RNA–Protein interactions for RNA: ENST00000429709.6

ACTL6A-202, Transcript of actin like 6A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTL6A, Length 1,901 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTL6A-202ENST00000429709 NISCHQ9Y2I1 1504 aa34.53■■■■□ 3.12
ACTL6A-202ENST00000429709 CCDC180Q9P1Z9 1646 aa30.09■■■□□ 2.41
ACTL6A-202ENST00000429709 ZCCHC6Q5VYS8 1495 aaKnown RBP29.07■■■□□ 2.24
ACTL6A-202ENST00000429709 DCAF1Q9Y4B6 1507 aa28.6■■■□□ 2.17
ACTL6A-202ENST00000429709 DCAF8L2P0C7V8 631 aa28.3■■■□□ 2.12
ACTL6A-202ENST00000429709 SHROOM4Q9ULL8 1493 aa28.23■■■□□ 2.11
ACTL6A-202ENST00000429709 MYO15BQ96JP2 1530 aa28.19■■■□□ 2.1
ACTL6A-202ENST00000429709 ABCC9O60706 1549 aa28.13■■■□□ 2.09
ACTL6A-202ENST00000429709 NACADO15069 1562 aa27.92■■■□□ 2.06
ACTL6A-202ENST00000429709 RB1CC1Q8TDY2 1594 aa27.62■■■□□ 2.01
ACTL6A-202ENST00000429709 SCRIBQ14160 1630 aa27.62■■■□□ 2.01
ACTL6A-202ENST00000429709 SUPT5HO00267 1087 aaKnown RBP27.26■■□□□ 1.95
ACTL6A-202ENST00000429709 UNC13AQ9UPW8 1703 aa27.15■■□□□ 1.94
ACTL6A-202ENST00000429709 RSF1Q96T23 1441 aaPredicted RBP26.85■■□□□ 1.89
ACTL6A-202ENST00000429709 BICRAQ9NZM4 1560 aa26.79■■□□□ 1.88
ACTL6A-202ENST00000429709 CECR2Q9BXF3 1484 aa26.78■■□□□ 1.88
ACTL6A-202ENST00000429709 MROH2BQ7Z745 1585 aa26.67■■□□□ 1.86
ACTL6A-202ENST00000429709 BAZ1AQ9NRL2 1556 aaPredicted RBP26.66■■□□□ 1.86
ACTL6A-202ENST00000429709 SMARCA4P51532 1647 aa26.52■■□□□ 1.84
ACTL6A-202ENST00000429709 PABPN1Q86U42 306 aaKnown RBP eCLIP26.51■■□□□ 1.83
ACTL6A-202ENST00000429709 WIZO95785 1651 aa26.49■■□□□ 1.83
ACTL6A-202ENST00000429709 CHIC1Q5VXU3 224 aa26.26■■□□□ 1.79
ACTL6A-202ENST00000429709 TOP2AP11388 1531 aaKnown RBP26.23■■□□□ 1.79
ACTL6A-202ENST00000429709 PEG3Q9GZU2 1588 aa26.21■■□□□ 1.79
ACTL6A-202ENST00000429709 SMARCA2P51531 1590 aa26.02■■□□□ 1.76
ACTL6A-202ENST00000429709 ATAD2BQ9ULI0 1458 aa26■■□□□ 1.75
ACTL6A-202ENST00000429709 EIF4G1Q04637 1599 aaKnown RBP25.95■■□□□ 1.74
ACTL6A-202ENST00000429709 CCDC88BA6NC98 1476 aa25.93■■□□□ 1.74
ACTL6A-202ENST00000429709 BAZ1BQ9UIG0 1483 aaKnown RBP25.86■■□□□ 1.73
ACTL6A-202ENST00000429709 HMGXB3Q12766 1538 aa25.77■■□□□ 1.72
ACTL6A-202ENST00000429709 NCAPD3P42695 1498 aa25.74■■□□□ 1.71
ACTL6A-202ENST00000429709 TRIM41Q8WV44 630 aa25.63■■□□□ 1.69
ACTL6A-202ENST00000429709 CC2D2AQ9P2K1 1620 aa25.51■■□□□ 1.67
ACTL6A-202ENST00000429709 ABCC8Q09428 1581 aa25.45■■□□□ 1.67
ACTL6A-202ENST00000429709 WRNQ14191 1432 aaPredicted RBP eCLIP25.26■■□□□ 1.63
ACTL6A-202ENST00000429709 PRDM2Q13029 1718 aa25.25■■□□□ 1.63
ACTL6A-202ENST00000429709 CFTRP13569 1480 aa25.23■■□□□ 1.63
ACTL6A-202ENST00000429709 LOC105371045A0A1W2PR82 267 aa25.22■■□□□ 1.63
ACTL6A-202ENST00000429709 SYNJ1O43426 1573 aa25.18■■□□□ 1.62
ACTL6A-202ENST00000429709 FAM9AQ8IZU1 332 aaPredicted RBP25.13■■□□□ 1.61
ACTL6A-202ENST00000429709 TOP2BQ02880 1626 aa25.09■■□□□ 1.61
ACTL6A-202ENST00000429709 BIVM-ERCC5R4GMW8 1640 aa25.09■■□□□ 1.61
ACTL6A-202ENST00000429709 CADPSQ9ULU8 1353 aa25.07■■□□□ 1.6
ACTL6A-202ENST00000429709 EEA1Q15075 1411 aa25.06■■□□□ 1.6
ACTL6A-202ENST00000429709 SOGA1O94964 1423 aa25■■□□□ 1.59
ACTL6A-202ENST00000429709 CUX1P39880 1505 aa24.94■■□□□ 1.58
ACTL6A-202ENST00000429709 RUSC2Q8N2Y8 1516 aa24.89■■□□□ 1.58
ACTL6A-202ENST00000429709 LAMC3Q9Y6N6 1575 aa24.86■■□□□ 1.57
ACTL6A-202ENST00000429709 CSRNP3Q8WYN3 585 aa24.83■■□□□ 1.57
ACTL6A-202ENST00000429709 FANCD2Q9BXW9 1451 aa24.81■■□□□ 1.56
ACTL6A-202ENST00000429709 NESP48681 1621 aa24.77■■□□□ 1.56
ACTL6A-202ENST00000429709 KIF21BO75037 1637 aa24.75■■□□□ 1.55
ACTL6A-202ENST00000429709 EHMT2Q96KQ7 1210 aa24.73■■□□□ 1.55
ACTL6A-202ENST00000429709 GOLGA3Q08378 1498 aa24.7■■□□□ 1.54
ACTL6A-202ENST00000429709 DNAJC5BQ9UF47 199 aa24.69■■□□□ 1.54
ACTL6A-202ENST00000429709 CEP164Q9UPV0 1460 aa24.69■■□□□ 1.54
ACTL6A-202ENST00000429709 DNMBPQ6XZF7 1577 aa24.67■■□□□ 1.54
ACTL6A-202ENST00000429709 TNIKQ9UKE5 1360 aa24.66■■□□□ 1.54
ACTL6A-202ENST00000429709 FGD5Q6ZNL6 1462 aa24.62■■□□□ 1.53
ACTL6A-202ENST00000429709 PDS5BQ9NTI5 1447 aa24.62■■□□□ 1.53
ACTL6A-202ENST00000429709 KIF27Q86VH2 1401 aa24.61■■□□□ 1.53
ACTL6A-202ENST00000429709 TOPBP1Q92547 1522 aa24.58■■□□□ 1.53
ACTL6A-202ENST00000429709 KIF21AQ7Z4S6 1674 aa24.55■■□□□ 1.52
ACTL6A-202ENST00000429709 ERICH3Q5RHP9 1530 aa24.54■■□□□ 1.52
ACTL6A-202ENST00000429709 CEP162Q5TB80 1403 aa24.53■■□□□ 1.52
ACTL6A-202ENST00000429709 PRXQ9BXM0 1461 aa24.52■■□□□ 1.52
ACTL6A-202ENST00000429709 UBTFP17480 764 aaKnown RBP24.5■■□□□ 1.51
ACTL6A-202ENST00000429709 RAPGEF2Q9Y4G8 1499 aa24.5■■□□□ 1.51
ACTL6A-202ENST00000429709 URB2Q14146 1524 aaKnown RBP24.49■■□□□ 1.51
ACTL6A-202ENST00000429709 CUX2O14529 1486 aa24.49■■□□□ 1.51
ACTL6A-202ENST00000429709 POLA1P09884 1462 aaPredicted RBP24.47■■□□□ 1.51
ACTL6A-202ENST00000429709 ABCA10Q8WWZ4 1543 aa24.43■■□□□ 1.5
ACTL6A-202ENST00000429709 WDR97A6NE52 1622 aa24.39■■□□□ 1.49
ACTL6A-202ENST00000429709 RAD54L2Q9Y4B4 1467 aa24.36■■□□□ 1.49
ACTL6A-202ENST00000429709 IGF1RP08069 1367 aa24.35■■□□□ 1.49
ACTL6A-202ENST00000429709 MRC2Q9UBG0 1479 aa24.3■■□□□ 1.48
ACTL6A-202ENST00000429709 CLIP1P30622 1438 aa24.29■■□□□ 1.48
ACTL6A-202ENST00000429709 TRIM26Q12899 539 aaPredicted RBP24.29■■□□□ 1.48
ACTL6A-202ENST00000429709 PCGF6Q9BYE7 350 aa24.29■■□□□ 1.48
ACTL6A-202ENST00000429709 ABCA5Q8WWZ7 1642 aa24.24■■□□□ 1.47
ACTL6A-202ENST00000429709 CUL7Q14999 1698 aa24.24■■□□□ 1.47
ACTL6A-202ENST00000429709 CARMIL1Q5VZK9 1371 aa24.24■■□□□ 1.47
ACTL6A-202ENST00000429709 TARBP1Q13395 1621 aaKnown RBP24.23■■□□□ 1.47
ACTL6A-202ENST00000429709 WDR62O43379 1518 aa24.19■■□□□ 1.46
ACTL6A-202ENST00000429709 VPS8Q8N3P4 1428 aa24.13■■□□□ 1.45
ACTL6A-202ENST00000429709 GAPVD1Q14C86 1478 aa24.13■■□□□ 1.45
ACTL6A-202ENST00000429709 ERCC6Q03468 1493 aa24.1■■□□□ 1.45
ACTL6A-202ENST00000429709 TDRD9Q8NDG6 1382 aaKnown RBP24.08■■□□□ 1.45
ACTL6A-202ENST00000429709 THOC2Q8NI27 1593 aaKnown RBP24.08■■□□□ 1.45
ACTL6A-202ENST00000429709 PBRM1Q86U86 1689 aa24.05■■□□□ 1.44
ACTL6A-202ENST00000429709 ARAP1Q96P48 1450 aa24.05■■□□□ 1.44
ACTL6A-202ENST00000429709 IFT140Q96RY7 1462 aa24.04■■□□□ 1.44
ACTL6A-202ENST00000429709 CTTNBP2Q8WZ74 1663 aa24.02■■□□□ 1.44
ACTL6A-202ENST00000429709 ARHGAP35Q9NRY4 1499 aa23.99■■□□□ 1.43
ACTL6A-202ENST00000429709 RANGAP1P46060 587 aaPredicted RBP23.98■■□□□ 1.43
ACTL6A-202ENST00000429709 PPARGC1BQ86YN6 1023 aaKnown RBP23.98■■□□□ 1.43
ACTL6A-202ENST00000429709 AQRO60306 1485 aaKnown RBP eCLIP23.91■■□□□ 1.422e-6■■■■■ 30.5
ACTL6A-202ENST00000429709 GRIN2BQ13224 1484 aa23.91■■□□□ 1.42
ACTL6A-202ENST00000429709 ADAMTS12P58397 1594 aa23.9■■□□□ 1.42
ACTL6A-202ENST00000429709 ZNF608Q9ULD9 1512 aaPredicted RBP23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms