RNA–Protein interactions for RNA: ENST00000428425.1

NCBP2-205, Transcript of nuclear cap binding protein subunit 2, humanhuman

TSL 1 (best)

Gene NCBP2, Length 2,220 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2-205ENST00000428425 NISCHQ9Y2I1 1504 aa30.24■■■□□ 2.43
NCBP2-205ENST00000428425 CCDC180Q9P1Z9 1646 aa25.99■■□□□ 1.75
NCBP2-205ENST00000428425 ZCCHC6Q5VYS8 1495 aaKnown RBP25.5■■□□□ 1.67
NCBP2-205ENST00000428425 SHROOM4Q9ULL8 1493 aa25.33■■□□□ 1.65
NCBP2-205ENST00000428425 DCAF8L2P0C7V8 631 aa25.06■■□□□ 1.6
NCBP2-205ENST00000428425 ABCC9O60706 1549 aa24.94■■□□□ 1.58
NCBP2-205ENST00000428425 DCAF1Q9Y4B6 1507 aa24.84■■□□□ 1.57
NCBP2-205ENST00000428425 SUPT5HO00267 1087 aaKnown RBP24.56■■□□□ 1.52
NCBP2-205ENST00000428425 MYO15BQ96JP2 1530 aa24.31■■□□□ 1.48
NCBP2-205ENST00000428425 SCRIBQ14160 1630 aa24.24■■□□□ 1.47
NCBP2-205ENST00000428425 NACADO15069 1562 aa24.11■■□□□ 1.45
NCBP2-205ENST00000428425 RB1CC1Q8TDY2 1594 aa23.99■■□□□ 1.43
NCBP2-205ENST00000428425 RSF1Q96T23 1441 aaPredicted RBP23.72■■□□□ 1.39
NCBP2-205ENST00000428425 CHIC1Q5VXU3 224 aa23.68■■□□□ 1.38
NCBP2-205ENST00000428425 CECR2Q9BXF3 1484 aa23.62■■□□□ 1.37
NCBP2-205ENST00000428425 UNC13AQ9UPW8 1703 aa23.52■■□□□ 1.35
NCBP2-205ENST00000428425 MROH2BQ7Z745 1585 aa23.5■■□□□ 1.35
NCBP2-205ENST00000428425 WIZO95785 1651 aa23.34■■□□□ 1.33
NCBP2-205ENST00000428425 PABPN1Q86U42 306 aaKnown RBP eCLIP23.32■■□□□ 1.32
NCBP2-205ENST00000428425 BAZ1AQ9NRL2 1556 aaPredicted RBP23.25■■□□□ 1.31
NCBP2-205ENST00000428425 BICRAQ9NZM4 1560 aa23.25■■□□□ 1.31
NCBP2-205ENST00000428425 SMARCA4P51532 1647 aa23.16■■□□□ 1.3
NCBP2-205ENST00000428425 DNAJC5BQ9UF47 199 aa23.09■■□□□ 1.29
NCBP2-205ENST00000428425 TOP2AP11388 1531 aaKnown RBP22.97■■□□□ 1.27
NCBP2-205ENST00000428425 LOC105371045A0A1W2PR82 267 aa22.94■■□□□ 1.26
NCBP2-205ENST00000428425 TRIM41Q8WV44 630 aa22.92■■□□□ 1.26
NCBP2-205ENST00000428425 EIF4G1Q04637 1599 aaKnown RBP22.87■■□□□ 1.25
NCBP2-205ENST00000428425 CCDC88BA6NC98 1476 aa22.84■■□□□ 1.25
NCBP2-205ENST00000428425 SMARCA2P51531 1590 aa22.84■■□□□ 1.25
NCBP2-205ENST00000428425 PEG3Q9GZU2 1588 aa22.75■■□□□ 1.23
NCBP2-205ENST00000428425 FAM9AQ8IZU1 332 aaPredicted RBP22.7■■□□□ 1.23
NCBP2-205ENST00000428425 ATAD2BQ9ULI0 1458 aa22.66■■□□□ 1.22
NCBP2-205ENST00000428425 ABCC8Q09428 1581 aa22.63■■□□□ 1.21
NCBP2-205ENST00000428425 BAZ1BQ9UIG0 1483 aaKnown RBP22.55■■□□□ 1.2
NCBP2-205ENST00000428425 CC2D2AQ9P2K1 1620 aa22.55■■□□□ 1.2
NCBP2-205ENST00000428425 EHMT2Q96KQ7 1210 aa22.51■■□□□ 1.19
NCBP2-205ENST00000428425 PCGF6Q9BYE7 350 aa22.37■■□□□ 1.17
NCBP2-205ENST00000428425 NCAPD3P42695 1498 aa22.3■■□□□ 1.16
NCBP2-205ENST00000428425 SOGA1O94964 1423 aa22.29■■□□□ 1.16
NCBP2-205ENST00000428425 HMGXB3Q12766 1538 aa22.29■■□□□ 1.16
NCBP2-205ENST00000428425 WRNQ14191 1432 aaPredicted RBP eCLIP22.28■■□□□ 1.16
NCBP2-205ENST00000428425 SYNJ1O43426 1573 aa22.24■■□□□ 1.15
NCBP2-205ENST00000428425 RUSC2Q8N2Y8 1516 aa22.23■■□□□ 1.15
NCBP2-205ENST00000428425 TRIM26Q12899 539 aaPredicted RBP22.06■■□□□ 1.12
NCBP2-205ENST00000428425 CSRNP3Q8WYN3 585 aa22.06■■□□□ 1.12
NCBP2-205ENST00000428425 EEA1Q15075 1411 aa22.05■■□□□ 1.12
NCBP2-205ENST00000428425 HRCP23327 699 aa22.03■■□□□ 1.12
NCBP2-205ENST00000428425 TOP2BQ02880 1626 aa22■■□□□ 1.11
NCBP2-205ENST00000428425 CFTRP13569 1480 aa21.99■■□□□ 1.11
NCBP2-205ENST00000428425 BIVM-ERCC5R4GMW8 1640 aa21.95■■□□□ 1.1
NCBP2-205ENST00000428425 CEP162Q5TB80 1403 aa21.93■■□□□ 1.1
NCBP2-205ENST00000428425 PPARGC1BQ86YN6 1023 aaKnown RBP21.92■■□□□ 1.1
NCBP2-205ENST00000428425 TNIKQ9UKE5 1360 aa21.92■■□□□ 1.1
NCBP2-205ENST00000428425 CUX1P39880 1505 aa21.91■■□□□ 1.1
NCBP2-205ENST00000428425 GOLGA3Q08378 1498 aa21.9■■□□□ 1.1
NCBP2-205ENST00000428425 UBTFP17480 764 aaKnown RBP21.88■■□□□ 1.09
NCBP2-205ENST00000428425 KIF21BO75037 1637 aa21.84■■□□□ 1.09
NCBP2-205ENST00000428425 CEP164Q9UPV0 1460 aa21.83■■□□□ 1.09
NCBP2-205ENST00000428425 PRDM2Q13029 1718 aa21.83■■□□□ 1.08
NCBP2-205ENST00000428425 CADPSQ9ULU8 1353 aa21.82■■□□□ 1.08
NCBP2-205ENST00000428425 RAPGEF2Q9Y4G8 1499 aa21.78■■□□□ 1.08
NCBP2-205ENST00000428425 TTBK1Q5TCY1 1321 aaPredicted RBP21.65■■□□□ 1.06
NCBP2-205ENST00000428425 NESP48681 1621 aa21.65■■□□□ 1.06
NCBP2-205ENST00000428425 PRXQ9BXM0 1461 aa21.64■■□□□ 1.05
NCBP2-205ENST00000428425 CLIP1P30622 1438 aa21.62■■□□□ 1.05
NCBP2-205ENST00000428425 FANCD2Q9BXW9 1451 aa21.62■■□□□ 1.05
NCBP2-205ENST00000428425 KIF27Q86VH2 1401 aa21.62■■□□□ 1.05
NCBP2-205ENST00000428425 RANGAP1P46060 587 aaPredicted RBP21.59■■□□□ 1.05
NCBP2-205ENST00000428425 FGD5Q6ZNL6 1462 aa21.58■■□□□ 1.04
NCBP2-205ENST00000428425 ERICH3Q5RHP9 1530 aa21.57■■□□□ 1.04
NCBP2-205ENST00000428425 CUX2O14529 1486 aa21.54■■□□□ 1.04
NCBP2-205ENST00000428425 LAMC3Q9Y6N6 1575 aa21.52■■□□□ 1.04
NCBP2-205ENST00000428425 ERCC6Q03468 1493 aa21.51■■□□□ 1.03
NCBP2-205ENST00000428425 VPS8Q8N3P4 1428 aa21.47■■□□□ 1.03
NCBP2-205ENST00000428425 DNMBPQ6XZF7 1577 aa21.45■■□□□ 1.03
NCBP2-205ENST00000428425 IGF1RP08069 1367 aa21.45■■□□□ 1.02
NCBP2-205ENST00000428425 TOPBP1Q92547 1522 aa21.44■■□□□ 1.02
NCBP2-205ENST00000428425 PDS5BQ9NTI5 1447 aa21.43■■□□□ 1.02
NCBP2-205ENST00000428425 RAD54L2Q9Y4B4 1467 aa21.42■■□□□ 1.02
NCBP2-205ENST00000428425 POLA1P09884 1462 aaPredicted RBP21.4■■□□□ 1.02
NCBP2-205ENST00000428425 ARAP1Q96P48 1450 aa21.39■■□□□ 1.01
NCBP2-205ENST00000428425 URB2Q14146 1524 aaKnown RBP21.37■■□□□ 1.01
NCBP2-205ENST00000428425 CARMIL1Q5VZK9 1371 aa21.33■■□□□ 1
NCBP2-205ENST00000428425 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.32■■□□□ 1
NCBP2-205ENST00000428425 ABCA10Q8WWZ4 1543 aa21.31■■□□□ 1
NCBP2-205ENST00000428425 KIF21AQ7Z4S6 1674 aa21.3■■□□□ 1
NCBP2-205ENST00000428425 ZEB1P37275 1124 aaPredicted RBP21.29■■□□□ 1
NCBP2-205ENST00000428425 ARHGAP35Q9NRY4 1499 aa21.28■■□□□ 1
NCBP2-205ENST00000428425 THOC2Q8NI27 1593 aaKnown RBP21.23■□□□□ 0.99
NCBP2-205ENST00000428425 APLP2Q06481 763 aa21.23■□□□□ 0.99
NCBP2-205ENST00000428425 WDR97A6NE52 1622 aa21.22■□□□□ 0.99
NCBP2-205ENST00000428425 MRC2Q9UBG0 1479 aa21.18■□□□□ 0.98
NCBP2-205ENST00000428425 CCER1Q8TC90 406 aaPredicted RBP21.18■□□□□ 0.98
NCBP2-205ENST00000428425 TDRD9Q8NDG6 1382 aaKnown RBP21.16■□□□□ 0.98
NCBP2-205ENST00000428425 KANK4Q5T7N3 995 aaPredicted RBP21.16■□□□□ 0.98
NCBP2-205ENST00000428425 ABCA5Q8WWZ7 1642 aa21.13■□□□□ 0.97
NCBP2-205ENST00000428425 CUL7Q14999 1698 aa21.11■□□□□ 0.97
NCBP2-205ENST00000428425 HNRNPUL2Q1KMD3 747 aaKnown RBP21.11■□□□□ 0.97
NCBP2-205ENST00000428425 WDR62O43379 1518 aa21.1■□□□□ 0.97
NCBP2-205ENST00000428425 TARBP1Q13395 1621 aaKnown RBP21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms