RNA–Protein interactions for RNA: ENST00000428221.5

E2F6-204, Transcript of E2F transcription factor 6, humanhuman

TSL 1 (best)

Gene E2F6, Length 3,139 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E2F6-204ENST00000428221 NISCHQ9Y2I1 1504 aa33.37■■■□□ 2.93
E2F6-204ENST00000428221 CCDC180Q9P1Z9 1646 aa28.48■■■□□ 2.15
E2F6-204ENST00000428221 SHROOM4Q9ULL8 1493 aa28.3■■■□□ 2.12
E2F6-204ENST00000428221 ZCCHC6Q5VYS8 1495 aaKnown RBP28.13■■■□□ 2.09
E2F6-204ENST00000428221 DCAF8L2P0C7V8 631 aa27.97■■■□□ 2.07
E2F6-204ENST00000428221 SUPT5HO00267 1087 aaKnown RBP27.54■■■□□ 2
E2F6-204ENST00000428221 DCAF1Q9Y4B6 1507 aa27.29■■□□□ 1.96
E2F6-204ENST00000428221 ABCC9O60706 1549 aa26.93■■□□□ 1.9
E2F6-204ENST00000428221 SCRIBQ14160 1630 aa26.77■■□□□ 1.88
E2F6-204ENST00000428221 MYO15BQ96JP2 1530 aa26.64■■□□□ 1.86
E2F6-204ENST00000428221 CHIC1Q5VXU3 224 aa26.5■■□□□ 1.83
E2F6-204ENST00000428221 NACADO15069 1562 aa26.47■■□□□ 1.83
E2F6-204ENST00000428221 RSF1Q96T23 1441 aaPredicted RBP26.27■■□□□ 1.8
E2F6-204ENST00000428221 HRCP23327 699 aa26.21■■□□□ 1.79
E2F6-204ENST00000428221 PCGF6Q9BYE7 350 aa26.15■■□□□ 1.78
E2F6-204ENST00000428221 RB1CC1Q8TDY2 1594 aa26.15■■□□□ 1.78
E2F6-204ENST00000428221 CECR2Q9BXF3 1484 aa26.13■■□□□ 1.77
E2F6-204ENST00000428221 PPARGC1BQ86YN6 1023 aaKnown RBP26.11■■□□□ 1.77
E2F6-204ENST00000428221 MROH2BQ7Z745 1585 aa25.97■■□□□ 1.75
E2F6-204ENST00000428221 WIZO95785 1651 aa25.81■■□□□ 1.72
E2F6-204ENST00000428221 UNC13AQ9UPW8 1703 aa25.78■■□□□ 1.72
E2F6-204ENST00000428221 LOC105371045A0A1W2PR82 267 aa25.77■■□□□ 1.72
E2F6-204ENST00000428221 PABPN1Q86U42 306 aaKnown RBP eCLIP25.72■■□□□ 1.71
E2F6-204ENST00000428221 BAZ1AQ9NRL2 1556 aaPredicted RBP25.64■■□□□ 1.69
E2F6-204ENST00000428221 TRIM41Q8WV44 630 aa25.62■■□□□ 1.69
E2F6-204ENST00000428221 SMARCA4P51532 1647 aa25.5■■□□□ 1.67
E2F6-204ENST00000428221 FAM9AQ8IZU1 332 aaPredicted RBP25.49■■□□□ 1.67
E2F6-204ENST00000428221 BICRAQ9NZM4 1560 aa25.49■■□□□ 1.67
E2F6-204ENST00000428221 EHMT2Q96KQ7 1210 aa25.36■■□□□ 1.65
E2F6-204ENST00000428221 TOP2AP11388 1531 aaKnown RBP25.33■■□□□ 1.65
E2F6-204ENST00000428221 CCDC88BA6NC98 1476 aa25.27■■□□□ 1.64
E2F6-204ENST00000428221 SMARCA2P51531 1590 aa25.21■■□□□ 1.63
E2F6-204ENST00000428221 EIF4G1Q04637 1599 aaKnown RBP25.2■■□□□ 1.62
E2F6-204ENST00000428221 ABCC8Q09428 1581 aa25.11■■□□□ 1.61
E2F6-204ENST00000428221 TRIM26Q12899 539 aaPredicted RBP25.04■■□□□ 1.6
E2F6-204ENST00000428221 PEG3Q9GZU2 1588 aa24.97■■□□□ 1.59
E2F6-204ENST00000428221 ATAD2BQ9ULI0 1458 aa24.97■■□□□ 1.59
E2F6-204ENST00000428221 BAZ1BQ9UIG0 1483 aaKnown RBP24.88■■□□□ 1.57
E2F6-204ENST00000428221 SCAF1Q9H7N4 1312 aaKnown RBP24.8■■□□□ 1.56
E2F6-204ENST00000428221 SOGA1O94964 1423 aa24.79■■□□□ 1.56
E2F6-204ENST00000428221 RUSC2Q8N2Y8 1516 aa24.71■■□□□ 1.55
E2F6-204ENST00000428221 WRNQ14191 1432 aaPredicted RBP eCLIP24.69■■□□□ 1.54
E2F6-204ENST00000428221 SYNJ1O43426 1573 aa24.59■■□□□ 1.53
E2F6-204ENST00000428221 CSRNP3Q8WYN3 585 aa24.58■■□□□ 1.53
E2F6-204ENST00000428221 ZEB1P37275 1124 aaPredicted RBP24.56■■□□□ 1.52
E2F6-204ENST00000428221 PELP1Q8IZL8 1130 aaKnown RBP24.56■■□□□ 1.52
E2F6-204ENST00000428221 NCAPD3P42695 1498 aa24.53■■□□□ 1.52
E2F6-204ENST00000428221 UBTFP17480 764 aaKnown RBP24.49■■□□□ 1.51
E2F6-204ENST00000428221 HMGXB3Q12766 1538 aa24.45■■□□□ 1.51
E2F6-204ENST00000428221 EEA1Q15075 1411 aa24.44■■□□□ 1.5
E2F6-204ENST00000428221 CEP162Q5TB80 1403 aa24.43■■□□□ 1.5
E2F6-204ENST00000428221 TTBK1Q5TCY1 1321 aaPredicted RBP24.41■■□□□ 1.5
E2F6-204ENST00000428221 TNIKQ9UKE5 1360 aa24.38■■□□□ 1.49
E2F6-204ENST00000428221 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.36■■□□□ 1.49
E2F6-204ENST00000428221 GOLGA3Q08378 1498 aa24.32■■□□□ 1.48
E2F6-204ENST00000428221 TOP2BQ02880 1626 aa24.28■■□□□ 1.48
E2F6-204ENST00000428221 NEUROD1Q13562 356 aa24.27■■□□□ 1.48
E2F6-204ENST00000428221 RANGAP1P46060 587 aaPredicted RBP24.23■■□□□ 1.47
E2F6-204ENST00000428221 CFTRP13569 1480 aa24.23■■□□□ 1.47
E2F6-204ENST00000428221 CEP164Q9UPV0 1460 aa24.22■■□□□ 1.47
E2F6-204ENST00000428221 CCER1Q8TC90 406 aaPredicted RBP24.21■■□□□ 1.47
E2F6-204ENST00000428221 CC2D2AQ9P2K1 1620 aa24.19■■□□□ 1.46
E2F6-204ENST00000428221 CUX1P39880 1505 aa24.19■■□□□ 1.46
E2F6-204ENST00000428221 RAPGEF2Q9Y4G8 1499 aa24.19■■□□□ 1.46
E2F6-204ENST00000428221 BIVM-ERCC5R4GMW8 1640 aa24.17■■□□□ 1.46
E2F6-204ENST00000428221 ACIN1Q9UKV3 1341 aaKnown RBP24.16■■□□□ 1.46
E2F6-204ENST00000428221 KIF21BO75037 1637 aa24.16■■□□□ 1.46
E2F6-204ENST00000428221 GTF3C3Q9Y5Q9 886 aa24.13■■□□□ 1.45
E2F6-204ENST00000428221 CLIP1P30622 1438 aa24.07■■□□□ 1.44
E2F6-204ENST00000428221 CADPSQ9ULU8 1353 aa24.06■■□□□ 1.44
E2F6-204ENST00000428221 DIEXFQ68CQ4 756 aaKnown RBP24.01■■□□□ 1.43
E2F6-204ENST00000428221 KIF27Q86VH2 1401 aa23.94■■□□□ 1.42
E2F6-204ENST00000428221 PRXQ9BXM0 1461 aa23.94■■□□□ 1.42
E2F6-204ENST00000428221 YTHDC1Q96MU7 727 aaKnown RBP23.93■■□□□ 1.42
E2F6-204ENST00000428221 PRDM2Q13029 1718 aa23.92■■□□□ 1.42
E2F6-204ENST00000428221 NESP48681 1621 aa23.87■■□□□ 1.41
E2F6-204ENST00000428221 VPS8Q8N3P4 1428 aa23.87■■□□□ 1.41
E2F6-204ENST00000428221 CENPBP07199 599 aaPredicted RBP23.87■■□□□ 1.41
E2F6-204ENST00000428221 DNAJC5BQ9UF47 199 aa23.87■■□□□ 1.41
E2F6-204ENST00000428221 CUX2O14529 1486 aa23.85■■□□□ 1.41
E2F6-204ENST00000428221 ERICH3Q5RHP9 1530 aa23.84■■□□□ 1.41
E2F6-204ENST00000428221 FANCD2Q9BXW9 1451 aa23.84■■□□□ 1.41
E2F6-204ENST00000428221 FGD5Q6ZNL6 1462 aa23.83■■□□□ 1.41
E2F6-204ENST00000428221 APLP2Q06481 763 aa23.79■■□□□ 1.4
E2F6-204ENST00000428221 IGF1RP08069 1367 aa23.76■■□□□ 1.39
E2F6-204ENST00000428221 ARAP1Q96P48 1450 aa23.72■■□□□ 1.39
E2F6-204ENST00000428221 HNRNPUL2Q1KMD3 747 aaKnown RBP23.72■■□□□ 1.39
E2F6-204ENST00000428221 RAD54L2Q9Y4B4 1467 aa23.69■■□□□ 1.38
E2F6-204ENST00000428221 CARMIL1Q5VZK9 1371 aa23.65■■□□□ 1.38
E2F6-204ENST00000428221 MYT1Q01538 1121 aa23.63■■□□□ 1.37
E2F6-204ENST00000428221 TOPBP1Q92547 1522 aa23.63■■□□□ 1.37
E2F6-204ENST00000428221 KANK4Q5T7N3 995 aaPredicted RBP23.62■■□□□ 1.37
E2F6-204ENST00000428221 DNMBPQ6XZF7 1577 aa23.61■■□□□ 1.37
E2F6-204ENST00000428221 POLA1P09884 1462 aaPredicted RBP23.6■■□□□ 1.37
E2F6-204ENST00000428221 ARHGAP35Q9NRY4 1499 aa23.6■■□□□ 1.37
E2F6-204ENST00000428221 URB2Q14146 1524 aaKnown RBP23.53■■□□□ 1.36
E2F6-204ENST00000428221 LAMC3Q9Y6N6 1575 aa23.52■■□□□ 1.36
E2F6-204ENST00000428221 ZNF316A6NFI3 1004 aaPredicted RBP23.5■■□□□ 1.35
E2F6-204ENST00000428221 P3H3Q8IVL6 736 aa23.5■■□□□ 1.35
E2F6-204ENST00000428221 ABCA10Q8WWZ4 1543 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms