RNA–Protein interactions for RNA: ENST00000429804.7

CTCFL-207, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 3,864 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-207ENST00000429804 NISCHQ9Y2I1 1504 aa21.51■■□□□ 1.03
CTCFL-207ENST00000429804 SHROOM4Q9ULL8 1493 aa18.96■□□□□ 0.63
CTCFL-207ENST00000429804 SUPT5HO00267 1087 aaKnown RBP18.74■□□□□ 0.59
CTCFL-207ENST00000429804 DCAF8L2P0C7V8 631 aa18.59■□□□□ 0.57
CTCFL-207ENST00000429804 CCDC180Q9P1Z9 1646 aa18.3■□□□□ 0.52
CTCFL-207ENST00000429804 ZCCHC6Q5VYS8 1495 aaKnown RBP18.15■□□□□ 0.5
CTCFL-207ENST00000429804 CHIC1Q5VXU3 224 aa17.98■□□□□ 0.47
CTCFL-207ENST00000429804 PCGF6Q9BYE7 350 aa17.79■□□□□ 0.44
CTCFL-207ENST00000429804 MYO15BQ96JP2 1530 aa17.75■□□□□ 0.43
CTCFL-207ENST00000429804 HRCP23327 699 aa17.66■□□□□ 0.42
CTCFL-207ENST00000429804 LOC105371045A0A1W2PR82 267 aa17.61■□□□□ 0.41
CTCFL-207ENST00000429804 DCAF1Q9Y4B6 1507 aa17.57■□□□□ 0.4
CTCFL-207ENST00000429804 ABCC9O60706 1549 aa17.54■□□□□ 0.4
CTCFL-207ENST00000429804 PPARGC1BQ86YN6 1023 aaKnown RBP17.41■□□□□ 0.38
CTCFL-207ENST00000429804 EHMT2Q96KQ7 1210 aa17.4■□□□□ 0.38
CTCFL-207ENST00000429804 FAM9AQ8IZU1 332 aaPredicted RBP17.39■□□□□ 0.37
CTCFL-207ENST00000429804 TRIM41Q8WV44 630 aa17.35■□□□□ 0.37
CTCFL-207ENST00000429804 SCRIBQ14160 1630 aa17.27■□□□□ 0.35
CTCFL-207ENST00000429804 TRIM26Q12899 539 aaPredicted RBP17.26■□□□□ 0.35
CTCFL-207ENST00000429804 NACADO15069 1562 aa17.16■□□□□ 0.34
CTCFL-207ENST00000429804 RSF1Q96T23 1441 aaPredicted RBP17.16■□□□□ 0.34
CTCFL-207ENST00000429804 RB1CC1Q8TDY2 1594 aa17■□□□□ 0.31
CTCFL-207ENST00000429804 ZEB1P37275 1124 aaPredicted RBP16.96■□□□□ 0.31
CTCFL-207ENST00000429804 CECR2Q9BXF3 1484 aa16.89■□□□□ 0.29
CTCFL-207ENST00000429804 TTBK1Q5TCY1 1321 aaPredicted RBP16.84■□□□□ 0.29
CTCFL-207ENST00000429804 PABPN1Q86U42 306 aaKnown RBP eCLIP16.83■□□□□ 0.28
CTCFL-207ENST00000429804 MROH2BQ7Z745 1585 aa16.78■□□□□ 0.28
CTCFL-207ENST00000429804 CCER1Q8TC90 406 aaPredicted RBP16.73■□□□□ 0.27
CTCFL-207ENST00000429804 PELP1Q8IZL8 1130 aaKnown RBP16.72■□□□□ 0.27
CTCFL-207ENST00000429804 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.69■□□□□ 0.26
CTCFL-207ENST00000429804 WIZO95785 1651 aa16.67■□□□□ 0.26
CTCFL-207ENST00000429804 UBTFP17480 764 aaKnown RBP16.62■□□□□ 0.25
CTCFL-207ENST00000429804 BAZ1AQ9NRL2 1556 aaPredicted RBP16.62■□□□□ 0.25
CTCFL-207ENST00000429804 ABCC8Q09428 1581 aa16.45■□□□□ 0.22
CTCFL-207ENST00000429804 RANGAP1P46060 587 aaPredicted RBP16.45■□□□□ 0.22
CTCFL-207ENST00000429804 CSRNP3Q8WYN3 585 aa16.44■□□□□ 0.22
CTCFL-207ENST00000429804 CCDC88BA6NC98 1476 aa16.43■□□□□ 0.22
CTCFL-207ENST00000429804 SMARCA4P51532 1647 aa16.39■□□□□ 0.21
CTCFL-207ENST00000429804 SOGA1O94964 1423 aa16.38■□□□□ 0.21
CTCFL-207ENST00000429804 CEP162Q5TB80 1403 aa16.38■□□□□ 0.21
CTCFL-207ENST00000429804 TOP2AP11388 1531 aaKnown RBP16.36■□□□□ 0.21
CTCFL-207ENST00000429804 SCAF1Q9H7N4 1312 aaKnown RBP16.36■□□□□ 0.21
CTCFL-207ENST00000429804 DIEXFQ68CQ4 756 aaKnown RBP16.35■□□□□ 0.21
CTCFL-207ENST00000429804 APLP2Q06481 763 aa16.35■□□□□ 0.21
CTCFL-207ENST00000429804 HNRNPUL2Q1KMD3 747 aaKnown RBP16.32■□□□□ 0.2
CTCFL-207ENST00000429804 UNC13AQ9UPW8 1703 aa16.31■□□□□ 0.2
CTCFL-207ENST00000429804 MYT1Q01538 1121 aa16.29■□□□□ 0.2
CTCFL-207ENST00000429804 TNIKQ9UKE5 1360 aa16.28■□□□□ 0.2
CTCFL-207ENST00000429804 CENPBP07199 599 aaPredicted RBP16.27■□□□□ 0.2
CTCFL-207ENST00000429804 BICRAQ9NZM4 1560 aa16.27■□□□□ 0.19
CTCFL-207ENST00000429804 SMARCA2P51531 1590 aa16.26■□□□□ 0.19
CTCFL-207ENST00000429804 RUSC2Q8N2Y8 1516 aa16.25■□□□□ 0.19
CTCFL-207ENST00000429804 EEA1Q15075 1411 aa16.22■□□□□ 0.19
CTCFL-207ENST00000429804 WRNQ14191 1432 aaPredicted RBP eCLIP16.22■□□□□ 0.19
CTCFL-207ENST00000429804 BAZ1BQ9UIG0 1483 aaKnown RBP16.21■□□□□ 0.19
CTCFL-207ENST00000429804 ACIN1Q9UKV3 1341 aaKnown RBP16.21■□□□□ 0.19
CTCFL-207ENST00000429804 EIF4G1Q04637 1599 aaKnown RBP16.21■□□□□ 0.19
CTCFL-207ENST00000429804 NEUROD1Q13562 356 aa16.2■□□□□ 0.18
CTCFL-207ENST00000429804 YTHDC1Q96MU7 727 aaKnown RBP16.2■□□□□ 0.18
CTCFL-207ENST00000429804 GOLGA3Q08378 1498 aa16.19■□□□□ 0.18
CTCFL-207ENST00000429804 ATAD2BQ9ULI0 1458 aa16.15■□□□□ 0.18
CTCFL-207ENST00000429804 ZNF316A6NFI3 1004 aaPredicted RBP16.14■□□□□ 0.17
CTCFL-207ENST00000429804 GTF3C3Q9Y5Q9 886 aa16.13■□□□□ 0.17
CTCFL-207ENST00000429804 CLIP1P30622 1438 aa16.1■□□□□ 0.17
CTCFL-207ENST00000429804 CEP164Q9UPV0 1460 aa16.07■□□□□ 0.16
CTCFL-207ENST00000429804 PEG3Q9GZU2 1588 aa15.99■□□□□ 0.15
CTCFL-207ENST00000429804 SYNJ1O43426 1573 aa15.95■□□□□ 0.14
CTCFL-207ENST00000429804 ITGAEP38570 1179 aa15.95■□□□□ 0.14
CTCFL-207ENST00000429804 VPS8Q8N3P4 1428 aa15.94■□□□□ 0.14
CTCFL-207ENST00000429804 RAPGEF2Q9Y4G8 1499 aa15.94■□□□□ 0.14
CTCFL-207ENST00000429804 MIER1Q8N108 512 aa15.94■□□□□ 0.14
CTCFL-207ENST00000429804 NCAPD3P42695 1498 aa15.89■□□□□ 0.13
CTCFL-207ENST00000429804 KIF21BO75037 1637 aa15.84■□□□□ 0.13
CTCFL-207ENST00000429804 ATP1B4Q9UN42 357 aaPredicted RBP15.84■□□□□ 0.13
CTCFL-207ENST00000429804 KANK4Q5T7N3 995 aaPredicted RBP15.81■□□□□ 0.12
CTCFL-207ENST00000429804 HMGXB3Q12766 1538 aa15.79■□□□□ 0.12
CTCFL-207ENST00000429804 KIF27Q86VH2 1401 aa15.74■□□□□ 0.11
CTCFL-207ENST00000429804 P3H3Q8IVL6 736 aa15.69■□□□□ 0.1
CTCFL-207ENST00000429804 CADPSQ9ULU8 1353 aa15.69■□□□□ 0.1
CTCFL-207ENST00000429804 TOP2BQ02880 1626 aa15.69■□□□□ 0.1
CTCFL-207ENST00000429804 FAM50AQ14320 339 aaKnown RBP15.68■□□□□ 0.1
CTCFL-207ENST00000429804 DHX57Q6P158 1386 aaKnown RBP15.66■□□□□ 0.1
CTCFL-207ENST00000429804 CFTRP13569 1480 aa15.66■□□□□ 0.1
CTCFL-207ENST00000429804 CLSPNQ9HAW4 1339 aa15.64■□□□□ 0.09
CTCFL-207ENST00000429804 PRXQ9BXM0 1461 aa15.64■□□□□ 0.09
CTCFL-207ENST00000429804 ARAP1Q96P48 1450 aa15.63■□□□□ 0.09
CTCFL-207ENST00000429804 CCNB3Q8WWL7 1395 aa15.62■□□□□ 0.09
CTCFL-207ENST00000429804 CC2D2AQ9P2K1 1620 aa15.6■□□□□ 0.09
CTCFL-207ENST00000429804 ERICH3Q5RHP9 1530 aa15.6■□□□□ 0.09
CTCFL-207ENST00000429804 CUX1P39880 1505 aa15.59■□□□□ 0.09
CTCFL-207ENST00000429804 CUX2O14529 1486 aa15.59■□□□□ 0.09
CTCFL-207ENST00000429804 BIVM-ERCC5R4GMW8 1640 aa15.53■□□□□ 0.08
CTCFL-207ENST00000429804 CARMIL1Q5VZK9 1371 aa15.53■□□□□ 0.08
CTCFL-207ENST00000429804 ARHGAP35Q9NRY4 1499 aa15.52■□□□□ 0.07
CTCFL-207ENST00000429804 FANCD2Q9BXW9 1451 aa15.5■□□□□ 0.07
CTCFL-207ENST00000429804 RAB3GAP2Q9H2M9 1393 aa15.5■□□□□ 0.07
CTCFL-207ENST00000429804 IGF1RP08069 1367 aa15.49■□□□□ 0.07
CTCFL-207ENST00000429804 RRBP1Q9P2E9 1410 aaKnown RBP15.49■□□□□ 0.07
CTCFL-207ENST00000429804 SIN3AQ96ST3 1273 aa15.48■□□□□ 0.07
CTCFL-207ENST00000429804 DDX10Q13206 875 aaKnown RBP15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms