RNA–Protein interactions for RNA: ENST00000430446.2

BUD23-207, Transcript of BUD23, rRNA methyltransferase and ribosome maturation factor, humanhuman

TSL 3

Gene BUD23, Length 738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BUD23-207ENST00000430446 AEBP2Q6ZN18 517 aaPredicted RBP33.18■■■□□ 2.9
BUD23-207ENST00000430446 CHIC1Q5VXU3 224 aa32.73■■■□□ 2.83
BUD23-207ENST00000430446 NISCHQ9Y2I1 1504 aa31.52■■■□□ 2.64
BUD23-207ENST00000430446 PHF23Q9BUL5 403 aaPredicted RBP28.84■■■□□ 2.21
BUD23-207ENST00000430446 CCDC180Q9P1Z9 1646 aa28.22■■■□□ 2.11
BUD23-207ENST00000430446 SENP3Q9H4L4 574 aaPredicted RBP28.06■■■□□ 2.08
BUD23-207ENST00000430446 ABCC9O60706 1549 aa27.86■■■□□ 2.05
BUD23-207ENST00000430446 RB1CC1Q8TDY2 1594 aa26.71■■□□□ 1.87
BUD23-207ENST00000430446 PLPPR3Q6T4P5 718 aa26.71■■□□□ 1.87
BUD23-207ENST00000430446 NACADO15069 1562 aa26.59■■□□□ 1.85
BUD23-207ENST00000430446 DCAF8L2P0C7V8 631 aa26.54■■□□□ 1.84
BUD23-207ENST00000430446 MYO15BQ96JP2 1530 aa26.29■■□□□ 1.8
BUD23-207ENST00000430446 ZCCHC6Q5VYS8 1495 aaKnown RBP26.19■■□□□ 1.78
BUD23-207ENST00000430446 DCAF1Q9Y4B6 1507 aa26.07■■□□□ 1.76
BUD23-207ENST00000430446 UNC13AQ9UPW8 1703 aa26.06■■□□□ 1.76
BUD23-207ENST00000430446 FOXD1Q16676 465 aa26■■□□□ 1.75
BUD23-207ENST00000430446 PABPN1Q86U42 306 aaKnown RBP eCLIP25.96■■□□□ 1.756e-6■■□□□ 12
BUD23-207ENST00000430446 BICRAQ9NZM4 1560 aa25.8■■□□□ 1.72
BUD23-207ENST00000430446 SCRIBQ14160 1630 aa25.71■■□□□ 1.71
BUD23-207ENST00000430446 DNAJC5BQ9UF47 199 aa25.71■■□□□ 1.71
BUD23-207ENST00000430446 SHROOM4Q9ULL8 1493 aa25.6■■□□□ 1.69
BUD23-207ENST00000430446 PPP6R1Q9UPN7 881 aa25.31■■□□□ 1.64
BUD23-207ENST00000430446 ADRA2BP18089 450 aa25.26■■□□□ 1.63
BUD23-207ENST00000430446 EIF4G1Q04637 1599 aaKnown RBP25.22■■□□□ 1.63
BUD23-207ENST00000430446 CC2D2AQ9P2K1 1620 aa25.19■■□□□ 1.62
BUD23-207ENST00000430446 CECR2Q9BXF3 1484 aa25.08■■□□□ 1.6
BUD23-207ENST00000430446 PIAS4Q8N2W9 510 aaPredicted RBP24.57■■□□□ 1.52
BUD23-207ENST00000430446 SMARCA4P51532 1647 aa24.55■■□□□ 1.52
BUD23-207ENST00000430446 BAZ1AQ9NRL2 1556 aaPredicted RBP24.5■■□□□ 1.51
BUD23-207ENST00000430446 NCAPD3P42695 1498 aa24.48■■□□□ 1.51
BUD23-207ENST00000430446 SMARCA2P51531 1590 aa24.48■■□□□ 1.51
BUD23-207ENST00000430446 ATAD2BQ9ULI0 1458 aa24.45■■□□□ 1.51
BUD23-207ENST00000430446 HMGXB3Q12766 1538 aa24.37■■□□□ 1.49
BUD23-207ENST00000430446 BAZ1BQ9UIG0 1483 aaKnown RBP24.31■■□□□ 1.48
BUD23-207ENST00000430446 PEG3Q9GZU2 1588 aa24.29■■□□□ 1.48
BUD23-207ENST00000430446 MROH2BQ7Z745 1585 aa24.26■■□□□ 1.47
BUD23-207ENST00000430446 ERCC6Q03468 1493 aa24.11■■□□□ 1.45
BUD23-207ENST00000430446 WIZO95785 1651 aa24.02■■□□□ 1.44
BUD23-207ENST00000430446 NESP48681 1621 aa23.97■■□□□ 1.43
BUD23-207ENST00000430446 LAMC3Q9Y6N6 1575 aa23.95■■□□□ 1.42
BUD23-207ENST00000430446 CUX2O14529 1486 aa23.91■■□□□ 1.42
BUD23-207ENST00000430446 RSF1Q96T23 1441 aaPredicted RBP23.87■■□□□ 1.41
BUD23-207ENST00000430446 MSH5O43196 834 aa23.83■■□□□ 1.41
BUD23-207ENST00000430446 PDS5BQ9NTI5 1447 aa23.81■■□□□ 1.4
BUD23-207ENST00000430446 CADPSQ9ULU8 1353 aa23.78■■□□□ 1.4
BUD23-207ENST00000430446 TOP2AP11388 1531 aaKnown RBP23.77■■□□□ 1.4
BUD23-207ENST00000430446 KIF21AQ7Z4S6 1674 aa23.75■■□□□ 1.39
BUD23-207ENST00000430446 THOC2Q8NI27 1593 aaKnown RBP23.7■■□□□ 1.38
BUD23-207ENST00000430446 MRC2Q9UBG0 1479 aa23.56■■□□□ 1.36
BUD23-207ENST00000430446 PPP4R3CPQ6ZMV5 832 aa23.56■■□□□ 1.36
BUD23-207ENST00000430446 CFTRP13569 1480 aa23.56■■□□□ 1.36
BUD23-207ENST00000430446 CEP164Q9UPV0 1460 aa23.55■■□□□ 1.36
BUD23-207ENST00000430446 FANCD2Q9BXW9 1451 aa23.52■■□□□ 1.36
BUD23-207ENST00000430446 WDR62O43379 1518 aa23.48■■□□□ 1.35
BUD23-207ENST00000430446 DNAJC5Q9H3Z4 198 aa23.47■■□□□ 1.35
BUD23-207ENST00000430446 PRDM2Q13029 1718 aa23.45■■□□□ 1.34
BUD23-207ENST00000430446 CCDC88BA6NC98 1476 aa23.45■■□□□ 1.34
BUD23-207ENST00000430446 KCNA4P22459 653 aa23.44■■□□□ 1.34
BUD23-207ENST00000430446 URB2Q14146 1524 aaKnown RBP23.26■■□□□ 1.31
BUD23-207ENST00000430446 ABCC8Q09428 1581 aa23.14■■□□□ 1.3
BUD23-207ENST00000430446 SUPT5HO00267 1087 aaKnown RBP23.12■■□□□ 1.29
BUD23-207ENST00000430446 TOPBP1Q92547 1522 aa23.1■■□□□ 1.29
BUD23-207ENST00000430446 SCAF1Q9H7N4 1312 aaKnown RBP23.08■■□□□ 1.29
BUD23-207ENST00000430446 DNMBPQ6XZF7 1577 aa23.08■■□□□ 1.29
BUD23-207ENST00000430446 IFT140Q96RY7 1462 aa23.06■■□□□ 1.28
BUD23-207ENST00000430446 NCBP3Q53F19 620 aaKnown RBP23.02■■□□□ 1.28
BUD23-207ENST00000430446 ZNF608Q9ULD9 1512 aaPredicted RBP22.92■■□□□ 1.26
BUD23-207ENST00000430446 EIF4G3O43432 1585 aaKnown RBP22.88■■□□□ 1.25
BUD23-207ENST00000430446 POLA1P09884 1462 aaPredicted RBP22.87■■□□□ 1.25
BUD23-207ENST00000430446 OSCARQ8IYS5 282 aa22.87■■□□□ 1.25
BUD23-207ENST00000430446 TARBP1Q13395 1621 aaKnown RBP22.85■■□□□ 1.25
BUD23-207ENST00000430446 CNKSR2Q8WXI2 1034 aa22.84■■□□□ 1.25
BUD23-207ENST00000430446 MAPK8IP2Q13387 824 aaPredicted RBP22.81■■□□□ 1.24
BUD23-207ENST00000430446 SOGA1O94964 1423 aa22.8■■□□□ 1.24
BUD23-207ENST00000430446 FGD5Q6ZNL6 1462 aa22.79■■□□□ 1.24
BUD23-207ENST00000430446 CUX1P39880 1505 aa22.79■■□□□ 1.24
BUD23-207ENST00000430446 AQRO60306 1485 aaKnown RBP eCLIP22.77■■□□□ 1.244e-7■■■■■ 28.5
BUD23-207ENST00000430446 RAD54L2Q9Y4B4 1467 aa22.77■■□□□ 1.24
BUD23-207ENST00000430446 NPM3O75607 178 aaKnown RBP22.74■■□□□ 1.23
BUD23-207ENST00000430446 WDR97A6NE52 1622 aa22.73■■□□□ 1.23
BUD23-207ENST00000430446 TDRD9Q8NDG6 1382 aaKnown RBP22.68■■□□□ 1.22
BUD23-207ENST00000430446 CHD1O14646 1710 aa22.66■■□□□ 1.22
BUD23-207ENST00000430446 TRIM41Q8WV44 630 aa22.65■■□□□ 1.22
BUD23-207ENST00000430446 FBLN2P98095 1184 aa22.64■■□□□ 1.21
BUD23-207ENST00000430446 GRIN2BQ13224 1484 aa22.59■■□□□ 1.21
BUD23-207ENST00000430446 WRNQ14191 1432 aaPredicted RBP eCLIP22.58■■□□□ 1.21
BUD23-207ENST00000430446 SNAPC4Q5SXM2 1469 aa22.58■■□□□ 1.2
BUD23-207ENST00000430446 MAGI1Q96QZ7 1491 aaPredicted RBP22.56■■□□□ 1.2
BUD23-207ENST00000430446 BIVM-ERCC5R4GMW8 1640 aa22.56■■□□□ 1.2
BUD23-207ENST00000430446 TOP2BQ02880 1626 aa22.55■■□□□ 1.2
BUD23-207ENST00000430446 ABCA10Q8WWZ4 1543 aa22.55■■□□□ 1.2
BUD23-207ENST00000430446 GAPVD1Q14C86 1478 aa22.54■■□□□ 1.2
BUD23-207ENST00000430446 PBRM1Q86U86 1689 aa22.54■■□□□ 1.2
BUD23-207ENST00000430446 CHMP7Q8WUX9 453 aaPredicted RBP22.52■■□□□ 1.2
BUD23-207ENST00000430446 RIMBP3CA6NJZ7 1639 aa22.52■■□□□ 1.2
BUD23-207ENST00000430446 RIMBP3BA6NNM3 1639 aa22.52■■□□□ 1.2
BUD23-207ENST00000430446 RIMBP3Q9UFD9 1639 aa22.52■■□□□ 1.2
BUD23-207ENST00000430446 SYNJ1O43426 1573 aa22.51■■□□□ 1.19
BUD23-207ENST00000430446 ABCA5Q8WWZ7 1642 aa22.49■■□□□ 1.19
BUD23-207ENST00000430446 ARHGEF11O15085 1522 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms