RNA–Protein interactions for RNA: ENST00000429205.6

SENP3-202, Transcript of SUMO specific peptidase 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SENP3, Length 2,222 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-202ENST00000429205 NISCHQ9Y2I1 1504 aa29.33■■■□□ 2.29
SENP3-202ENST00000429205 CCDC180Q9P1Z9 1646 aa25.44■■□□□ 1.66
SENP3-202ENST00000429205 ZCCHC6Q5VYS8 1495 aaKnown RBP24.67■■□□□ 1.54
SENP3-202ENST00000429205 DCAF8L2P0C7V8 631 aa24.35■■□□□ 1.49
SENP3-202ENST00000429205 SHROOM4Q9ULL8 1493 aa24.2■■□□□ 1.46
SENP3-202ENST00000429205 DCAF1Q9Y4B6 1507 aa24.18■■□□□ 1.46
SENP3-202ENST00000429205 ABCC9O60706 1549 aa24.13■■□□□ 1.45
SENP3-202ENST00000429205 MYO15BQ96JP2 1530 aa23.82■■□□□ 1.4
SENP3-202ENST00000429205 PELP1Q8IZL8 1130 aaKnown RBP23.78■■□□□ 1.4
SENP3-202ENST00000429205 NACADO15069 1562 aa23.67■■□□□ 1.38
SENP3-202ENST00000429205 MYT1Q01538 1121 aa23.63■■□□□ 1.37
SENP3-202ENST00000429205 SCRIBQ14160 1630 aa23.57■■□□□ 1.36
SENP3-202ENST00000429205 RB1CC1Q8TDY2 1594 aa23.48■■□□□ 1.35
SENP3-202ENST00000429205 SUPT5HO00267 1087 aaKnown RBP23.36■■□□□ 1.33
SENP3-202ENST00000429205 UNC13AQ9UPW8 1703 aa23.08■■□□□ 1.29
SENP3-202ENST00000429205 TTBK1Q5TCY1 1321 aaPredicted RBP22.91■■□□□ 1.26
SENP3-202ENST00000429205 RSF1Q96T23 1441 aaPredicted RBP22.87■■□□□ 1.25
SENP3-202ENST00000429205 CECR2Q9BXF3 1484 aa22.86■■□□□ 1.25
SENP3-202ENST00000429205 PABPN1Q86U42 306 aaKnown RBP eCLIP22.81■■□□□ 1.24
SENP3-202ENST00000429205 BICRAQ9NZM4 1560 aa22.8■■□□□ 1.24
SENP3-202ENST00000429205 MROH2BQ7Z745 1585 aa22.71■■□□□ 1.23
SENP3-202ENST00000429205 BAZ1AQ9NRL2 1556 aaPredicted RBP22.61■■□□□ 1.21
SENP3-202ENST00000429205 WIZO95785 1651 aa22.54■■□□□ 1.2
SENP3-202ENST00000429205 SMARCA4P51532 1647 aa22.52■■□□□ 1.2
SENP3-202ENST00000429205 CHIC1Q5VXU3 224 aa22.4■■□□□ 1.18
SENP3-202ENST00000429205 TOP2AP11388 1531 aaKnown RBP22.24■■□□□ 1.15
SENP3-202ENST00000429205 PEG3Q9GZU2 1588 aa22.18■■□□□ 1.14
SENP3-202ENST00000429205 ATAD2BQ9ULI0 1458 aa22.13■■□□□ 1.13
SENP3-202ENST00000429205 EIF4G1Q04637 1599 aaKnown RBP22.12■■□□□ 1.13
SENP3-202ENST00000429205 CCDC88BA6NC98 1476 aa22.08■■□□□ 1.13
SENP3-202ENST00000429205 SMARCA2P51531 1590 aa22.07■■□□□ 1.12
SENP3-202ENST00000429205 BAZ1BQ9UIG0 1483 aaKnown RBP22.02■■□□□ 1.12
SENP3-202ENST00000429205 TRIM41Q8WV44 630 aa21.9■■□□□ 1.1
SENP3-202ENST00000429205 NCAPD3P42695 1498 aa21.89■■□□□ 1.09
SENP3-202ENST00000429205 HMGXB3Q12766 1538 aa21.84■■□□□ 1.09
SENP3-202ENST00000429205 CC2D2AQ9P2K1 1620 aa21.79■■□□□ 1.08
SENP3-202ENST00000429205 ABCC8Q09428 1581 aa21.7■■□□□ 1.06
SENP3-202ENST00000429205 LOC105371045A0A1W2PR82 267 aa21.61■■□□□ 1.05
SENP3-202ENST00000429205 ERICH6Q7L0X2 663 aa21.6■■□□□ 1.05
SENP3-202ENST00000429205 FAM9AQ8IZU1 332 aaPredicted RBP21.57■■□□□ 1.04
SENP3-202ENST00000429205 WRNQ14191 1432 aaPredicted RBP eCLIP21.5■■□□□ 1.03
SENP3-202ENST00000429205 PRKCSHP14314 528 aaPredicted RBP21.49■■□□□ 1.03
SENP3-202ENST00000429205 CFTRP13569 1480 aa21.46■■□□□ 1.03
SENP3-202ENST00000429205 APLP2Q06481 763 aa21.46■■□□□ 1.03
SENP3-202ENST00000429205 SLC24A1O60721 1099 aa21.45■■□□□ 1.03
SENP3-202ENST00000429205 HRCP23327 699 aa21.41■■□□□ 1.02
SENP3-202ENST00000429205 SYNJ1O43426 1573 aa21.4■■□□□ 1.02
SENP3-202ENST00000429205 CADPSQ9ULU8 1353 aa21.37■■□□□ 1.01
SENP3-202ENST00000429205 SOGA1O94964 1423 aa21.34■■□□□ 1.01
SENP3-202ENST00000429205 EHMT2Q96KQ7 1210 aa21.33■■□□□ 1
SENP3-202ENST00000429205 PRDM2Q13029 1718 aa21.32■■□□□ 1
SENP3-202ENST00000429205 DNAJC5BQ9UF47 199 aa21.3■■□□□ 1
SENP3-202ENST00000429205 TOP2BQ02880 1626 aa21.26■□□□□ 0.99
SENP3-202ENST00000429205 RUSC2Q8N2Y8 1516 aa21.26■□□□□ 0.99
SENP3-202ENST00000429205 NESP48681 1621 aa21.22■□□□□ 0.99
SENP3-202ENST00000429205 CUX1P39880 1505 aa21.21■□□□□ 0.99
SENP3-202ENST00000429205 BIVM-ERCC5R4GMW8 1640 aa21.21■□□□□ 0.99
SENP3-202ENST00000429205 EEA1Q15075 1411 aa21.21■□□□□ 0.99
SENP3-202ENST00000429205 CSRNP3Q8WYN3 585 aa21.18■□□□□ 0.98
SENP3-202ENST00000429205 FANCD2Q9BXW9 1451 aa21.14■□□□□ 0.97
SENP3-202ENST00000429205 LAMC3Q9Y6N6 1575 aa21.11■□□□□ 0.97
SENP3-202ENST00000429205 CEP164Q9UPV0 1460 aa21■□□□□ 0.95
SENP3-202ENST00000429205 GOLGA3Q08378 1498 aa20.97■□□□□ 0.95
SENP3-202ENST00000429205 FGD5Q6ZNL6 1462 aa20.96■□□□□ 0.95
SENP3-202ENST00000429205 UBTFP17480 764 aaKnown RBP20.96■□□□□ 0.95
SENP3-202ENST00000429205 PDS5BQ9NTI5 1447 aa20.95■□□□□ 0.95
SENP3-202ENST00000429205 TNIKQ9UKE5 1360 aa20.95■□□□□ 0.94
SENP3-202ENST00000429205 KIF21AQ7Z4S6 1674 aa20.94■□□□□ 0.94
SENP3-202ENST00000429205 DNMBPQ6XZF7 1577 aa20.94■□□□□ 0.94
SENP3-202ENST00000429205 KIF27Q86VH2 1401 aa20.93■□□□□ 0.94
SENP3-202ENST00000429205 KIF21BO75037 1637 aa20.92■□□□□ 0.94
SENP3-202ENST00000429205 BCL11AQ9H165 835 aa20.92■□□□□ 0.94
SENP3-202ENST00000429205 TOPBP1Q92547 1522 aa20.92■□□□□ 0.94
SENP3-202ENST00000429205 SCAF1Q9H7N4 1312 aaKnown RBP20.88■□□□□ 0.93
SENP3-202ENST00000429205 URB2Q14146 1524 aaKnown RBP20.88■□□□□ 0.93
SENP3-202ENST00000429205 RAPGEF2Q9Y4G8 1499 aa20.88■□□□□ 0.93
SENP3-202ENST00000429205 CEP162Q5TB80 1403 aa20.88■□□□□ 0.93
SENP3-202ENST00000429205 CUX2O14529 1486 aa20.87■□□□□ 0.93
SENP3-202ENST00000429205 PPARGC1BQ86YN6 1023 aaKnown RBP20.86■□□□□ 0.93
SENP3-202ENST00000429205 POLA1P09884 1462 aaPredicted RBP20.84■□□□□ 0.93
SENP3-202ENST00000429205 PRXQ9BXM0 1461 aa20.84■□□□□ 0.93
SENP3-202ENST00000429205 PCGF6Q9BYE7 350 aa20.82■□□□□ 0.92
SENP3-202ENST00000429205 RAD54L2Q9Y4B4 1467 aa20.81■□□□□ 0.92
SENP3-202ENST00000429205 IGF1RP08069 1367 aa20.77■□□□□ 0.92
SENP3-202ENST00000429205 ERICH3Q5RHP9 1530 aa20.76■□□□□ 0.91
SENP3-202ENST00000429205 ABCA10Q8WWZ4 1543 aa20.74■□□□□ 0.91
SENP3-202ENST00000429205 DAXXQ9UER7 740 aaPredicted RBP20.72■□□□□ 0.91
SENP3-202ENST00000429205 MRC2Q9UBG0 1479 aa20.7■□□□□ 0.9
SENP3-202ENST00000429205 CLIP1P30622 1438 aa20.68■□□□□ 0.9
SENP3-202ENST00000429205 WDR97A6NE52 1622 aa20.67■□□□□ 0.9
SENP3-202ENST00000429205 ERCC6Q03468 1493 aa20.66■□□□□ 0.9
SENP3-202ENST00000429205 CARMIL1Q5VZK9 1371 aa20.66■□□□□ 0.9
SENP3-202ENST00000429205 TRIM26Q12899 539 aaPredicted RBP20.66■□□□□ 0.9
SENP3-202ENST00000429205 RANGAP1P46060 587 aaPredicted RBP20.65■□□□□ 0.9
SENP3-202ENST00000429205 TDRD9Q8NDG6 1382 aaKnown RBP20.62■□□□□ 0.89
SENP3-202ENST00000429205 TARBP1Q13395 1621 aaKnown RBP20.58■□□□□ 0.89
SENP3-202ENST00000429205 WDR62O43379 1518 aa20.58■□□□□ 0.88
SENP3-202ENST00000429205 ABCA5Q8WWZ7 1642 aa20.57■□□□□ 0.88
SENP3-202ENST00000429205 GAPVD1Q14C86 1478 aa20.54■□□□□ 0.88
SENP3-202ENST00000429205 THOC2Q8NI27 1593 aaKnown RBP20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms