RNA–Protein interactions for RNA: ENST00000430270.5

BUD23-206, Transcript of BUD23, rRNA methyltransferase and ribosome maturation factor, humanhuman

TSL 5

Gene BUD23, Length 1,260 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BUD23-206ENST00000430270 NISCHQ9Y2I1 1504 aa47.72■■■■■ 5.23
BUD23-206ENST00000430270 ABCC9O60706 1549 aa43.42■■■■■ 4.54
BUD23-206ENST00000430270 CCDC180Q9P1Z9 1646 aa43.01■■■■■ 4.48
BUD23-206ENST00000430270 DNAJC5BQ9UF47 199 aa41.2■■■■■ 4.19
BUD23-206ENST00000430270 RB1CC1Q8TDY2 1594 aa41.12■■■■■ 4.17
BUD23-206ENST00000430270 NACADO15069 1562 aa40.74■■■■■ 4.11
BUD23-206ENST00000430270 DCAF8L2P0C7V8 631 aa40.34■■■■■ 4.05
BUD23-206ENST00000430270 PABPN1Q86U42 306 aaKnown RBP eCLIP40.34■■■■■ 4.056e-6■■□□□ 12
BUD23-206ENST00000430270 UNC13AQ9UPW8 1703 aa40.3■■■■■ 4.04
BUD23-206ENST00000430270 MYO15BQ96JP2 1530 aa40.07■■■■■ 4.01
BUD23-206ENST00000430270 BICRAQ9NZM4 1560 aa40.04■■■■■ 4
BUD23-206ENST00000430270 ZCCHC6Q5VYS8 1495 aaKnown RBP39.47■■■■□ 3.91
BUD23-206ENST00000430270 DCAF1Q9Y4B6 1507 aa39.4■■■■□ 3.9
BUD23-206ENST00000430270 SHROOM4Q9ULL8 1493 aa39.37■■■■□ 3.89
BUD23-206ENST00000430270 CC2D2AQ9P2K1 1620 aa39.23■■■■□ 3.87
BUD23-206ENST00000430270 SCRIBQ14160 1630 aa39.15■■■■□ 3.86
BUD23-206ENST00000430270 CECR2Q9BXF3 1484 aa39.15■■■■□ 3.86
BUD23-206ENST00000430270 EIF4G1Q04637 1599 aaKnown RBP39.04■■■■□ 3.84
BUD23-206ENST00000430270 DNAJC5Q9H3Z4 198 aa38.08■■■■□ 3.69
BUD23-206ENST00000430270 NCAPD3P42695 1498 aa37.64■■■■□ 3.62
BUD23-206ENST00000430270 CUX2O14529 1486 aa37.59■■■■□ 3.61
BUD23-206ENST00000430270 ATAD2BQ9ULI0 1458 aa37.47■■■■□ 3.59
BUD23-206ENST00000430270 ERCC6Q03468 1493 aa37.45■■■■□ 3.59
BUD23-206ENST00000430270 SMARCA4P51532 1647 aa37.33■■■■□ 3.57
BUD23-206ENST00000430270 HMGXB3Q12766 1538 aa37.32■■■■□ 3.57
BUD23-206ENST00000430270 SMARCA2P51531 1590 aa37.29■■■■□ 3.56
BUD23-206ENST00000430270 NESP48681 1621 aa37.21■■■■□ 3.55
BUD23-206ENST00000430270 BAZ1AQ9NRL2 1556 aaPredicted RBP37.04■■■■□ 3.52
BUD23-206ENST00000430270 BAZ1BQ9UIG0 1483 aaKnown RBP37.04■■■■□ 3.52
BUD23-206ENST00000430270 PEG3Q9GZU2 1588 aa37■■■■□ 3.51
BUD23-206ENST00000430270 THOC2Q8NI27 1593 aaKnown RBP36.95■■■■□ 3.51
BUD23-206ENST00000430270 LAMC3Q9Y6N6 1575 aa36.85■■■■□ 3.49
BUD23-206ENST00000430270 MROH2BQ7Z745 1585 aa36.78■■■■□ 3.48
BUD23-206ENST00000430270 KIF21AQ7Z4S6 1674 aa36.73■■■■□ 3.47
BUD23-206ENST00000430270 PDS5BQ9NTI5 1447 aa36.6■■■■□ 3.45
BUD23-206ENST00000430270 CADPSQ9ULU8 1353 aa36.45■■■■□ 3.43
BUD23-206ENST00000430270 MRC2Q9UBG0 1479 aa36.35■■■■□ 3.41
BUD23-206ENST00000430270 WIZO95785 1651 aa36.32■■■■□ 3.41
BUD23-206ENST00000430270 WDR62O43379 1518 aa36.31■■■■□ 3.4
BUD23-206ENST00000430270 TRIM41Q8WV44 630 aa36.16■■■■□ 3.38
BUD23-206ENST00000430270 CEP164Q9UPV0 1460 aa36.1■■■■□ 3.37
BUD23-206ENST00000430270 FANCD2Q9BXW9 1451 aa36.05■■■■□ 3.36
BUD23-206ENST00000430270 CFTRP13569 1480 aa35.97■■■■□ 3.35
BUD23-206ENST00000430270 RSF1Q96T23 1441 aaPredicted RBP35.85■■■■□ 3.33
BUD23-206ENST00000430270 URB2Q14146 1524 aaKnown RBP35.83■■■■□ 3.33
BUD23-206ENST00000430270 TOP2AP11388 1531 aaKnown RBP35.81■■■■□ 3.32
BUD23-206ENST00000430270 OSCARQ8IYS5 282 aa35.76■■■■□ 3.32
BUD23-206ENST00000430270 PRDM2Q13029 1718 aa35.6■■■■□ 3.29
BUD23-206ENST00000430270 ZNF608Q9ULD9 1512 aaPredicted RBP35.45■■■■□ 3.27
BUD23-206ENST00000430270 RIMBP3CA6NJZ7 1639 aa35.43■■■■□ 3.26
BUD23-206ENST00000430270 RIMBP3BA6NNM3 1639 aa35.43■■■■□ 3.26
BUD23-206ENST00000430270 RIMBP3Q9UFD9 1639 aa35.43■■■■□ 3.26
BUD23-206ENST00000430270 CCDC88BA6NC98 1476 aa35.41■■■■□ 3.26
BUD23-206ENST00000430270 IFT140Q96RY7 1462 aa35.41■■■■□ 3.26
BUD23-206ENST00000430270 TOPBP1Q92547 1522 aa35.33■■■■□ 3.25
BUD23-206ENST00000430270 ARHGEF11O15085 1522 aa35.26■■■■□ 3.23
BUD23-206ENST00000430270 EIF4G3O43432 1585 aaKnown RBP35.21■■■■□ 3.23
BUD23-206ENST00000430270 ABCC8Q09428 1581 aa35.17■■■■□ 3.22
BUD23-206ENST00000430270 DNMBPQ6XZF7 1577 aa35.15■■■■□ 3.22
BUD23-206ENST00000430270 TARBP1Q13395 1621 aaKnown RBP35.09■■■■□ 3.21
BUD23-206ENST00000430270 CHD1O14646 1710 aa35.05■■■■□ 3.2
BUD23-206ENST00000430270 AQRO60306 1485 aaKnown RBP eCLIP35.04■■■■□ 3.22e-7■■■■■ 31.1
BUD23-206ENST00000430270 CYB5RLQ6IPT4 315 aa34.96■■■■□ 3.19
BUD23-206ENST00000430270 POLA1P09884 1462 aaPredicted RBP34.95■■■■□ 3.19
BUD23-206ENST00000430270 ARAP1Q96P48 1450 aa34.9■■■■□ 3.18
BUD23-206ENST00000430270 RAD54L2Q9Y4B4 1467 aa34.83■■■■□ 3.17
BUD23-206ENST00000430270 FBLN2P98095 1184 aa34.8■■■■□ 3.16
BUD23-206ENST00000430270 TDRD9Q8NDG6 1382 aaKnown RBP34.74■■■■□ 3.15
BUD23-206ENST00000430270 SOGA1O94964 1423 aa34.73■■■■□ 3.15
BUD23-206ENST00000430270 SNAPC4Q5SXM2 1469 aa34.66■■■■□ 3.14
BUD23-206ENST00000430270 TRHP20396 242 aaPredicted RBP34.66■■■■□ 3.14
BUD23-206ENST00000430270 CLASP1Q7Z460 1538 aa34.65■■■■□ 3.14
BUD23-206ENST00000430270 FGD5Q6ZNL6 1462 aa34.65■■■■□ 3.14
BUD23-206ENST00000430270 WDR97A6NE52 1622 aa34.65■■■■□ 3.14
BUD23-206ENST00000430270 CUX1P39880 1505 aa34.58■■■■□ 3.13
BUD23-206ENST00000430270 MAGI1Q96QZ7 1491 aaPredicted RBP34.54■■■■□ 3.12
BUD23-206ENST00000430270 SYNJ1O43426 1573 aa34.52■■■■□ 3.12
BUD23-206ENST00000430270 CHMP7Q8WUX9 453 aaPredicted RBP34.49■■■■□ 3.11
BUD23-206ENST00000430270 GRIN2BQ13224 1484 aa34.49■■■■□ 3.11
BUD23-206ENST00000430270 SYNJ2O15056 1496 aa34.44■■■■□ 3.1
BUD23-206ENST00000430270 PBRM1Q86U86 1689 aa34.38■■■■□ 3.09
BUD23-206ENST00000430270 GAPVD1Q14C86 1478 aa34.32■■■■□ 3.08
BUD23-206ENST00000430270 ABCA5Q8WWZ7 1642 aa34.26■■■■□ 3.07
BUD23-206ENST00000430270 ABCA10Q8WWZ4 1543 aa34.25■■■■□ 3.07
BUD23-206ENST00000430270 ERCC6L2Q5T890 1561 aa34.1■■■■□ 3.05
BUD23-206ENST00000430270 GRIN2AQ12879 1464 aa34.07■■■■□ 3.04
BUD23-206ENST00000430270 ADAMTS12P58397 1594 aa34.02■■■■□ 3.04
BUD23-206ENST00000430270 CEP170Q5SW79 1584 aa34.01■■■■□ 3.03
BUD23-206ENST00000430270 NUP160Q12769 1436 aa33.99■■■■□ 3.03
BUD23-206ENST00000430270 WRNQ14191 1432 aaPredicted RBP eCLIP33.96■■■■□ 3.03
BUD23-206ENST00000430270 AEBP2Q6ZN18 517 aaPredicted RBP33.93■■■■□ 3.02
BUD23-206ENST00000430270 SHROOM2Q13796 1616 aa33.92■■■■□ 3.02
BUD23-206ENST00000430270 BIVM-ERCC5R4GMW8 1640 aa33.92■■■■□ 3.02
BUD23-206ENST00000430270 TOP2BQ02880 1626 aa33.9■■■■□ 3.02
BUD23-206ENST00000430270 FHAD1B1AJZ9 1412 aa33.86■■■■□ 3.01
BUD23-206ENST00000430270 SUPT5HO00267 1087 aaKnown RBP33.83■■■■□ 3.01
BUD23-206ENST00000430270 ERICH3Q5RHP9 1530 aa33.79■■■■□ 3
BUD23-206ENST00000430270 KIF13AQ9H1H9 1805 aa33.72■■■□□ 2.99
BUD23-206ENST00000430270 PRG4Q92954 1404 aaPredicted RBP33.66■■■□□ 2.98
BUD23-206ENST00000430270 JPH4Q96JJ6 628 aa33.59■■■□□ 2.97
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms