■□□□ 1.74
PTPA-218ENST00000435132 SYNJ2O15056 1496 aa25.89■■□□□ 1.73
PTPA-218ENST00000435132 TOP2BQ02880 1626 aa25.88■■□□□ 1.73
PTPA-218ENST00000435132 BIVM-ERCC5R4GMW8 1640 aa25.86■■□□□ 1.73
PTPA-218ENST00000435132 ABCA5Q8WWZ7 1642 aa25.84■■□□□ 1.73
PTPA-218ENST00000435132 SYNJ1O43426 1573 aa25.83■■□□□ 1.73
PTPA-218ENST00000435132 PBRM1Q86U86 1689 aa25.82■■□□□ 1.72
PTPA-218ENST00000435132 CYB5RLQ6IPT4 315 aa25.81■■□□□ 1.72
PTPA-218ENST00000435132 CLASP1Q7Z460 1538 aa25.76■■□□□ 1.71
PTPA-218ENST00000435132 ARAP1Q96P48 1450 aa25.7■■□□□ 1.7
PTPA-218ENST00000435132 GRIN2AQ12879 1464 aa25.66■■□□□ 1.7
PTPA-218ENST00000435132 FHAD1B1AJZ9 1412 aa25.65■■□□□ 1.7
PTPA-218ENST00000435132 ERICH3Q5RHP9 1530 aa25.64■■□□□ 1.7
PTPA-218ENST00000435132 ADAMTS12P58397 1594 aa25.64■■□□□ 1.69
PTPA-218ENST00000435132 NUP160Q12769 1436 aa25.55■■□□□ 1.68
PTPA-218ENST00000435132 CEP170Q5SW79 1584 aa25.49■■□□□ 1.67
PTPA-218ENST00000435132 TRHP20396 242 aaPredicted RBP25.48■■□□□ 1.67
PTPA-218ENST00000435132 KIF27Q86VH2 1401 aa25.47■■□□□ 1.67
PTPA-218ENST00000435132 IGF1RP08069 1367 aa25.39■■□□□ 1.65
PTPA-218ENST00000435132 SHROOM2Q13796 1616 aa25.35■■□□□ 1.65
PTPA-218ENST00000435132 JPH4Q96JJ6 628 aa25.35■■□□□ 1.65
PTPA-218ENST00000435132 ERCC6L2Q5T890 1561 aa25.34■■□□□ 1.65
PTPA-218ENST00000435132 PRG4Q92954 1404 aaPredicted RBP25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms