RNA–Protein interactions for RNA: ENST00000434600.6

LAMP2-203, Transcript of lysosomal associated membrane protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMP2, Length 2,089 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP2-203ENST00000434600 NISCHQ9Y2I1 1504 aa31.61■■■□□ 2.65
LAMP2-203ENST00000434600 CCDC180Q9P1Z9 1646 aa27.68■■■□□ 2.02
LAMP2-203ENST00000434600 ABCC9O60706 1549 aa26.67■■□□□ 1.86
LAMP2-203ENST00000434600 ZCCHC6Q5VYS8 1495 aaKnown RBP26.47■■□□□ 1.83
LAMP2-203ENST00000434600 DCAF8L2P0C7V8 631 aa26.37■■□□□ 1.81
LAMP2-203ENST00000434600 DCAF1Q9Y4B6 1507 aa26.06■■□□□ 1.76
LAMP2-203ENST00000434600 NACADO15069 1562 aa25.89■■□□□ 1.73
LAMP2-203ENST00000434600 MYO15BQ96JP2 1530 aa25.88■■□□□ 1.73
LAMP2-203ENST00000434600 RB1CC1Q8TDY2 1594 aa25.78■■□□□ 1.72
LAMP2-203ENST00000434600 SHROOM4Q9ULL8 1493 aa25.66■■□□□ 1.7
LAMP2-203ENST00000434600 SCRIBQ14160 1630 aa25.52■■□□□ 1.68
LAMP2-203ENST00000434600 UNC13AQ9UPW8 1703 aa25.29■■□□□ 1.64
LAMP2-203ENST00000434600 PABPN1Q86U42 306 aaKnown RBP eCLIP25.11■■□□□ 1.61
LAMP2-203ENST00000434600 BICRAQ9NZM4 1560 aa25.06■■□□□ 1.6
LAMP2-203ENST00000434600 CECR2Q9BXF3 1484 aa24.67■■□□□ 1.54
LAMP2-203ENST00000434600 SUPT5HO00267 1087 aaKnown RBP24.47■■□□□ 1.51
LAMP2-203ENST00000434600 MROH2BQ7Z745 1585 aa24.45■■□□□ 1.51
LAMP2-203ENST00000434600 BAZ1AQ9NRL2 1556 aaPredicted RBP24.42■■□□□ 1.5
LAMP2-203ENST00000434600 RSF1Q96T23 1441 aaPredicted RBP24.4■■□□□ 1.5
LAMP2-203ENST00000434600 SMARCA4P51532 1647 aa24.39■■□□□ 1.49
LAMP2-203ENST00000434600 EIF4G1Q04637 1599 aaKnown RBP24.33■■□□□ 1.49
LAMP2-203ENST00000434600 WIZO95785 1651 aa24.24■■□□□ 1.47
LAMP2-203ENST00000434600 ATAD2BQ9ULI0 1458 aa24.09■■□□□ 1.45
LAMP2-203ENST00000434600 CC2D2AQ9P2K1 1620 aa24.08■■□□□ 1.45
LAMP2-203ENST00000434600 PEG3Q9GZU2 1588 aa24.06■■□□□ 1.44
LAMP2-203ENST00000434600 SMARCA2P51531 1590 aa24.02■■□□□ 1.44
LAMP2-203ENST00000434600 BAZ1BQ9UIG0 1483 aaKnown RBP23.93■■□□□ 1.42
LAMP2-203ENST00000434600 DNAJC5BQ9UF47 199 aa23.93■■□□□ 1.42
LAMP2-203ENST00000434600 TOP2AP11388 1531 aaKnown RBP23.92■■□□□ 1.42
LAMP2-203ENST00000434600 NCAPD3P42695 1498 aa23.92■■□□□ 1.42
LAMP2-203ENST00000434600 HMGXB3Q12766 1538 aa23.84■■□□□ 1.41
LAMP2-203ENST00000434600 CCDC88BA6NC98 1476 aa23.71■■□□□ 1.39
LAMP2-203ENST00000434600 CHIC1Q5VXU3 224 aa23.45■■□□□ 1.34
LAMP2-203ENST00000434600 NESP48681 1621 aa23.31■■□□□ 1.32
LAMP2-203ENST00000434600 CADPSQ9ULU8 1353 aa23.3■■□□□ 1.32
LAMP2-203ENST00000434600 CFTRP13569 1480 aa23.3■■□□□ 1.32
LAMP2-203ENST00000434600 LAMC3Q9Y6N6 1575 aa23.16■■□□□ 1.3
LAMP2-203ENST00000434600 ABCC8Q09428 1581 aa23.13■■□□□ 1.29
LAMP2-203ENST00000434600 PRDM2Q13029 1718 aa23.1■■□□□ 1.29
LAMP2-203ENST00000434600 FANCD2Q9BXW9 1451 aa23.06■■□□□ 1.28
LAMP2-203ENST00000434600 PDS5BQ9NTI5 1447 aa23■■□□□ 1.27
LAMP2-203ENST00000434600 TRIM41Q8WV44 630 aa22.97■■□□□ 1.27
LAMP2-203ENST00000434600 KIF21AQ7Z4S6 1674 aa22.97■■□□□ 1.27
LAMP2-203ENST00000434600 WRNQ14191 1432 aaPredicted RBP eCLIP22.97■■□□□ 1.27
LAMP2-203ENST00000434600 CEP164Q9UPV0 1460 aa22.94■■□□□ 1.26
LAMP2-203ENST00000434600 SYNJ1O43426 1573 aa22.92■■□□□ 1.26
LAMP2-203ENST00000434600 CUX1P39880 1505 aa22.88■■□□□ 1.25
LAMP2-203ENST00000434600 ERCC6Q03468 1493 aa22.87■■□□□ 1.25
LAMP2-203ENST00000434600 URB2Q14146 1524 aaKnown RBP22.81■■□□□ 1.24
LAMP2-203ENST00000434600 TOP2BQ02880 1626 aa22.81■■□□□ 1.24
LAMP2-203ENST00000434600 BIVM-ERCC5R4GMW8 1640 aa22.78■■□□□ 1.24
LAMP2-203ENST00000434600 TOPBP1Q92547 1522 aa22.76■■□□□ 1.23
LAMP2-203ENST00000434600 HRCP23327 699 aa22.75■■□□□ 1.23
LAMP2-203ENST00000434600 DNMBPQ6XZF7 1577 aa22.75■■□□□ 1.23
LAMP2-203ENST00000434600 MRC2Q9UBG0 1479 aa22.74■■□□□ 1.23
LAMP2-203ENST00000434600 FGD5Q6ZNL6 1462 aa22.69■■□□□ 1.22
LAMP2-203ENST00000434600 THOC2Q8NI27 1593 aaKnown RBP22.68■■□□□ 1.22
LAMP2-203ENST00000434600 POLA1P09884 1462 aaPredicted RBP22.64■■□□□ 1.21
LAMP2-203ENST00000434600 FAM9AQ8IZU1 332 aaPredicted RBP22.64■■□□□ 1.21
LAMP2-203ENST00000434600 PCGF6Q9BYE7 350 aa22.64■■□□□ 1.21
LAMP2-203ENST00000434600 WDR62O43379 1518 aa22.63■■□□□ 1.21
LAMP2-203ENST00000434600 LOC105371045A0A1W2PR82 267 aa22.63■■□□□ 1.21
LAMP2-203ENST00000434600 SOGA1O94964 1423 aa22.62■■□□□ 1.21
LAMP2-203ENST00000434600 RAD54L2Q9Y4B4 1467 aa22.6■■□□□ 1.21
LAMP2-203ENST00000434600 RUSC2Q8N2Y8 1516 aa22.57■■□□□ 1.2
LAMP2-203ENST00000434600 CUX2O14529 1486 aa22.52■■□□□ 1.2
LAMP2-203ENST00000434600 TARBP1Q13395 1621 aaKnown RBP22.45■■□□□ 1.18
LAMP2-203ENST00000434600 ABCA10Q8WWZ4 1543 aa22.44■■□□□ 1.18
LAMP2-203ENST00000434600 TDRD9Q8NDG6 1382 aaKnown RBP22.41■■□□□ 1.18
LAMP2-203ENST00000434600 WDR97A6NE52 1622 aa22.4■■□□□ 1.18
LAMP2-203ENST00000434600 EHMT2Q96KQ7 1210 aa22.4■■□□□ 1.18
LAMP2-203ENST00000434600 KIF27Q86VH2 1401 aa22.4■■□□□ 1.18
LAMP2-203ENST00000434600 IFT140Q96RY7 1462 aa22.39■■□□□ 1.17
LAMP2-203ENST00000434600 ZNF608Q9ULD9 1512 aaPredicted RBP22.37■■□□□ 1.17
LAMP2-203ENST00000434600 CSRNP3Q8WYN3 585 aa22.35■■□□□ 1.17
LAMP2-203ENST00000434600 EEA1Q15075 1411 aa22.35■■□□□ 1.17
LAMP2-203ENST00000434600 TRIM26Q12899 539 aaPredicted RBP22.35■■□□□ 1.17
LAMP2-203ENST00000434600 AQRO60306 1485 aaKnown RBP eCLIP22.34■■□□□ 1.17
LAMP2-203ENST00000434600 ABCA5Q8WWZ7 1642 aa22.3■■□□□ 1.16
LAMP2-203ENST00000434600 GAPVD1Q14C86 1478 aa22.29■■□□□ 1.16
LAMP2-203ENST00000434600 IGF1RP08069 1367 aa22.28■■□□□ 1.16
LAMP2-203ENST00000434600 EIF4G3O43432 1585 aaKnown RBP22.24■■□□□ 1.15
LAMP2-203ENST00000434600 PBRM1Q86U86 1689 aa22.18■■□□□ 1.14
LAMP2-203ENST00000434600 PRXQ9BXM0 1461 aa22.16■■□□□ 1.14
LAMP2-203ENST00000434600 RAPGEF2Q9Y4G8 1499 aa22.16■■□□□ 1.14
LAMP2-203ENST00000434600 GRIN2BQ13224 1484 aa22.15■■□□□ 1.14
LAMP2-203ENST00000434600 ERICH3Q5RHP9 1530 aa22.15■■□□□ 1.14
LAMP2-203ENST00000434600 CARMIL1Q5VZK9 1371 aa22.15■■□□□ 1.14
LAMP2-203ENST00000434600 KIF21BO75037 1637 aa22.12■■□□□ 1.13
LAMP2-203ENST00000434600 SNAPC4Q5SXM2 1469 aa22.1■■□□□ 1.13
LAMP2-203ENST00000434600 GOLGA3Q08378 1498 aa22.08■■□□□ 1.13
LAMP2-203ENST00000434600 PPARGC1BQ86YN6 1023 aaKnown RBP22.08■■□□□ 1.13
LAMP2-203ENST00000434600 UBTFP17480 764 aaKnown RBP22.08■■□□□ 1.12
LAMP2-203ENST00000434600 CUL7Q14999 1698 aa22.08■■□□□ 1.12
LAMP2-203ENST00000434600 ADAMTS12P58397 1594 aa22.04■■□□□ 1.12
LAMP2-203ENST00000434600 FHAD1B1AJZ9 1412 aa22.02■■□□□ 1.12
LAMP2-203ENST00000434600 MAGI1Q96QZ7 1491 aaPredicted RBP21.99■■□□□ 1.11
LAMP2-203ENST00000434600 FBLN2P98095 1184 aa21.99■■□□□ 1.11
LAMP2-203ENST00000434600 ZEB1P37275 1124 aaPredicted RBP21.96■■□□□ 1.11
LAMP2-203ENST00000434600 CHMP7Q8WUX9 453 aaPredicted RBP21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms