RNA–Protein interactions for RNA: ENST00000434476.6

SCRN1-207, Transcript of secernin 1, humanhuman

TSL 2 BASIC

Gene SCRN1, Length 1,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-207ENST00000434476 NISCHQ9Y2I1 1504 aa28.43■■■□□ 2.14
SCRN1-207ENST00000434476 CCDC180Q9P1Z9 1646 aa24.45■■□□□ 1.5
SCRN1-207ENST00000434476 ZCCHC6Q5VYS8 1495 aaKnown RBP23.98■■□□□ 1.43
SCRN1-207ENST00000434476 SHROOM4Q9ULL8 1493 aa23.58■■□□□ 1.37
SCRN1-207ENST00000434476 DCAF1Q9Y4B6 1507 aa23.52■■□□□ 1.36
SCRN1-207ENST00000434476 DCAF8L2P0C7V8 631 aa23.34■■□□□ 1.33
SCRN1-207ENST00000434476 MYO15BQ96JP2 1530 aa23.04■■□□□ 1.28
SCRN1-207ENST00000434476 SUPT5HO00267 1087 aaKnown RBP23.03■■□□□ 1.28
SCRN1-207ENST00000434476 NACADO15069 1562 aa22.7■■□□□ 1.22
SCRN1-207ENST00000434476 ABCC9O60706 1549 aa22.65■■□□□ 1.22
SCRN1-207ENST00000434476 SCRIBQ14160 1630 aa22.56■■□□□ 1.2
SCRN1-207ENST00000434476 CHIC1Q5VXU3 224 aa22.39■■□□□ 1.17
SCRN1-207ENST00000434476 RB1CC1Q8TDY2 1594 aa22.35■■□□□ 1.17
SCRN1-207ENST00000434476 RSF1Q96T23 1441 aaPredicted RBP22.3■■□□□ 1.16
SCRN1-207ENST00000434476 CECR2Q9BXF3 1484 aa22.04■■□□□ 1.12
SCRN1-207ENST00000434476 MROH2BQ7Z745 1585 aa21.97■■□□□ 1.11
SCRN1-207ENST00000434476 BAZ1AQ9NRL2 1556 aaPredicted RBP21.89■■□□□ 1.09
SCRN1-207ENST00000434476 UNC13AQ9UPW8 1703 aa21.81■■□□□ 1.08
SCRN1-207ENST00000434476 WIZO95785 1651 aa21.78■■□□□ 1.08
SCRN1-207ENST00000434476 SMARCA4P51532 1647 aa21.69■■□□□ 1.06
SCRN1-207ENST00000434476 BICRAQ9NZM4 1560 aa21.65■■□□□ 1.06
SCRN1-207ENST00000434476 TRIM41Q8WV44 630 aa21.64■■□□□ 1.06
SCRN1-207ENST00000434476 TOP2AP11388 1531 aaKnown RBP21.6■■□□□ 1.05
SCRN1-207ENST00000434476 LOC105371045A0A1W2PR82 267 aa21.54■■□□□ 1.04
SCRN1-207ENST00000434476 PABPN1Q86U42 306 aaKnown RBP eCLIP21.53■■□□□ 1.04
SCRN1-207ENST00000434476 CCDC88BA6NC98 1476 aa21.44■■□□□ 1.02
SCRN1-207ENST00000434476 EIF4G1Q04637 1599 aaKnown RBP21.43■■□□□ 1.02
SCRN1-207ENST00000434476 PEG3Q9GZU2 1588 aa21.43■■□□□ 1.02
SCRN1-207ENST00000434476 SMARCA2P51531 1590 aa21.41■■□□□ 1.02
SCRN1-207ENST00000434476 ATAD2BQ9ULI0 1458 aa21.24■□□□□ 0.99
SCRN1-207ENST00000434476 FAM9AQ8IZU1 332 aaPredicted RBP21.22■□□□□ 0.99
SCRN1-207ENST00000434476 PCGF6Q9BYE7 350 aa21.16■□□□□ 0.98
SCRN1-207ENST00000434476 BAZ1BQ9UIG0 1483 aaKnown RBP21.14■□□□□ 0.97
SCRN1-207ENST00000434476 ABCC8Q09428 1581 aa21.1■□□□□ 0.97
SCRN1-207ENST00000434476 TRIM26Q12899 539 aaPredicted RBP21.07■□□□□ 0.96
SCRN1-207ENST00000434476 HRCP23327 699 aa21.06■□□□□ 0.96
SCRN1-207ENST00000434476 EEA1Q15075 1411 aa21.01■□□□□ 0.95
SCRN1-207ENST00000434476 NCAPD3P42695 1498 aa20.99■□□□□ 0.95
SCRN1-207ENST00000434476 WRNQ14191 1432 aaPredicted RBP eCLIP20.97■□□□□ 0.95
SCRN1-207ENST00000434476 AEBP2Q6ZN18 517 aaPredicted RBP20.95■□□□□ 0.94
SCRN1-207ENST00000434476 HMGXB3Q12766 1538 aa20.95■□□□□ 0.94
SCRN1-207ENST00000434476 SOGA1O94964 1423 aa20.89■□□□□ 0.93
SCRN1-207ENST00000434476 CSRNP3Q8WYN3 585 aa20.87■□□□□ 0.93
SCRN1-207ENST00000434476 EHMT2Q96KQ7 1210 aa20.86■□□□□ 0.93
SCRN1-207ENST00000434476 TNIKQ9UKE5 1360 aa20.8■□□□□ 0.92
SCRN1-207ENST00000434476 SYNJ1O43426 1573 aa20.79■□□□□ 0.92
SCRN1-207ENST00000434476 RUSC2Q8N2Y8 1516 aa20.76■□□□□ 0.91
SCRN1-207ENST00000434476 GOLGA3Q08378 1498 aa20.7■□□□□ 0.91
SCRN1-207ENST00000434476 TOP2BQ02880 1626 aa20.69■□□□□ 0.9
SCRN1-207ENST00000434476 CEP162Q5TB80 1403 aa20.67■□□□□ 0.9
SCRN1-207ENST00000434476 CFTRP13569 1480 aa20.66■□□□□ 0.9
SCRN1-207ENST00000434476 CEP164Q9UPV0 1460 aa20.65■□□□□ 0.9
SCRN1-207ENST00000434476 UBTFP17480 764 aaKnown RBP20.63■□□□□ 0.89
SCRN1-207ENST00000434476 KIF21BO75037 1637 aa20.63■□□□□ 0.89
SCRN1-207ENST00000434476 BIVM-ERCC5R4GMW8 1640 aa20.63■□□□□ 0.89
SCRN1-207ENST00000434476 ZEB1P37275 1124 aaPredicted RBP20.57■□□□□ 0.88
SCRN1-207ENST00000434476 CUX1P39880 1505 aa20.5■□□□□ 0.87
SCRN1-207ENST00000434476 CADPSQ9ULU8 1353 aa20.5■□□□□ 0.87
SCRN1-207ENST00000434476 CC2D2AQ9P2K1 1620 aa20.49■□□□□ 0.87
SCRN1-207ENST00000434476 PRDM2Q13029 1718 aa20.46■□□□□ 0.87
SCRN1-207ENST00000434476 PPARGC1BQ86YN6 1023 aaKnown RBP20.43■□□□□ 0.86
SCRN1-207ENST00000434476 RAPGEF2Q9Y4G8 1499 aa20.41■□□□□ 0.86
SCRN1-207ENST00000434476 ERICH3Q5RHP9 1530 aa20.41■□□□□ 0.86
SCRN1-207ENST00000434476 PRXQ9BXM0 1461 aa20.41■□□□□ 0.86
SCRN1-207ENST00000434476 CLIP1P30622 1438 aa20.4■□□□□ 0.86
SCRN1-207ENST00000434476 KIF27Q86VH2 1401 aa20.4■□□□□ 0.86
SCRN1-207ENST00000434476 VPS8Q8N3P4 1428 aa20.3■□□□□ 0.84
SCRN1-207ENST00000434476 FANCD2Q9BXW9 1451 aa20.23■□□□□ 0.83
SCRN1-207ENST00000434476 IGF1RP08069 1367 aa20.19■□□□□ 0.82
SCRN1-207ENST00000434476 CUX2O14529 1486 aa20.19■□□□□ 0.82
SCRN1-207ENST00000434476 FGD5Q6ZNL6 1462 aa20.19■□□□□ 0.82
SCRN1-207ENST00000434476 APLP2Q06481 763 aa20.18■□□□□ 0.82
SCRN1-207ENST00000434476 DNMBPQ6XZF7 1577 aa20.14■□□□□ 0.81
SCRN1-207ENST00000434476 LAMC3Q9Y6N6 1575 aa20.13■□□□□ 0.81
SCRN1-207ENST00000434476 TTBK1Q5TCY1 1321 aaPredicted RBP20.12■□□□□ 0.81
SCRN1-207ENST00000434476 CCER1Q8TC90 406 aaPredicted RBP20.11■□□□□ 0.81
SCRN1-207ENST00000434476 ARAP1Q96P48 1450 aa20.1■□□□□ 0.81
SCRN1-207ENST00000434476 CARMIL1Q5VZK9 1371 aa20.09■□□□□ 0.81
SCRN1-207ENST00000434476 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.08■□□□□ 0.81
SCRN1-207ENST00000434476 TOPBP1Q92547 1522 aa20.08■□□□□ 0.8
SCRN1-207ENST00000434476 RANGAP1P46060 587 aaPredicted RBP20.06■□□□□ 0.8
SCRN1-207ENST00000434476 NESP48681 1621 aa20.06■□□□□ 0.8
SCRN1-207ENST00000434476 ABCA10Q8WWZ4 1543 aa20.05■□□□□ 0.8
SCRN1-207ENST00000434476 POLA1P09884 1462 aaPredicted RBP20.01■□□□□ 0.79
SCRN1-207ENST00000434476 PDS5BQ9NTI5 1447 aa20.01■□□□□ 0.79
SCRN1-207ENST00000434476 ARHGAP35Q9NRY4 1499 aa20■□□□□ 0.79
SCRN1-207ENST00000434476 RAD54L2Q9Y4B4 1467 aa19.96■□□□□ 0.79
SCRN1-207ENST00000434476 URB2Q14146 1524 aaKnown RBP19.93■□□□□ 0.78
SCRN1-207ENST00000434476 CUL7Q14999 1698 aa19.88■□□□□ 0.77
SCRN1-207ENST00000434476 MAP3K1Q13233 1512 aa19.88■□□□□ 0.77
SCRN1-207ENST00000434476 HNRNPUL2Q1KMD3 747 aaKnown RBP19.86■□□□□ 0.77
SCRN1-207ENST00000434476 KANK4Q5T7N3 995 aaPredicted RBP19.86■□□□□ 0.77
SCRN1-207ENST00000434476 WDR97A6NE52 1622 aa19.84■□□□□ 0.77
SCRN1-207ENST00000434476 DNAJC5BQ9UF47 199 aa19.84■□□□□ 0.77
SCRN1-207ENST00000434476 FHAD1B1AJZ9 1412 aa19.82■□□□□ 0.76
SCRN1-207ENST00000434476 RRBP1Q9P2E9 1410 aaKnown RBP19.81■□□□□ 0.76
SCRN1-207ENST00000434476 ABCA5Q8WWZ7 1642 aa19.78■□□□□ 0.76
SCRN1-207ENST00000434476 EFCAB5A4FU69 1503 aa19.78■□□□□ 0.76
SCRN1-207ENST00000434476 GAPVD1Q14C86 1478 aa19.76■□□□□ 0.75
SCRN1-207ENST00000434476 KIF21AQ7Z4S6 1674 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms