RNA–Protein interactions for RNA: ENST00000434988.1

AC009988.1-201, humanhuman

TSL 5 BASIC

Gene AC009988.1, Length 310 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009988.1-201ENST00000434988 NISCHQ9Y2I1 1504 aa17.66■□□□□ 0.42
AC009988.1-201ENST00000434988 CCDC180Q9P1Z9 1646 aa15.28■□□□□ 0.04
AC009988.1-201ENST00000434988 ZCCHC6Q5VYS8 1495 aaKnown RBP14.86□□□□□ -0.03
AC009988.1-201ENST00000434988 DCAF1Q9Y4B6 1507 aa14.69□□□□□ -0.06
AC009988.1-201ENST00000434988 DCAF8L2P0C7V8 631 aa14.54□□□□□ -0.08
AC009988.1-201ENST00000434988 SHROOM4Q9ULL8 1493 aa14.47□□□□□ -0.09
AC009988.1-201ENST00000434988 MYO15BQ96JP2 1530 aa14.46□□□□□ -0.1
AC009988.1-201ENST00000434988 NACADO15069 1562 aa14.23□□□□□ -0.13
AC009988.1-201ENST00000434988 SUPT5HO00267 1087 aaKnown RBP14.17□□□□□ -0.14
AC009988.1-201ENST00000434988 ABCC9O60706 1549 aa14.12□□□□□ -0.15
AC009988.1-201ENST00000434988 RB1CC1Q8TDY2 1594 aa14.02□□□□□ -0.16
AC009988.1-201ENST00000434988 SCRIBQ14160 1630 aa13.97□□□□□ -0.17
AC009988.1-201ENST00000434988 RSF1Q96T23 1441 aaPredicted RBP13.79□□□□□ -0.2
AC009988.1-201ENST00000434988 CHIC1Q5VXU3 224 aa13.74□□□□□ -0.21
AC009988.1-201ENST00000434988 BAZ1AQ9NRL2 1556 aaPredicted RBP13.65□□□□□ -0.22
AC009988.1-201ENST00000434988 CECR2Q9BXF3 1484 aa13.61□□□□□ -0.23
AC009988.1-201ENST00000434988 MROH2BQ7Z745 1585 aa13.58□□□□□ -0.24
AC009988.1-201ENST00000434988 UNC13AQ9UPW8 1703 aa13.53□□□□□ -0.24
AC009988.1-201ENST00000434988 SMARCA4P51532 1647 aa13.47□□□□□ -0.25
AC009988.1-201ENST00000434988 BICRAQ9NZM4 1560 aa13.45□□□□□ -0.26
AC009988.1-201ENST00000434988 WIZO95785 1651 aa13.44□□□□□ -0.26
AC009988.1-201ENST00000434988 TRIM41Q8WV44 630 aa13.42□□□□□ -0.26
AC009988.1-201ENST00000434988 TOP2AP11388 1531 aaKnown RBP13.42□□□□□ -0.26
AC009988.1-201ENST00000434988 PABPN1Q86U42 306 aaKnown RBP eCLIP13.4□□□□□ -0.26
AC009988.1-201ENST00000434988 PEG3Q9GZU2 1588 aa13.36□□□□□ -0.27
AC009988.1-201ENST00000434988 SMARCA2P51531 1590 aa13.29□□□□□ -0.28
AC009988.1-201ENST00000434988 CCDC88BA6NC98 1476 aa13.28□□□□□ -0.28
AC009988.1-201ENST00000434988 ATAD2BQ9ULI0 1458 aa13.23□□□□□ -0.29
AC009988.1-201ENST00000434988 BAZ1BQ9UIG0 1483 aaKnown RBP13.19□□□□□ -0.3
AC009988.1-201ENST00000434988 EIF4G1Q04637 1599 aaKnown RBP13.16□□□□□ -0.3
AC009988.1-201ENST00000434988 LOC105371045A0A1W2PR82 267 aa13.15□□□□□ -0.3
AC009988.1-201ENST00000434988 NCAPD3P42695 1498 aa13.14□□□□□ -0.31
