RNA–Protein interactions for RNA: ENST00000434583.5

TRNT1-208, Transcript of tRNA nucleotidyl transferase 1, humanhuman

TSL 2

Gene TRNT1, Length 1,871 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRNT1-208ENST00000434583 NISCHQ9Y2I1 1504 aa25.02■■□□□ 1.6
TRNT1-208ENST00000434583 ABCC9O60706 1549 aa23.02■■□□□ 1.28
TRNT1-208ENST00000434583 CCDC180Q9P1Z9 1646 aa22.72■■□□□ 1.23
TRNT1-208ENST00000434583 DNAJC5BQ9UF47 199 aa21.95■■□□□ 1.1
TRNT1-208ENST00000434583 RB1CC1Q8TDY2 1594 aa21.82■■□□□ 1.08
TRNT1-208ENST00000434583 NACADO15069 1562 aa21.57■■□□□ 1.04
TRNT1-208ENST00000434583 PABPN1Q86U42 306 aaKnown RBP eCLIP21.32■■□□□ 1
TRNT1-208ENST00000434583 UNC13AQ9UPW8 1703 aa21.31■■□□□ 1
TRNT1-208ENST00000434583 DCAF8L2P0C7V8 631 aa21.23■□□□□ 0.99
TRNT1-208ENST00000434583 MYO15BQ96JP2 1530 aa21.15■□□□□ 0.98
TRNT1-208ENST00000434583 BICRAQ9NZM4 1560 aa21.14■□□□□ 0.98
TRNT1-208ENST00000434583 SHROOM4Q9ULL8 1493 aa20.91■□□□□ 0.94
TRNT1-208ENST00000434583 CC2D2AQ9P2K1 1620 aa20.82■□□□□ 0.92
TRNT1-208ENST00000434583 CECR2Q9BXF3 1484 aa20.81■□□□□ 0.92
TRNT1-208ENST00000434583 DCAF1Q9Y4B6 1507 aa20.7■□□□□ 0.9
TRNT1-208ENST00000434583 EIF4G1Q04637 1599 aaKnown RBP20.66■□□□□ 0.9
TRNT1-208ENST00000434583 ZCCHC6Q5VYS8 1495 aaKnown RBP20.63■□□□□ 0.89
TRNT1-208ENST00000434583 DNAJC5Q9H3Z4 198 aa20.58■□□□□ 0.88
TRNT1-208ENST00000434583 SCRIBQ14160 1630 aa20.55■□□□□ 0.88
TRNT1-208ENST00000434583 CUX2O14529 1486 aa20.12■□□□□ 0.81
TRNT1-208ENST00000434583 ERCC6Q03468 1493 aa19.94■□□□□ 0.78
TRNT1-208ENST00000434583 NCAPD3P42695 1498 aa19.89■□□□□ 0.77
TRNT1-208ENST00000434583 ATAD2BQ9ULI0 1458 aa19.73■□□□□ 0.75
TRNT1-208ENST00000434583 HMGXB3Q12766 1538 aa19.71■□□□□ 0.75
TRNT1-208ENST00000434583 SMARCA2P51531 1590 aa19.7■□□□□ 0.74
TRNT1-208ENST00000434583 NESP48681 1621 aa19.63■□□□□ 0.73
TRNT1-208ENST00000434583 SMARCA4P51532 1647 aa19.61■□□□□ 0.73
TRNT1-208ENST00000434583 THOC2Q8NI27 1593 aaKnown RBP19.59■□□□□ 0.73
TRNT1-208ENST00000434583 LAMC3Q9Y6N6 1575 aa19.54■□□□□ 0.72
TRNT1-208ENST00000434583 BAZ1BQ9UIG0 1483 aaKnown RBP19.52■□□□□ 0.72
TRNT1-208ENST00000434583 BAZ1AQ9NRL2 1556 aaPredicted RBP19.47■□□□□ 0.71
TRNT1-208ENST00000434583 PEG3Q9GZU2 1588 aa19.46■□□□□ 0.71
TRNT1-208ENST00000434583 KIF21AQ7Z4S6 1674 aa19.43■□□□□ 0.7
TRNT1-208ENST00000434583 PDS5BQ9NTI5 1447 aa19.42■□□□□ 0.7
TRNT1-208ENST00000434583 TRIM41Q8WV44 630 aa19.41■□□□□ 0.7
TRNT1-208ENST00000434583 MRC2Q9UBG0 1479 aa19.26■□□□□ 0.67
TRNT1-208ENST00000434583 CADPSQ9ULU8 1353 aa19.24■□□□□ 0.67
TRNT1-208ENST00000434583 MROH2BQ7Z745 1585 aa19.23■□□□□ 0.67
TRNT1-208ENST00000434583 WDR62O43379 1518 aa19.23■□□□□ 0.67
TRNT1-208ENST00000434583 OSCARQ8IYS5 282 aa19.1■□□□□ 0.65
TRNT1-208ENST00000434583 CEP164Q9UPV0 1460 aa19.09■□□□□ 0.65
TRNT1-208ENST00000434583 FANCD2Q9BXW9 1451 aa19.01■□□□□ 0.63
TRNT1-208ENST00000434583 WIZO95785 1651 aa18.99■□□□□ 0.63
TRNT1-208ENST00000434583 CFTRP13569 1480 aa18.93■□□□□ 0.62
TRNT1-208ENST00000434583 RIMBP3CA6NJZ7 1639 aa18.88■□□□□ 0.61
TRNT1-208ENST00000434583 RIMBP3BA6NNM3 1639 aa18.88■□□□□ 0.61
TRNT1-208ENST00000434583 RIMBP3Q9UFD9 1639 aa18.88■□□□□ 0.61
TRNT1-208ENST00000434583 URB2Q14146 1524 aaKnown RBP18.86■□□□□ 0.61
TRNT1-208ENST00000434583 PRDM2Q13029 1718 aa18.79■□□□□ 0.6
TRNT1-208ENST00000434583 ARHGEF11O15085 1522 aa18.76■□□□□ 0.59
TRNT1-208ENST00000434583 TOP2AP11388 1531 aaKnown RBP18.75■□□□□ 0.59
TRNT1-208ENST00000434583 IFT140Q96RY7 1462 aa18.74■□□□□ 0.59
TRNT1-208ENST00000434583 ZNF608Q9ULD9 1512 aaPredicted RBP18.68■□□□□ 0.58
TRNT1-208ENST00000434583 RSF1Q96T23 1441 aaPredicted RBP18.67■□□□□ 0.58
TRNT1-208ENST00000434583 CYB5RLQ6IPT4 315 aa18.63■□□□□ 0.57
TRNT1-208ENST00000434583 ABCC8Q09428 1581 aa18.62■□□□□ 0.57
TRNT1-208ENST00000434583 TOPBP1Q92547 1522 aa18.61■□□□□ 0.57
TRNT1-208ENST00000434583 EIF4G3O43432 1585 aaKnown RBP18.6■□□□□ 0.57
TRNT1-208ENST00000434583 TRHP20396 242 aaPredicted RBP18.57■□□□□ 0.56
TRNT1-208ENST00000434583 CHD1O14646 1710 aa18.57■□□□□ 0.56
TRNT1-208ENST00000434583 ARAP1Q96P48 1450 aa18.53■□□□□ 0.56
TRNT1-208ENST00000434583 DNMBPQ6XZF7 1577 aa18.52■□□□□ 0.56
TRNT1-208ENST00000434583 CCDC88BA6NC98 1476 aa18.51■□□□□ 0.55
TRNT1-208ENST00000434583 TARBP1Q13395 1621 aaKnown RBP18.49■□□□□ 0.55
TRNT1-208ENST00000434583 AQRO60306 1485 aaKnown RBP eCLIP18.46■□□□□ 0.553e-9■■■■■ 37.1
TRNT1-208ENST00000434583 FBLN2P98095 1184 aa18.43■□□□□ 0.54
TRNT1-208ENST00000434583 AEBP2Q6ZN18 517 aaPredicted RBP18.4■□□□□ 0.54
TRNT1-208ENST00000434583 POLA1P09884 1462 aaPredicted RBP18.37■□□□□ 0.53
TRNT1-208ENST00000434583 WDR97A6NE52 1622 aa18.35■□□□□ 0.53
TRNT1-208ENST00000434583 CLASP1Q7Z460 1538 aa18.33■□□□□ 0.53
TRNT1-208ENST00000434583 SYNJ1O43426 1573 aa18.31■□□□□ 0.52
TRNT1-208ENST00000434583 SOGA1O94964 1423 aa18.3■□□□□ 0.52
TRNT1-208ENST00000434583 RAD54L2Q9Y4B4 1467 aa18.28■□□□□ 0.52
TRNT1-208ENST00000434583 SNAPC4Q5SXM2 1469 aa18.27■□□□□ 0.52
TRNT1-208ENST00000434583 TDRD9Q8NDG6 1382 aaKnown RBP18.27■□□□□ 0.52
TRNT1-208ENST00000434583 MAGI1Q96QZ7 1491 aaPredicted RBP18.27■□□□□ 0.52
TRNT1-208ENST00000434583 CHMP7Q8WUX9 453 aaPredicted RBP18.26■□□□□ 0.51
TRNT1-208ENST00000434583 GRIN2BQ13224 1484 aa18.2■□□□□ 0.5
TRNT1-208ENST00000434583 SYNJ2O15056 1496 aa18.2■□□□□ 0.5
TRNT1-208ENST00000434583 FGD5Q6ZNL6 1462 aa18.19■□□□□ 0.5
TRNT1-208ENST00000434583 GAPVD1Q14C86 1478 aa18.16■□□□□ 0.5
TRNT1-208ENST00000434583 PBRM1Q86U86 1689 aa18.12■□□□□ 0.49
TRNT1-208ENST00000434583 CUX1P39880 1505 aa18.1■□□□□ 0.49
TRNT1-208ENST00000434583 ABCA5Q8WWZ7 1642 aa18■□□□□ 0.47
TRNT1-208ENST00000434583 ABCA10Q8WWZ4 1543 aa17.99■□□□□ 0.47
TRNT1-208ENST00000434583 GRIN2AQ12879 1464 aa17.96■□□□□ 0.47
TRNT1-208ENST00000434583 ERCC6L2Q5T890 1561 aa17.95■□□□□ 0.46
TRNT1-208ENST00000434583 CEP170Q5SW79 1584 aa17.95■□□□□ 0.46
TRNT1-208ENST00000434583 KIF13AQ9H1H9 1805 aa17.93■□□□□ 0.46
TRNT1-208ENST00000434583 NUP160Q12769 1436 aa17.92■□□□□ 0.46
TRNT1-208ENST00000434583 SHROOM2Q13796 1616 aa17.92■□□□□ 0.46
TRNT1-208ENST00000434583 ADAMTS12P58397 1594 aa17.89■□□□□ 0.45
TRNT1-208ENST00000434583 FHAD1B1AJZ9 1412 aa17.84■□□□□ 0.45
TRNT1-208ENST00000434583 WRNQ14191 1432 aaPredicted RBP eCLIP17.83■□□□□ 0.45
TRNT1-208ENST00000434583 ERICH3Q5RHP9 1530 aa17.78■□□□□ 0.44
TRNT1-208ENST00000434583 PRG4Q92954 1404 aaPredicted RBP17.77■□□□□ 0.43
TRNT1-208ENST00000434583 ABCC10Q5T3U5 1492 aa17.76■□□□□ 0.43
TRNT1-208ENST00000434583 BIVM-ERCC5R4GMW8 1640 aa17.75■□□□□ 0.43
TRNT1-208ENST00000434583 NPM1P06748 294 aaKnown RBP eCLIP17.75■□□□□ 0.43
TRNT1-208ENST00000434583 FAM69CQ0P6D2 419 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms