RNA–Protein interactions for RNA: ENST00000430789.1

AFF3-209, Transcript of AF4/FMR2 family member 3, humanhuman

TSL 3

Gene AFF3, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-209ENST00000430789 NISCHQ9Y2I1 1504 aa15.23■□□□□ 0.03
AFF3-209ENST00000430789 ABCC9O60706 1549 aa14.05□□□□□ -0.16
AFF3-209ENST00000430789 CCDC180Q9P1Z9 1646 aa13.72□□□□□ -0.21
AFF3-209ENST00000430789 DNAJC5BQ9UF47 199 aa13.57□□□□□ -0.24
AFF3-209ENST00000430789 RB1CC1Q8TDY2 1594 aa13.22□□□□□ -0.29
AFF3-209ENST00000430789 NACADO15069 1562 aa13.09□□□□□ -0.31
AFF3-209ENST00000430789 PABPN1Q86U42 306 aaKnown RBP eCLIP13.08□□□□□ -0.32
AFF3-209ENST00000430789 DCAF8L2P0C7V8 631 aa12.94□□□□□ -0.34
AFF3-209ENST00000430789 BICRAQ9NZM4 1560 aa12.91□□□□□ -0.34
AFF3-209ENST00000430789 UNC13AQ9UPW8 1703 aa12.88□□□□□ -0.35
AFF3-209ENST00000430789 MYO15BQ96JP2 1530 aa12.86□□□□□ -0.35
AFF3-209ENST00000430789 CECR2Q9BXF3 1484 aa12.7□□□□□ -0.38
AFF3-209ENST00000430789 SHROOM4Q9ULL8 1493 aa12.67□□□□□ -0.38
AFF3-209ENST00000430789 CC2D2AQ9P2K1 1620 aa12.66□□□□□ -0.38
AFF3-209ENST00000430789 DNAJC5Q9H3Z4 198 aa12.65□□□□□ -0.38
AFF3-209ENST00000430789 EIF4G1Q04637 1599 aaKnown RBP12.58□□□□□ -0.4
AFF3-209ENST00000430789 DCAF1Q9Y4B6 1507 aa12.57□□□□□ -0.4
AFF3-209ENST00000430789 AEBP2Q6ZN18 517 aaPredicted RBP12.57□□□□□ -0.4
AFF3-209ENST00000430789 ZCCHC6Q5VYS8 1495 aaKnown RBP12.55□□□□□ -0.4
AFF3-209ENST00000430789 SCRIBQ14160 1630 aa12.48□□□□□ -0.41
AFF3-209ENST00000430789 CUX2O14529 1486 aa12.24□□□□□ -0.45
AFF3-209ENST00000430789 NCAPD3P42695 1498 aa12.14□□□□□ -0.47
AFF3-209ENST00000430789 ERCC6Q03468 1493 aa12.11□□□□□ -0.47
AFF3-209ENST00000430789 ATAD2BQ9ULI0 1458 aa12.04□□□□□ -0.48
AFF3-209ENST00000430789 NESP48681 1621 aa12.01□□□□□ -0.49
AFF3-209ENST00000430789 HMGXB3Q12766 1538 aa11.96□□□□□ -0.49
AFF3-209ENST00000430789 SMARCA2P51531 1590 aa11.94□□□□□ -0.5
AFF3-209ENST00000430789 THOC2Q8NI27 1593 aaKnown RBP11.91□□□□□ -0.5
AFF3-209ENST00000430789 SMARCA4P51532 1647 aa11.89□□□□□ -0.51
AFF3-209ENST00000430789 TRIM41Q8WV44 630 aa11.87□□□□□ -0.51
AFF3-209ENST00000430789 BAZ1BQ9UIG0 1483 aaKnown RBP11.85□□□□□ -0.51
AFF3-209ENST00000430789 LAMC3Q9Y6N6 1575 aa11.84□□□□□ -0.51
AFF3-209ENST00000430789 PEG3Q9GZU2 1588 aa11.83□□□□□ -0.52
AFF3-209ENST00000430789 PDS5BQ9NTI5 1447 aa11.81□□□□□ -0.52
AFF3-209ENST00000430789 BAZ1AQ9NRL2 1556 aaPredicted RBP11.8□□□□□ -0.52
AFF3-209ENST00000430789 KIF21AQ7Z4S6 1674 aa11.76□□□□□ -0.53
AFF3-209ENST00000430789 CADPSQ9ULU8 1353 aa11.75□□□□□ -0.53
AFF3-209ENST00000430789 MROH2BQ7Z745 1585 aa11.73□□□□□ -0.53
AFF3-209ENST00000430789 MRC2Q9UBG0 1479 aa11.71□□□□□ -0.53
AFF3-209ENST00000430789 WDR62O43379 1518 aa11.7□□□□□ -0.54
AFF3-209ENST00000430789 OSCARQ8IYS5 282 aa11.67□□□□□ -0.54
AFF3-209ENST00000430789 CEP164Q9UPV0 1460 aa11.59□□□□□ -0.55
AFF3-209ENST00000430789 FANCD2Q9BXW9 1451 aa11.57□□□□□ -0.56
AFF3-209ENST00000430789 CHIC1Q5VXU3 224 aa11.57□□□□□ -0.56
AFF3-209ENST00000430789 CFTRP13569 1480 aa11.56□□□□□ -0.56
AFF3-209ENST00000430789 WIZO95785 1651 aa11.52□□□□□ -0.56
AFF3-209ENST00000430789 URB2Q14146 1524 aaKnown RBP11.52□□□□□ -0.57
AFF3-209ENST00000430789 RIMBP3CA6NJZ7 1639 aa11.48□□□□□ -0.57
AFF3-209ENST00000430789 RIMBP3BA6NNM3 1639 aa11.48□□□□□ -0.57
AFF3-209ENST00000430789 RIMBP3Q9UFD9 1639 aa11.48□□□□□ -0.57
AFF3-209ENST00000430789 ARHGEF11O15085 1522 aa11.44□□□□□ -0.58
AFF3-209ENST00000430789 ZNF608Q9ULD9 1512 aaPredicted RBP11.43□□□□□ -0.58
AFF3-209ENST00000430789 RSF1Q96T23 1441 aaPredicted RBP11.42□□□□□ -0.58
AFF3-209ENST00000430789 CYB5RLQ6IPT4 315 aa11.4□□□□□ -0.58
AFF3-209ENST00000430789 IFT140Q96RY7 1462 aa11.39□□□□□ -0.59
AFF3-209ENST00000430789 TOP2AP11388 1531 aaKnown RBP11.37□□□□□ -0.59
AFF3-209ENST00000430789 ARAP1Q96P48 1450 aa11.32□□□□□ -0.6
AFF3-209ENST00000430789 TOPBP1Q92547 1522 aa11.32□□□□□ -0.6
AFF3-209ENST00000430789 TRHP20396 242 aaPredicted RBP11.32□□□□□ -0.6
AFF3-209ENST00000430789 CCDC88BA6NC98 1476 aa11.29□□□□□ -0.6
AFF3-209ENST00000430789 AQRO60306 1485 aaKnown RBP eCLIP11.29□□□□□ -0.6
AFF3-209ENST00000430789 EIF4G3O43432 1585 aaKnown RBP11.28□□□□□ -0.6
AFF3-209ENST00000430789 ABCC8Q09428 1581 aa11.27□□□□□ -0.61
AFF3-209ENST00000430789 TARBP1Q13395 1621 aaKnown RBP11.25□□□□□ -0.61
AFF3-209ENST00000430789 PRDM2Q13029 1718 aa11.25□□□□□ -0.61
AFF3-209ENST00000430789 DNMBPQ6XZF7 1577 aa11.23□□□□□ -0.61
AFF3-209ENST00000430789 CHD1O14646 1710 aa11.22□□□□□ -0.61
AFF3-209ENST00000430789 FBLN2P98095 1184 aa11.22□□□□□ -0.61
AFF3-209ENST00000430789 POLA1P09884 1462 aaPredicted RBP11.2□□□□□ -0.62
AFF3-209ENST00000430789 TDRD9Q8NDG6 1382 aaKnown RBP11.17□□□□□ -0.62
AFF3-209ENST00000430789 CLASP1Q7Z460 1538 aa11.17□□□□□ -0.62
AFF3-209ENST00000430789 RAD54L2Q9Y4B4 1467 aa11.17□□□□□ -0.62
AFF3-209ENST00000430789 SOGA1O94964 1423 aa11.15□□□□□ -0.62
AFF3-209ENST00000430789 SNAPC4Q5SXM2 1469 aa11.12□□□□□ -0.63
AFF3-209ENST00000430789 CHMP7Q8WUX9 453 aaPredicted RBP11.12□□□□□ -0.63
AFF3-209ENST00000430789 MAGI1Q96QZ7 1491 aaPredicted RBP11.09□□□□□ -0.63
AFF3-209ENST00000430789 SYNJ1O43426 1573 aa11.08□□□□□ -0.64
AFF3-209ENST00000430789 WDR97A6NE52 1622 aa11.08□□□□□ -0.64
AFF3-209ENST00000430789 GRIN2BQ13224 1484 aa11.07□□□□□ -0.64
AFF3-209ENST00000430789 SYNJ2O15056 1496 aa11.06□□□□□ -0.64
AFF3-209ENST00000430789 GAPVD1Q14C86 1478 aa11.06□□□□□ -0.64
AFF3-209ENST00000430789 FGD5Q6ZNL6 1462 aa11.06□□□□□ -0.64
AFF3-209ENST00000430789 CUX1P39880 1505 aa11.04□□□□□ -0.64
AFF3-209ENST00000430789 ERCC6L2Q5T890 1561 aa10.98□□□□□ -0.65
AFF3-209ENST00000430789 ABCA10Q8WWZ4 1543 aa10.94□□□□□ -0.66
AFF3-209ENST00000430789 NUP160Q12769 1436 aa10.94□□□□□ -0.66
AFF3-209ENST00000430789 GRIN2AQ12879 1464 aa10.93□□□□□ -0.66
AFF3-209ENST00000430789 PBRM1Q86U86 1689 aa10.92□□□□□ -0.66
AFF3-209ENST00000430789 ABCA5Q8WWZ7 1642 aa10.91□□□□□ -0.66
AFF3-209ENST00000430789 CEP170Q5SW79 1584 aa10.91□□□□□ -0.66
AFF3-209ENST00000430789 SHROOM2Q13796 1616 aa10.88□□□□□ -0.67
AFF3-209ENST00000430789 KDM4FA0A1W2PPD8 638 aa10.86□□□□□ -0.67
AFF3-209ENST00000430789 FHAD1B1AJZ9 1412 aa10.85□□□□□ -0.67
AFF3-209ENST00000430789 KIF13AQ9H1H9 1805 aa10.85□□□□□ -0.67
AFF3-209ENST00000430789 ADAMTS12P58397 1594 aa10.85□□□□□ -0.67
AFF3-209ENST00000430789 WRNQ14191 1432 aaPredicted RBP eCLIP10.84□□□□□ -0.67
AFF3-209ENST00000430789 JPH4Q96JJ6 628 aa10.84□□□□□ -0.67
AFF3-209ENST00000430789 ABCC10Q5T3U5 1492 aa10.83□□□□□ -0.68
AFF3-209ENST00000430789 FAM69CQ0P6D2 419 aa10.83□□□□□ -0.68
AFF3-209ENST00000430789 PRG4Q92954 1404 aaPredicted RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 254.1 ms