AC009988.1-201ENST00000434988 EEA1Q15075 1411 aa13.11□□□□□ -0.31
AC009988.1-201ENST00000434988 HMGXB3Q12766 1538 aa13.1□□□□□ -0.31
AC009988.1-201ENST00000434988 FAM9AQ8IZU1 332 aaPredicted RBP13.03□□□□□ -0.32
AC009988.1-201ENST00000434988 WRNQ14191 1432 aaPredicted RBP eCLIP13.02□□□□□ -0.33
AC009988.1-201ENST00000434988 ABCC8Q09428 1581 aa12.97□□□□□ -0.33
AC009988.1-201ENST00000434988 TRIM26Q12899 539 aaPredicted RBP12.96□□□□□ -0.33
AC009988.1-201ENST00000434988 CSRNP3Q8WYN3 585 aa12.96□□□□□ -0.33
AC009988.1-201ENST00000434988 PCGF6Q9BYE7 350 aa12.9□□□□□ -0.34
AC009988.1-201ENST00000434988 TNIKQ9UKE5 1360 aa12.88□□□□□ -0.35
AC009988.1-201ENST00000434988 CFTRP13569 1480 aa12.88□□□□□ -0.35
AC009988.1-201ENST00000434988 SOGA1O94964 1423 aa12.85□□□□□ -0.35
AC009988.1-201ENST00000434988 TOP2BQ02880 1626 aa12.84□□□□□ -0.35
AC009988.1-201ENST00000434988 GOLGA3Q08378 1498 aa12.83□□□□□ -0.36
AC009988.1-201ENST00000434988 CADPSQ9ULU8 1353 aa12.82□□□□□ -0.36
AC009988.1-201ENST00000434988 CEP164Q9UPV0 1460 aa12.82□□□□□ -0.36
AC009988.1-201ENST00000434988 SYNJ1O43426 1573 aa12.81□□□□□ -0.36
AC009988.1-201ENST00000434988 UBTFP17480 764 aaKnown RBP12.8□□□□□ -0.36
AC009988.1-201ENST00000434988 HRCP23327 699 aa12.8□□□□□ -0.36
AC009988.1-201ENST00000434988 CC2D2AQ9P2K1 1620 aa12.8□□□□□ -0.36
AC009988.1-201ENST00000434988 BIVM-ERCC5R4GMW8 1640 aa12.8□□□□□ -0.36
AC009988.1-201ENST00000434988 KIF21BO75037 1637 aa12.77□□□□□ -0.37
AC009988.1-201ENST00000434988 PRDM2Q13029 1718 aa12.75□□□□□ -0.37
AC009988.1-201ENST00000434988 ZEB1P37275 1124 aaPredicted RBP12.74□□□□□ -0.37
AC009988.1-201ENST00000434988 EHMT2Q96KQ7 1210 aa12.74□□□□□ -0.37
AC009988.1-201ENST00000434988 CEP162Q5TB80 1403 aa12.73□□□□□ -0.37
AC009988.1-201ENST00000434988 RUSC2Q8N2Y8 1516 aa12.72□□□□□ -0.37
AC009988.1-201ENST00000434988 KIF27Q86VH2 1401 aa12.72□□□□□ -0.37
AC009988.1-201ENST00000434988 CUX1P39880 1505 aa12.67□□□□□ -0.38
AC009988.1-201ENST00000434988 ERICH3Q5RHP9 1530 aa12.67□□□□□ -0.38
AC009988.1-201ENST00000434988 PRXQ9BXM0 1461 aa12.63□□□□□ -0.39
AC009988.1-201ENST00000434988 LAMC3Q9Y6N6 1575 aa12.62□□□□□ -0.39
AC009988.1-201ENST00000434988 FANCD2Q9BXW9 1451 aa12.62□□□□□ -0.39
AC009988.1-201ENST00000434988 APLP2Q06481 763 aa12.62□□□□□ -0.39
AC009988.1-201ENST00000434988 CLIP1P30622 1438 aa12.62□□□□□ -0.39
AC009988.1-201ENST00000434988 PDS5BQ9NTI5 1447 aa12.59□□□□□ -0.39
AC009988.1-201ENST00000434988 RAPGEF2Q9Y4G8 1499 aa12.58□□□□□ -0.4
AC009988.1-201ENST00000434988 DNMBPQ6XZF7 1577 aa12.56□□□□□ -0.4
AC009988.1-201ENST00000434988 VPS8Q8N3P4 1428 aa12.54□□□□□ -0.4
AC009988.1-201ENST00000434988 IGF1RP08069 1367 aa12.54□□□□□ -0.4
AC009988.1-201ENST00000434988 CUX2O14529 1486 aa12.53□□□□□ -0.4
AC009988.1-201ENST00000434988 FGD5Q6ZNL6 1462 aa12.53□□□□□ -0.4
AC009988.1-201ENST00000434988 CARMIL1Q5VZK9 1371 aa12.51□□□□□ -0.41
AC009988.1-201ENST00000434988 ABCA10Q8WWZ4 1543 aa12.49□□□□□ -0.41
AC009988.1-201ENST00000434988 TOPBP1Q92547 1522 aa12.49□□□□□ -0.41
AC009988.1-201ENST00000434988 PPARGC1BQ86YN6 1023 aaKnown RBP12.44□□□□□ -0.42
AC009988.1-201ENST00000434988 POLA1P09884 1462 aaPredicted RBP12.43□□□□□ -0.42
AC009988.1-201ENST00000434988 NESP48681 1621 aa12.43□□□□□ -0.42
AC009988.1-201ENST00000434988 CUL7Q14999 1698 aa12.39□□□□□ -0.43
AC009988.1-201ENST00000434988 URB2Q14146 1524 aaKnown RBP12.37□□□□□ -0.43
AC009988.1-201ENST00000434988 CCER1Q8TC90 406 aaPredicted RBP12.37□□□□□ -0.43
AC009988.1-201ENST00000434988 FHAD1B1AJZ9 1412 aa12.37□□□□□ -0.43
AC009988.1-201ENST00000434988 ARAP1Q96P48 1450 aa12.36□□□□□ -0.43
AC009988.1-201ENST00000434988 RAD54L2Q9Y4B4 1467 aa12.36□□□□□ -0.43
AC009988.1-201ENST00000434988 RANGAP1P46060 587 aaPredicted RBP12.36□□□□□ -0.43
AC009988.1-201ENST00000434988 MAP3K1Q13233 1512 aa12.36□□□□□ -0.43
AC009988.1-201ENST00000434988 ARHGAP35Q9NRY4 1499 aa12.34□□□□□ -0.43
AC009988.1-201ENST00000434988 GAPVD1Q14C86 1478 aa12.33□□□□□ -0.44
AC009988.1-201ENST00000434988 MRC2Q9UBG0 1479 aa12.33□□□□□ -0.44
AC009988.1-201ENST00000434988 EFCAB5A4FU69 1503 aa12.32□□□□□ -0.44
AC009988.1-201ENST00000434988 WDR97A6NE52 1622 aa12.29□□□□□ -0.44
AC009988.1-201ENST00000434988 ABCA5Q8WWZ7 1642 aa12.28□□□□□ -0.44
AC009988.1-201ENST00000434988 TTBK1Q5TCY1 1321 aaPredicted RBP12.28□□□□□ -0.44
AC009988.1-201ENST00000434988 KIF21AQ7Z4S6 1674 aa12.27□□□□□ -0.45
AC009988.1-201ENST00000434988 TDRD9Q8NDG6 1382 aaKnown RBP12.27□□□□□ -0.45
AC009988.1-201ENST00000434988 AQRO60306 1485 aaKnown RBP eCLIP12.27□□□□□ -0.45
AC009988.1-201ENST00000434988 IFT140Q96RY7 1462 aa12.27□□□□□ -0.45
AC009988.1-201ENST00000434988 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.26□□□□□ -0.45
AC009988.1-201ENST00000434988 FMN1Q68DA7 1419 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms